RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 BHMG1C9JSJ3 638 aaPredicted RBP9.8□□□□□ -0.84
PCNX1-212ENST00000556516 POTEGQ6S5H5 508 aa9.8□□□□□ -0.84
PCNX1-212ENST00000556516 DDRGK1Q96HY6 314 aa9.8□□□□□ -0.84
PCNX1-212ENST00000556516 RNF40O75150 1001 aa9.79□□□□□ -0.84
PCNX1-212ENST00000556516 FAM98CQ17RN3 349 aaKnown RBP9.79□□□□□ -0.84
PCNX1-212ENST00000556516 SAMD7Q7Z3H4 446 aa9.79□□□□□ -0.84
PCNX1-212ENST00000556516 TK2O00142 265 aa9.78□□□□□ -0.84
PCNX1-212ENST00000556516 RDH13Q8NBN7 331 aa9.78□□□□□ -0.84
PCNX1-212ENST00000556516 NBPF3Q9H094 633 aa9.78□□□□□ -0.84
PCNX1-212ENST00000556516 POTEMA6NI47 508 aa9.77□□□□□ -0.85
PCNX1-212ENST00000556516 HRO43593 1189 aa9.77□□□□□ -0.85
PCNX1-212ENST00000556516 MRPL50Q8N5N7 158 aaKnown RBP9.77□□□□□ -0.85
PCNX1-212ENST00000556516 ZFRQ96KR1 1074 aaKnown RBP9.76□□□□□ -0.85
PCNX1-212ENST00000556516 SLC10A3P09131 477 aa9.75□□□□□ -0.85
PCNX1-212ENST00000556516 CD46P15529 392 aa9.75□□□□□ -0.85
PCNX1-212ENST00000556516 GTF3C3Q9Y5Q9 886 aa9.75□□□□□ -0.85
PCNX1-212ENST00000556516 SULF1Q8IWU6 871 aa9.73□□□□□ -0.85
PCNX1-212ENST00000556516 CDAN1Q8IWY9 1227 aa9.73□□□□□ -0.85
PCNX1-212ENST00000556516 POLR3EQ9NVU0 708 aa9.73□□□□□ -0.85
PCNX1-212ENST00000556516 LAPTM4BQ86VI4 370 aa9.72□□□□□ -0.85
PCNX1-212ENST00000556516 TBC1D2Q9BYX2 928 aa9.72□□□□□ -0.85
PCNX1-212ENST00000556516 BCAMP50895 628 aa9.71□□□□□ -0.86
PCNX1-212ENST00000556516 STAC3Q96MF2 364 aa9.71□□□□□ -0.86
PCNX1-212ENST00000556516 MYSM1Q5VVJ2 828 aa9.7□□□□□ -0.86
PCNX1-212ENST00000556516 SPIRE2Q8WWL2 714 aa9.7□□□□□ -0.86
PCNX1-212ENST00000556516 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
PCNX1-212ENST00000556516 GOLGA8CPA6NN73 597 aa9.69□□□□□ -0.86
PCNX1-212ENST00000556516 HDGFP51858 240 aaKnown RBP9.69□□□□□ -0.86
PCNX1-212ENST00000556516 PROCA1Q8NCQ7 364 aaPredicted RBP9.69□□□□□ -0.86
PCNX1-212ENST00000556516 HLA-CQ95604 372 aa9.69□□□□□ -0.86
PCNX1-212ENST00000556516 CFHP08603 1231 aa9.68□□□□□ -0.86
PCNX1-212ENST00000556516 SH3D19Q5HYK7 790 aa9.68□□□□□ -0.86
PCNX1-212ENST00000556516 LRCH3Q96II8 777 aa9.68□□□□□ -0.86
PCNX1-212ENST00000556516 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.68□□□□□ -0.86
PCNX1-212ENST00000556516 NDUFV2P19404 249 aa9.67□□□□□ -0.86
PCNX1-212ENST00000556516 GUCA2AQ02747 115 aa9.67□□□□□ -0.86
PCNX1-212ENST00000556516 NUTM1Q86Y26 1132 aa9.67□□□□□ -0.86
PCNX1-212ENST00000556516 SLF2Q8IX21 1173 aa9.67□□□□□ -0.86
PCNX1-212ENST00000556516 WNT2BQ93097 391 aa9.67□□□□□ -0.86
PCNX1-212ENST00000556516 LIMD1Q9UGP4 676 aa9.67□□□□□ -0.86
PCNX1-212ENST00000556516 MOXD2PA6NHM9 499 aa9.66□□□□□ -0.86
PCNX1-212ENST00000556516 GCGRP47871 477 aa9.66□□□□□ -0.86
PCNX1-212ENST00000556516 CSPP1Q1MSJ5 1256 aa9.66□□□□□ -0.86
PCNX1-212ENST00000556516 ANKK1Q8NFD2 765 aa9.66□□□□□ -0.86
PCNX1-212ENST00000556516 FBXO31Q5XUX0 539 aaPredicted RBP9.65□□□□□ -0.86
PCNX1-212ENST00000556516 PCMTD1Q96MG8 357 aaPredicted RBP9.65□□□□□ -0.86
PCNX1-212ENST00000556516 HPS5Q9UPZ3 1129 aa9.65□□□□□ -0.86
PCNX1-212ENST00000556516 KDM4AO75164 1064 aa9.64□□□□□ -0.87
PCNX1-212ENST00000556516 CLK2P49760 499 aaKnown RBP9.64□□□□□ -0.87
PCNX1-212ENST00000556516 SKIV2LQ15477 1246 aaKnown RBP9.64□□□□□ -0.87
PCNX1-212ENST00000556516 KCTD12Q96CX2 325 aaKnown RBP9.64□□□□□ -0.87
PCNX1-212ENST00000556516 RSPH6AQ9H0K4 717 aa9.64□□□□□ -0.87
PCNX1-212ENST00000556516 SOWAHBA6NEL2 793 aa9.63□□□□□ -0.87
PCNX1-212ENST00000556516 FUT2Q10981 343 aa9.63□□□□□ -0.87
PCNX1-212ENST00000556516 RIC3Q7Z5B4 369 aa9.63□□□□□ -0.87
PCNX1-212ENST00000556516 SLC4A3P48751 1232 aa9.62□□□□□ -0.87
PCNX1-212ENST00000556516 RSPH4AQ5TD94 716 aa9.62□□□□□ -0.87
PCNX1-212ENST00000556516 HOXA2O43364 376 aa9.61□□□□□ -0.87
PCNX1-212ENST00000556516 PUS10Q3MIT2 529 aaKnown RBP9.61□□□□□ -0.87
PCNX1-212ENST00000556516 RSBN1LQ6PCB5 846 aaPredicted RBP9.61□□□□□ -0.87
PCNX1-212ENST00000556516 GOPCQ9HD26 462 aa9.61□□□□□ -0.87
PCNX1-212ENST00000556516 PCDHB15Q9Y5E8 787 aa9.61□□□□□ -0.87
PCNX1-212ENST00000556516 APLP1P51693 650 aa9.6□□□□□ -0.87
PCNX1-212ENST00000556516 WBP1LQ9NX94 342 aa9.6□□□□□ -0.87
PCNX1-212ENST00000556516 TIMELESSQ9UNS1 1208 aa9.6□□□□□ -0.87
PCNX1-212ENST00000556516 PPP4CP60510 307 aa9.59□□□□□ -0.87
PCNX1-212ENST00000556516 QPCTQ16769 361 aa9.59□□□□□ -0.87
PCNX1-212ENST00000556516 CABLES1Q8TDN4 633 aa9.59□□□□□ -0.87
PCNX1-212ENST00000556516 THSD4Q6ZMP0 1018 aa9.58□□□□□ -0.88
PCNX1-212ENST00000556516 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.58□□□□□ -0.88
PCNX1-212ENST00000556516 PCDHGC3Q9UN70 934 aa9.58□□□□□ -0.88
PCNX1-212ENST00000556516 SPTLC1O15269 473 aa9.57□□□□□ -0.88
PCNX1-212ENST00000556516 DIXDC1Q155Q3 683 aa9.57□□□□□ -0.88
PCNX1-212ENST00000556516 TSR3Q9UJK0 312 aaKnown RBP9.57□□□□□ -0.88
PCNX1-212ENST00000556516 FDX1P10109 184 aa9.56□□□□□ -0.88
PCNX1-212ENST00000556516 PTPN5P54829 565 aa9.56□□□□□ -0.88
PCNX1-212ENST00000556516 KMT5BQ4FZB7 885 aa9.56□□□□□ -0.88
PCNX1-212ENST00000556516 SYMPKQ92797 1274 aaKnown RBP9.56□□□□□ -0.88
PCNX1-212ENST00000556516 USP46P62068 366 aa9.55□□□□□ -0.88
PCNX1-212ENST00000556516 RTL5Q5HYW3 569 aaPredicted RBP9.54□□□□□ -0.88
PCNX1-212ENST00000556516 ACTN4O43707 911 aaKnown RBP9.53□□□□□ -0.88
PCNX1-212ENST00000556516 ATP6V1AP38606 617 aa9.53□□□□□ -0.88
PCNX1-212ENST00000556516 NUTM2BA6NNL0 878 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-212ENST00000556516 NUTM2EB1AL46 878 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-212ENST00000556516 HRCP23327 699 aa9.52□□□□□ -0.89
PCNX1-212ENST00000556516 RFC5P40937 340 aa9.52□□□□□ -0.89
PCNX1-212ENST00000556516 NUTM2DQ5VT03 806 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-212ENST00000556516 C14orf37Q86TY3 774 aa9.52□□□□□ -0.89
PCNX1-212ENST00000556516 NUTM2AQ8IVF1 878 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-212ENST00000556516 MYT1LQ9UL68 1186 aa9.52□□□□□ -0.89
PCNX1-212ENST00000556516 SLC27A5Q9Y2P5 690 aa9.52□□□□□ -0.89
PCNX1-212ENST00000556516 LILRB3O75022 631 aa9.51□□□□□ -0.89
PCNX1-212ENST00000556516 MORN1Q5T089 497 aa9.51□□□□□ -0.89
PCNX1-212ENST00000556516 BLOC1S3Q6QNY0 202 aa9.51□□□□□ -0.89
PCNX1-212ENST00000556516 C6orf229H3BNL8 230 aa9.5□□□□□ -0.89
PCNX1-212ENST00000556516 COPS2P61201 443 aa9.5□□□□□ -0.89
PCNX1-212ENST00000556516 PCDHB3Q9Y5E6 796 aa9.5□□□□□ -0.89
PCNX1-212ENST00000556516 GRIPAP1Q4V328 841 aa9.49□□□□□ -0.89
PCNX1-212ENST00000556516 RNF19BQ6ZMZ0 732 aa9.49□□□□□ -0.89
PCNX1-212ENST00000556516 TSC1Q92574 1164 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms