RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 TNRQ92752 1358 aa15.22■□□□□ 0.03
LINC01550-206ENST00000556462 NEXMIFQ5QGS0 1516 aa15.22■□□□□ 0.03
LINC01550-206ENST00000556462 CFAP70Q5T0N1 1121 aa15.22■□□□□ 0.03
LINC01550-206ENST00000556462 PPLO60437 1756 aa15.22■□□□□ 0.03
LINC01550-206ENST00000556462 VGFO15240 615 aaPredicted RBP15.21■□□□□ 0.03
LINC01550-206ENST00000556462 WASHC2AQ641Q2 1341 aa15.21■□□□□ 0.03
LINC01550-206ENST00000556462 ST20-MTHFSA0A0A6YYL1 179 aa15.21■□□□□ 0.03
LINC01550-206ENST00000556462 DDX10Q13206 875 aaKnown RBP15.21■□□□□ 0.03
LINC01550-206ENST00000556462 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
LINC01550-206ENST00000556462 PIK3C2GO75747 1445 aa15.21■□□□□ 0.02
LINC01550-206ENST00000556462 NUTM2DQ5VT03 806 aaPredicted RBP15.2■□□□□ 0.02
LINC01550-206ENST00000556462 ZFYVE9O95405 1425 aa15.2■□□□□ 0.02
LINC01550-206ENST00000556462 A2ML1A8K2U0 1454 aa15.2■□□□□ 0.02
LINC01550-206ENST00000556462 LAMC1P11047 1609 aa15.2■□□□□ 0.02
LINC01550-206ENST00000556462 FER1L4A9Z1Z3 1794 aa15.2■□□□□ 0.02
LINC01550-206ENST00000556462 MYO5BQ9ULV0 1848 aa15.19■□□□□ 0.02
LINC01550-206ENST00000556462 C14orf93Q9H972 538 aaKnown RBP15.19■□□□□ 0.02
LINC01550-206ENST00000556462 KIAA1210Q9ULL0 1709 aa15.18■□□□□ 0.02
LINC01550-206ENST00000556462 C3P01024 1663 aa15.18■□□□□ 0.02
LINC01550-206ENST00000556462 CCDC7Q96M83 1385 aa15.16■□□□□ 0.02
LINC01550-206ENST00000556462 ADAMTSL3P82987 1691 aa15.15■□□□□ 0.02
LINC01550-206ENST00000556462 KIF7Q2M1P5 1343 aa15.15■□□□□ 0.02
LINC01550-206ENST00000556462 SCAF11Q99590 1463 aaKnown RBP15.14■□□□□ 0.01
LINC01550-206ENST00000556462 NLRP1Q9C000 1473 aa15.14■□□□□ 0.01
LINC01550-206ENST00000556462 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
LINC01550-206ENST00000556462 TESK2Q96S53 571 aa15.14■□□□□ 0.01
LINC01550-206ENST00000556462 MIER1Q8N108 512 aa15.13■□□□□ 0.01
LINC01550-206ENST00000556462 RIMS2Q9UQ26 1411 aa15.13■□□□□ 0.01
LINC01550-206ENST00000556462 SETBP1Q9Y6X0 1596 aa15.12■□□□□ 0.01
LINC01550-206ENST00000556462 IQGAP1P46940 1657 aa15.12■□□□□ 0.01
LINC01550-206ENST00000556462 ADGRB1O14514 1584 aa15.12■□□□□ 0.01
LINC01550-206ENST00000556462 TMEM132EQ6IEE7 984 aa15.12■□□□□ 0.01
LINC01550-206ENST00000556462 KDM5AP29375 1690 aaKnown RBP15.11■□□□□ 0.01
LINC01550-206ENST00000556462 RIMS1Q86UR5 1692 aaKnown RBP15.11■□□□□ 0.01
LINC01550-206ENST00000556462 UBR1Q8IWV7 1749 aa15.1■□□□□ 0.01
LINC01550-206ENST00000556462 TMEM2Q9UHN6 1383 aa15.1■□□□□ 0.01
LINC01550-206ENST00000556462 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.1■□□□□ 0.01
LINC01550-206ENST00000556462 SENP3Q9H4L4 574 aaPredicted RBP15.09■□□□□ 0.01
LINC01550-206ENST00000556462 POLR1AO95602 1720 aaPredicted RBP15.08■□□□□ 0.01
LINC01550-206ENST00000556462 HDGFP51858 240 aaKnown RBP15.08■□□□□ 0
LINC01550-206ENST00000556462 EIF3AQ14152 1382 aaKnown RBP15.07■□□□□ 0
LINC01550-206ENST00000556462 TRAK1Q9UPV9 953 aa15.07■□□□□ 0
LINC01550-206ENST00000556462 ALKQ9UM73 1620 aa15.06■□□□□ 0
LINC01550-206ENST00000556462 LTKP29376 864 aa15.05■□□□□ 0
LINC01550-206ENST00000556462 DISP3Q9P2K9 1392 aa15.05■□□□□ 0
LINC01550-206ENST00000556462 ASXL1Q8IXJ9 1541 aa15.05■□□□□ 0
LINC01550-206ENST00000556462 TMF1P82094 1093 aa15.05■□□□□ -0
LINC01550-206ENST00000556462 THEMISQ8N1K5 641 aaPredicted RBP15.05■□□□□ -0
LINC01550-206ENST00000556462 POLR3GLQ9BT43 218 aa15.04■□□□□ -0
LINC01550-206ENST00000556462 MYO3AQ8NEV4 1616 aa15.04■□□□□ -0
LINC01550-206ENST00000556462 PTPRMP28827 1452 aa15.03■□□□□ -0
LINC01550-206ENST00000556462 ARHGAP23Q9P227 1491 aa15.03■□□□□ -0
LINC01550-206ENST00000556462 SLIT1O75093 1534 aa15.03■□□□□ -0
LINC01550-206ENST00000556462 TXNDC2Q86VQ3 553 aa15.02■□□□□ -0
LINC01550-206ENST00000556462 CENPJQ9HC77 1338 aaPredicted RBP15.02□□□□□ -0.01
LINC01550-206ENST00000556462 SBNO2Q9Y2G9 1366 aa15.01□□□□□ -0.01
LINC01550-206ENST00000556462 NRXN3Q9Y4C0 1643 aa15.01□□□□□ -0.01
LINC01550-206ENST00000556462 SLC24A1O60721 1099 aa15.01□□□□□ -0.01
LINC01550-206ENST00000556462 SETD1BQ9UPS6 1966 aaKnown RBP15.01□□□□□ -0.01
LINC01550-206ENST00000556462 STK26Q9P289 416 aa15.01□□□□□ -0.01
LINC01550-206ENST00000556462 EID1Q9Y6B2 187 aa15.01□□□□□ -0.01
LINC01550-206ENST00000556462 YTHDC2Q9H6S0 1430 aaKnown RBP15□□□□□ -0.01
LINC01550-206ENST00000556462 CEP170BQ9Y4F5 1589 aaPredicted RBP15□□□□□ -0.01
LINC01550-206ENST00000556462 PLEKHG1Q9ULL1 1385 aa15□□□□□ -0.01
LINC01550-206ENST00000556462 SETD1AO15047 1707 aaKnown RBP14.99□□□□□ -0.01
LINC01550-206ENST00000556462 METP08581 1390 aa14.99□□□□□ -0.01
LINC01550-206ENST00000556462 ADAMTS13Q76LX8 1427 aa14.98□□□□□ -0.01
LINC01550-206ENST00000556462 ANP32CO43423 234 aa14.98□□□□□ -0.01
LINC01550-206ENST00000556462 CDCA8Q53HL2 280 aa14.97□□□□□ -0.01
LINC01550-206ENST00000556462 BCANQ96GW7 911 aa14.97□□□□□ -0.01
LINC01550-206ENST00000556462 LRPPRCP42704 1394 aaKnown RBP14.97□□□□□ -0.01
LINC01550-206ENST00000556462 ARHGEF28Q8N1W1 1705 aaKnown RBP14.96□□□□□ -0.01
LINC01550-206ENST00000556462 ABCC11Q96J66 1382 aa14.96□□□□□ -0.01
LINC01550-206ENST00000556462 MED14O60244 1454 aa14.96□□□□□ -0.02
LINC01550-206ENST00000556462 PRAM1Q96QH2 718 aa14.95□□□□□ -0.02
LINC01550-206ENST00000556462 ZNF142P52746 1687 aaPredicted RBP14.95□□□□□ -0.02
LINC01550-206ENST00000556462 KDM4FA0A1W2PPD8 638 aa14.94□□□□□ -0.02
LINC01550-206ENST00000556462 SLC26A8Q96RN1 970 aa14.94□□□□□ -0.02
LINC01550-206ENST00000556462 QRICH2Q9H0J4 1663 aa14.93□□□□□ -0.02
LINC01550-206ENST00000556462 PER1O15534 1290 aaPredicted RBP14.93□□□□□ -0.02
LINC01550-206ENST00000556462 SAFB2Q14151 953 aaKnown RBP eCLIP14.93□□□□□ -0.02
LINC01550-206ENST00000556462 TBX22Q9Y458 520 aa14.93□□□□□ -0.02
LINC01550-206ENST00000556462 DLC1Q96QB1 1528 aa14.92□□□□□ -0.02
LINC01550-206ENST00000556462 ANKLE2Q86XL3 938 aa14.92□□□□□ -0.02
LINC01550-206ENST00000556462 PRKRIP1Q9H875 184 aaPredicted RBP14.92□□□□□ -0.02
LINC01550-206ENST00000556462 POGKQ9P215 609 aa14.92□□□□□ -0.02
LINC01550-206ENST00000556462 WAPLQ7Z5K2 1190 aa14.91□□□□□ -0.02
LINC01550-206ENST00000556462 PANK3Q9H999 370 aa14.91□□□□□ -0.02
LINC01550-206ENST00000556462 SIRT1Q96EB6 747 aa14.91□□□□□ -0.02
LINC01550-206ENST00000556462 TECPR2O15040 1411 aa14.9□□□□□ -0.02
LINC01550-206ENST00000556462 PUS7Q96PZ0 661 aaKnown RBP14.9□□□□□ -0.02
LINC01550-206ENST00000556462 EVC2Q86UK5 1308 aa14.89□□□□□ -0.03
LINC01550-206ENST00000556462 PLEKHH1Q9ULM0 1364 aa14.89□□□□□ -0.03
LINC01550-206ENST00000556462 CCER2I3L3R5 266 aa14.89□□□□□ -0.03
LINC01550-206ENST00000556462 TULP4Q9NRJ4 1543 aa14.89□□□□□ -0.03
LINC01550-206ENST00000556462 PTPRUQ92729 1446 aa14.88□□□□□ -0.03
LINC01550-206ENST00000556462 MINK1Q8N4C8 1332 aaPredicted RBP14.88□□□□□ -0.03
LINC01550-206ENST00000556462 FAM135BQ49AJ0 1406 aa14.88□□□□□ -0.03
LINC01550-206ENST00000556462 ROBO2Q9HCK4 1378 aa14.87□□□□□ -0.03
LINC01550-206ENST00000556462 MYOM1P52179 1685 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms