RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 THEMISQ8N1K5 641 aaPredicted RBP16.31■□□□□ 0.2
FOXN3-212ENST00000556541 TONSLQ96HA7 1378 aa16.3■□□□□ 0.2
FOXN3-212ENST00000556541 POLR1AO95602 1720 aaPredicted RBP16.29■□□□□ 0.2
FOXN3-212ENST00000556541 KIAA1210Q9ULL0 1709 aa16.28■□□□□ 0.2
FOXN3-212ENST00000556541 HDGFP51858 240 aaKnown RBP16.28■□□□□ 0.2
FOXN3-212ENST00000556541 RIMS2Q9UQ26 1411 aa16.28■□□□□ 0.2
FOXN3-212ENST00000556541 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
FOXN3-212ENST00000556541 STAG3Q9UJ98 1225 aa16.27■□□□□ 0.2
FOXN3-212ENST00000556541 LAMC1P11047 1609 aa16.27■□□□□ 0.19
FOXN3-212ENST00000556541 ZEB1P37275 1124 aaPredicted RBP16.26■□□□□ 0.19
FOXN3-212ENST00000556541 MED14O60244 1454 aa16.26■□□□□ 0.19
FOXN3-212ENST00000556541 SCAF11Q99590 1463 aaKnown RBP16.25■□□□□ 0.19
FOXN3-212ENST00000556541 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
FOXN3-212ENST00000556541 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
FOXN3-212ENST00000556541 SETBP1Q9Y6X0 1596 aa16.25■□□□□ 0.19
FOXN3-212ENST00000556541 VGFO15240 615 aaPredicted RBP16.24■□□□□ 0.19
FOXN3-212ENST00000556541 DIP2AQ14689 1571 aa16.23■□□□□ 0.19
FOXN3-212ENST00000556541 PIK3C2GO75747 1445 aa16.23■□□□□ 0.19
FOXN3-212ENST00000556541 CHGAP10645 457 aaKnown RBP16.23■□□□□ 0.19
FOXN3-212ENST00000556541 PLPPR3Q6T4P5 718 aa16.23■□□□□ 0.19
FOXN3-212ENST00000556541 PRAG1Q86YV5 1406 aa16.22■□□□□ 0.19
FOXN3-212ENST00000556541 PLEKHG1Q9ULL1 1385 aa16.22■□□□□ 0.19
FOXN3-212ENST00000556541 NRXN3Q9Y4C0 1643 aa16.21■□□□□ 0.19
FOXN3-212ENST00000556541 RGL3Q3MIN7 710 aa16.21■□□□□ 0.19
FOXN3-212ENST00000556541 ZNF326Q5BKZ1 582 aaKnown RBP16.21■□□□□ 0.19
FOXN3-212ENST00000556541 TRPM1Q7Z4N2 1603 aa16.2■□□□□ 0.18
FOXN3-212ENST00000556541 SETD1AO15047 1707 aaKnown RBP16.2■□□□□ 0.18
FOXN3-212ENST00000556541 EID1Q9Y6B2 187 aa16.2■□□□□ 0.18
FOXN3-212ENST00000556541 STRCQ7RTU9 1775 aa16.19■□□□□ 0.18
FOXN3-212ENST00000556541 IQGAP1P46940 1657 aa16.19■□□□□ 0.18
FOXN3-212ENST00000556541 PPP1R15AO75807 674 aaPredicted RBP16.19■□□□□ 0.18
FOXN3-212ENST00000556541 ANKLE2Q86XL3 938 aa16.19■□□□□ 0.18
FOXN3-212ENST00000556541 DCAF11Q8TEB1 546 aa16.19■□□□□ 0.18
FOXN3-212ENST00000556541 RALGAPBQ86X10 1494 aa16.17■□□□□ 0.18
FOXN3-212ENST00000556541 LTKP29376 864 aa16.16■□□□□ 0.18
FOXN3-212ENST00000556541 TXNDC2Q86VQ3 553 aa16.16■□□□□ 0.18
FOXN3-212ENST00000556541 ADGRF5Q8IZF2 1346 aa16.16■□□□□ 0.18
FOXN3-212ENST00000556541 ALKQ9UM73 1620 aa16.16■□□□□ 0.18
FOXN3-212ENST00000556541 GPRASP1Q5JY77 1395 aa16.15■□□□□ 0.18
FOXN3-212ENST00000556541 ILDR2Q71H61 639 aa16.15■□□□□ 0.18
FOXN3-212ENST00000556541 NPHP4O75161 1426 aaPredicted RBP16.14■□□□□ 0.17
FOXN3-212ENST00000556541 ADAMTS13Q76LX8 1427 aa16.14■□□□□ 0.17
FOXN3-212ENST00000556541 C14orf93Q9H972 538 aaKnown RBP16.14■□□□□ 0.17
FOXN3-212ENST00000556541 PIK3R4Q99570 1358 aa16.13■□□□□ 0.17
FOXN3-212ENST00000556541 ADGRB1O14514 1584 aa16.13■□□□□ 0.17
FOXN3-212ENST00000556541 KNDC1Q76NI1 1749 aa16.11■□□□□ 0.17
FOXN3-212ENST00000556541 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
FOXN3-212ENST00000556541 TBX22Q9Y458 520 aa16.11■□□□□ 0.17
FOXN3-212ENST00000556541 NBPF8Q3BBV2 869 aa16.1■□□□□ 0.17
FOXN3-212ENST00000556541 KDM2AQ9Y2K7 1162 aa16.1■□□□□ 0.17
FOXN3-212ENST00000556541 CHD2O14647 1828 aaKnown RBP16.1■□□□□ 0.17
FOXN3-212ENST00000556541 ASXL1Q8IXJ9 1541 aa16.09■□□□□ 0.17
FOXN3-212ENST00000556541 NWD1Q149M9 1564 aa16.09■□□□□ 0.17
FOXN3-212ENST00000556541 HSPA2P54652 639 aa16.08■□□□□ 0.16
FOXN3-212ENST00000556541 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
FOXN3-212ENST00000556541 TECPR2O15040 1411 aa16.07■□□□□ 0.16
FOXN3-212ENST00000556541 DLC1Q96QB1 1528 aa16.07■□□□□ 0.16
FOXN3-212ENST00000556541 XRN1Q8IZH2 1706 aaKnown RBP16.07■□□□□ 0.16
FOXN3-212ENST00000556541 SOCS7O14512 581 aa16.06■□□□□ 0.16
FOXN3-212ENST00000556541 NCKAP5LQ9HCH0 1330 aa16.05■□□□□ 0.16
FOXN3-212ENST00000556541 NUTM2DQ5VT03 806 aaPredicted RBP16.05■□□□□ 0.16
FOXN3-212ENST00000556541 CPS1P31327 1500 aa16.04■□□□□ 0.16
FOXN3-212ENST00000556541 ROCK2O75116 1388 aaKnown RBP16.04■□□□□ 0.16
FOXN3-212ENST00000556541 LRPPRCP42704 1394 aaKnown RBP16.04■□□□□ 0.16
FOXN3-212ENST00000556541 DISP3Q9P2K9 1392 aa16.04■□□□□ 0.16
FOXN3-212ENST00000556541 CFAP70Q5T0N1 1121 aa16.04■□□□□ 0.16
FOXN3-212ENST00000556541 ABCC11Q96J66 1382 aa16.03■□□□□ 0.16
FOXN3-212ENST00000556541 ARHGEF28Q8N1W1 1705 aaKnown RBP16.03■□□□□ 0.16
FOXN3-212ENST00000556541 SIRT1Q96EB6 747 aa16.03■□□□□ 0.16
FOXN3-212ENST00000556541 PTCH1Q13635 1447 aa16.02■□□□□ 0.16
FOXN3-212ENST00000556541 YTHDC2Q9H6S0 1430 aaKnown RBP16.02■□□□□ 0.16
FOXN3-212ENST00000556541 NKTRP30414 1462 aaKnown RBP16.02■□□□□ 0.15
FOXN3-212ENST00000556541 METP08581 1390 aa16.01■□□□□ 0.15
FOXN3-212ENST00000556541 FAM135BQ49AJ0 1406 aa16.01■□□□□ 0.15
FOXN3-212ENST00000556541 NBPF1Q3BBV0 1214 aa15.99■□□□□ 0.15
FOXN3-212ENST00000556541 CERKQ8TCT0 537 aa15.99■□□□□ 0.15
FOXN3-212ENST00000556541 PTPRUQ92729 1446 aa15.99■□□□□ 0.15
FOXN3-212ENST00000556541 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
FOXN3-212ENST00000556541 SBNO2Q9Y2G9 1366 aa15.98■□□□□ 0.15
FOXN3-212ENST00000556541 KCNA6P17658 529 aa15.97■□□□□ 0.15
FOXN3-212ENST00000556541 BCANQ96GW7 911 aa15.97■□□□□ 0.15
FOXN3-212ENST00000556541 SLC26A8Q96RN1 970 aa15.97■□□□□ 0.15
FOXN3-212ENST00000556541 CARD11Q9BXL7 1154 aa15.97■□□□□ 0.15
FOXN3-212ENST00000556541 STRCP1A6NGW2 1772 aa15.97■□□□□ 0.15
FOXN3-212ENST00000556541 NCOA3Q9Y6Q9 1424 aa15.96■□□□□ 0.15
FOXN3-212ENST00000556541 SLC24A1O60721 1099 aa15.95■□□□□ 0.14
FOXN3-212ENST00000556541 USP47Q96K76 1375 aa15.94■□□□□ 0.14
FOXN3-212ENST00000556541 ADGRB2O60241 1585 aa15.94■□□□□ 0.14
FOXN3-212ENST00000556541 QRICH2Q9H0J4 1663 aa15.93■□□□□ 0.14
FOXN3-212ENST00000556541 TMEM132EQ6IEE7 984 aa15.93■□□□□ 0.14
FOXN3-212ENST00000556541 AMOTL2Q9Y2J4 779 aa15.92■□□□□ 0.14
FOXN3-212ENST00000556541 EIF4G2P78344 907 aaKnown RBP eCLIP15.91■□□□□ 0.14
FOXN3-212ENST00000556541 ROBO2Q9HCK4 1378 aa15.9■□□□□ 0.14
FOXN3-212ENST00000556541 LTBP4Q8N2S1 1624 aa15.9■□□□□ 0.14
FOXN3-212ENST00000556541 CENPJQ9HC77 1338 aaPredicted RBP15.89■□□□□ 0.13
FOXN3-212ENST00000556541 XIRP1Q702N8 1843 aaKnown RBP15.89■□□□□ 0.13
FOXN3-212ENST00000556541 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.88■□□□□ 0.13
FOXN3-212ENST00000556541 TRAK1Q9UPV9 953 aa15.87■□□□□ 0.13
FOXN3-212ENST00000556541 NALCNQ8IZF0 1738 aa15.87■□□□□ 0.13
FOXN3-212ENST00000556541 CDC42BPGQ6DT37 1551 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms