RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 MYBBP1AQ9BQG0 1328 aaKnown RBP7.34□□□□□ -1.23
GPHN-213ENST00000556501 RALBP1Q15311 655 aa7.34□□□□□ -1.23
GPHN-213ENST00000556501 POLR3GLQ9BT43 218 aa7.34□□□□□ -1.23
GPHN-213ENST00000556501 MYOM2P54296 1465 aa7.34□□□□□ -1.23
GPHN-213ENST00000556501 MROH2AA6NES4 1674 aa7.34□□□□□ -1.23
GPHN-213ENST00000556501 ABCA6Q8N139 1617 aa7.34□□□□□ -1.24
GPHN-213ENST00000556501 MAP3K4Q9Y6R4 1608 aa7.34□□□□□ -1.24
GPHN-213ENST00000556501 KANK1Q14678 1352 aa7.33□□□□□ -1.24
GPHN-213ENST00000556501 ZNF518AQ6AHZ1 1483 aa7.33□□□□□ -1.24
GPHN-213ENST00000556501 MYO3AQ8NEV4 1616 aa7.33□□□□□ -1.24
GPHN-213ENST00000556501 HECW2Q9P2P5 1572 aa7.33□□□□□ -1.24
GPHN-213ENST00000556501 INSRP06213 1382 aa7.33□□□□□ -1.24
GPHN-213ENST00000556501 SCAF11Q99590 1463 aaKnown RBP7.32□□□□□ -1.24
GPHN-213ENST00000556501 NBPF1Q3BBV0 1214 aa7.32□□□□□ -1.24
GPHN-213ENST00000556501 RGL3Q3MIN7 710 aa7.32□□□□□ -1.24
GPHN-213ENST00000556501 PNISRQ8TF01 805 aaKnown RBP7.32□□□□□ -1.24
GPHN-213ENST00000556501 STAC3Q96MF2 364 aa7.32□□□□□ -1.24
GPHN-213ENST00000556501 TESK2Q96S53 571 aa7.32□□□□□ -1.24
GPHN-213ENST00000556501 FRMPD1Q5SYB0 1578 aa7.32□□□□□ -1.24
GPHN-213ENST00000556501 ADGRB3O60242 1522 aa7.32□□□□□ -1.24
GPHN-213ENST00000556501 KDM5AP29375 1690 aaKnown RBP7.32□□□□□ -1.24
GPHN-213ENST00000556501 WASHC2CQ9Y4E1 1318 aa7.31□□□□□ -1.24
GPHN-213ENST00000556501 MYT1Q01538 1121 aa7.31□□□□□ -1.24
GPHN-213ENST00000556501 POGZQ7Z3K3 1410 aa7.31□□□□□ -1.24
GPHN-213ENST00000556501 AFAP1Q8N556 730 aa7.31□□□□□ -1.24
GPHN-213ENST00000556501 PPP4R2Q9NY27 417 aa7.31□□□□□ -1.24
GPHN-213ENST00000556501 NUDCQ9Y266 331 aa7.31□□□□□ -1.24
GPHN-213ENST00000556501 NRXN1Q9ULB1 1477 aa7.3□□□□□ -1.24
GPHN-213ENST00000556501 RNF123Q5XPI4 1314 aa7.3□□□□□ -1.24
GPHN-213ENST00000556501 UGGT1Q9NYU2 1555 aa7.3□□□□□ -1.24
GPHN-213ENST00000556501 BLMP54132 1417 aaPredicted RBP7.3□□□□□ -1.24
GPHN-213ENST00000556501 SAMD1Q6SPF0 538 aaPredicted RBP7.3□□□□□ -1.24
GPHN-213ENST00000556501 NLRP13Q86W25 1043 aa7.3□□□□□ -1.24
GPHN-213ENST00000556501 TMC1Q8TDI8 760 aa7.3□□□□□ -1.24
GPHN-213ENST00000556501 FBXO3Q9UK99 471 aa7.3□□□□□ -1.24
GPHN-213ENST00000556501 ZC3H13Q5T200 1668 aaKnown RBP7.3□□□□□ -1.24
GPHN-213ENST00000556501 PPLO60437 1756 aa7.3□□□□□ -1.24
GPHN-213ENST00000556501 MLH3Q9UHC1 1453 aa7.3□□□□□ -1.24
GPHN-213ENST00000556501 PER1O15534 1290 aaPredicted RBP7.29□□□□□ -1.24
GPHN-213ENST00000556501 IRX6P78412 446 aaPredicted RBP7.29□□□□□ -1.24
GPHN-213ENST00000556501 TMF1P82094 1093 aa7.29□□□□□ -1.24
GPHN-213ENST00000556501 SETBP1Q9Y6X0 1596 aa7.29□□□□□ -1.24
GPHN-213ENST00000556501 CAMSAP1Q5T5Y3 1602 aa7.28□□□□□ -1.24
GPHN-213ENST00000556501 EIF3AQ14152 1382 aaKnown RBP7.28□□□□□ -1.24
GPHN-213ENST00000556501 NEO1Q92859 1461 aa7.28□□□□□ -1.24
GPHN-213ENST00000556501 ABCC3O15438 1527 aa7.27□□□□□ -1.25
GPHN-213ENST00000556501 ASXL1Q8IXJ9 1541 aa7.27□□□□□ -1.25
GPHN-213ENST00000556501 PIK3C2BO00750 1634 aa7.27□□□□□ -1.25
GPHN-213ENST00000556501 DIP2CQ9Y2E4 1556 aa7.27□□□□□ -1.25
GPHN-213ENST00000556501 RICTORQ6R327 1708 aa7.27□□□□□ -1.25
GPHN-213ENST00000556501 KIF3BO15066 747 aa7.26□□□□□ -1.25
GPHN-213ENST00000556501 CNGB1Q14028 1251 aaPredicted RBP7.26□□□□□ -1.25
GPHN-213ENST00000556501 RBM19Q9Y4C8 960 aaKnown RBP7.26□□□□□ -1.25
GPHN-213ENST00000556501 CD109Q6YHK3 1445 aa7.26□□□□□ -1.25
GPHN-213ENST00000556501 ERVK-7P63135 1459 aa7.25□□□□□ -1.25
GPHN-213ENST00000556501 NPC1L1Q9UHC9 1359 aa7.25□□□□□ -1.25
GPHN-213ENST00000556501 SBNO2Q9Y2G9 1366 aa7.25□□□□□ -1.25
GPHN-213ENST00000556501 SIGLEC1Q9BZZ2 1709 aa7.25□□□□□ -1.25
GPHN-213ENST00000556501 PIK3C2GO75747 1445 aa7.25□□□□□ -1.25
GPHN-213ENST00000556501 QRICH2Q9H0J4 1663 aa7.25□□□□□ -1.25
GPHN-213ENST00000556501 USP32Q8NFA0 1604 aa7.24□□□□□ -1.25
GPHN-213ENST00000556501 HAP1P54257 671 aaPredicted RBP7.24□□□□□ -1.25
GPHN-213ENST00000556501 PDE3BQ13370 1112 aa7.24□□□□□ -1.25
GPHN-213ENST00000556501 CDCA8Q53HL2 280 aa7.24□□□□□ -1.25
GPHN-213ENST00000556501 OSCARQ8IYS5 282 aa7.24□□□□□ -1.25
GPHN-213ENST00000556501 PANK3Q9H999 370 aa7.24□□□□□ -1.25
GPHN-213ENST00000556501 NPATQ14207 1427 aa7.24□□□□□ -1.25
GPHN-213ENST00000556501 ADGRB1O14514 1584 aa7.24□□□□□ -1.25
GPHN-213ENST00000556501 RIMBP3CA6NJZ7 1639 aa7.23□□□□□ -1.25
GPHN-213ENST00000556501 RIMBP3BA6NNM3 1639 aa7.23□□□□□ -1.25
GPHN-213ENST00000556501 RIMBP3Q9UFD9 1639 aa7.23□□□□□ -1.25
GPHN-213ENST00000556501 GLI2P10070 1586 aa7.23□□□□□ -1.25
GPHN-213ENST00000556501 ARHGEF28Q8N1W1 1705 aaKnown RBP7.22□□□□□ -1.25
GPHN-213ENST00000556501 NOS1P29475 1434 aa7.22□□□□□ -1.25
GPHN-213ENST00000556501 NPM1P06748 294 aaKnown RBP eCLIP7.22□□□□□ -1.25
GPHN-213ENST00000556501 FANCIQ9NVI1 1328 aa7.22□□□□□ -1.25
GPHN-213ENST00000556501 NEXMIFQ5QGS0 1516 aa7.22□□□□□ -1.25
GPHN-213ENST00000556501 ARHGAP31Q2M1Z3 1444 aa7.21□□□□□ -1.25
GPHN-213ENST00000556501 CC2D1BQ5T0F9 858 aaKnown RBP7.21□□□□□ -1.26
GPHN-213ENST00000556501 MYT1LQ9UL68 1186 aa7.21□□□□□ -1.26
GPHN-213ENST00000556501 PREX1Q8TCU6 1659 aa7.21□□□□□ -1.26
GPHN-213ENST00000556501 ADGRF5Q8IZF2 1346 aa7.21□□□□□ -1.26
GPHN-213ENST00000556501 RRP1P56182 461 aaKnown RBP7.2□□□□□ -1.26
GPHN-213ENST00000556501 B4GALNT3Q6L9W6 998 aa7.2□□□□□ -1.26
GPHN-213ENST00000556501 ZNF219Q9P2Y4 722 aaPredicted RBP7.2□□□□□ -1.26
GPHN-213ENST00000556501 KNSTRNQ9Y448 316 aa7.2□□□□□ -1.26
GPHN-213ENST00000556501 U3KPZ7 1027 aaPredicted RBP7.2□□□□□ -1.26
GPHN-213ENST00000556501 CFAP65Q6ZU64 1925 aaKnown RBP7.19□□□□□ -1.26
GPHN-213ENST00000556501 SPDYE4A6NLX3 237 aa7.19□□□□□ -1.26
GPHN-213ENST00000556501 PPP2R1AP30153 589 aa7.19□□□□□ -1.26
GPHN-213ENST00000556501 CFAP70Q5T0N1 1121 aa7.19□□□□□ -1.26
GPHN-213ENST00000556501 ANP32EQ9BTT0 268 aa7.19□□□□□ -1.26
GPHN-213ENST00000556501 REREQ9P2R6 1566 aa7.19□□□□□ -1.26
GPHN-213ENST00000556501 RPGRIP1LQ68CZ1 1315 aa7.19□□□□□ -1.26
GPHN-213ENST00000556501 SHPRHQ149N8 1683 aa7.19□□□□□ -1.26
GPHN-213ENST00000556501 MYO5BQ9ULV0 1848 aa7.18□□□□□ -1.26
GPHN-213ENST00000556501 RCAN3Q9UKA8 241 aa7.18□□□□□ -1.26
GPHN-213ENST00000556501 TULP4Q9NRJ4 1543 aa7.17□□□□□ -1.26
GPHN-213ENST00000556501 DIP2BQ9P265 1576 aa7.17□□□□□ -1.26
GPHN-213ENST00000556501 TMEM131LA2VDJ0 1609 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms