RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 GCC2Q8IWJ2 1684 aa19.32■□□□□ 0.68
APEX1-213ENST00000556296 FAM135BQ49AJ0 1406 aa19.32■□□□□ 0.68
APEX1-213ENST00000556296 ALKQ9UM73 1620 aa19.32■□□□□ 0.68
APEX1-213ENST00000556296 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.31■□□□□ 0.68
APEX1-213ENST00000556296 ADGRB3O60242 1522 aa19.3■□□□□ 0.68
APEX1-213ENST00000556296 CHGAP10645 457 aaKnown RBP19.28■□□□□ 0.68
APEX1-213ENST00000556296 MSH6P52701 1360 aa19.27■□□□□ 0.68
APEX1-213ENST00000556296 XIRP1Q702N8 1843 aaKnown RBP19.27■□□□□ 0.68
APEX1-213ENST00000556296 MYO5BQ9ULV0 1848 aa19.27■□□□□ 0.68
APEX1-213ENST00000556296 RRBP1Q9P2E9 1410 aaKnown RBP19.26■□□□□ 0.67
APEX1-213ENST00000556296 IQGAP3Q86VI3 1631 aa19.26■□□□□ 0.67
APEX1-213ENST00000556296 E9PCH4 1651 aa19.26■□□□□ 0.67
APEX1-213ENST00000556296 PLEKHG1Q9ULL1 1385 aa19.25■□□□□ 0.67
APEX1-213ENST00000556296 NKTRP30414 1462 aaKnown RBP19.24■□□□□ 0.67
APEX1-213ENST00000556296 TBX22Q9Y458 520 aa19.24■□□□□ 0.67
APEX1-213ENST00000556296 TMEM131LA2VDJ0 1609 aa19.22■□□□□ 0.67
APEX1-213ENST00000556296 C14orf37Q86TY3 774 aa19.22■□□□□ 0.67
APEX1-213ENST00000556296 RBM33Q96EV2 1170 aaKnown RBP19.22■□□□□ 0.67
APEX1-213ENST00000556296 SLAIN2Q9P270 581 aa19.22■□□□□ 0.67
APEX1-213ENST00000556296 RIMS2Q9UQ26 1411 aa19.22■□□□□ 0.67
APEX1-213ENST00000556296 ZFYVE9O95405 1425 aa19.21■□□□□ 0.67
APEX1-213ENST00000556296 NCOA3Q9Y6Q9 1424 aa19.18■□□□□ 0.66
APEX1-213ENST00000556296 NUP155O75694 1391 aa19.18■□□□□ 0.66
APEX1-213ENST00000556296 ITGAEP38570 1179 aa19.17■□□□□ 0.66
APEX1-213ENST00000556296 NWD1Q149M9 1564 aa19.17■□□□□ 0.66
APEX1-213ENST00000556296 CADPS2Q86UW7 1296 aa19.16■□□□□ 0.66
APEX1-213ENST00000556296 ATF3P18847 181 aa19.15■□□□□ 0.66
APEX1-213ENST00000556296 PIK3R4Q99570 1358 aa19.15■□□□□ 0.66
APEX1-213ENST00000556296 C19orf44Q9H6X5 657 aa19.14■□□□□ 0.65
APEX1-213ENST00000556296 RGS17Q9UGC6 210 aaPredicted RBP19.14■□□□□ 0.65
APEX1-213ENST00000556296 CHD2O14647 1828 aaKnown RBP19.14■□□□□ 0.65
APEX1-213ENST00000556296 JCADQ9P266 1359 aa19.13■□□□□ 0.65
APEX1-213ENST00000556296 NUTM2DQ5VT03 806 aaPredicted RBP19.12■□□□□ 0.65
APEX1-213ENST00000556296 SPHKAPQ2M3C7 1700 aa19.11■□□□□ 0.65
APEX1-213ENST00000556296 ZNF326Q5BKZ1 582 aaKnown RBP19.09■□□□□ 0.65
APEX1-213ENST00000556296 AMOTL2Q9Y2J4 779 aa19.09■□□□□ 0.65
APEX1-213ENST00000556296 ROBO1Q9Y6N7 1651 aa19.08■□□□□ 0.65
APEX1-213ENST00000556296 NAIPQ13075 1403 aa19.08■□□□□ 0.64
APEX1-213ENST00000556296 MEX3CQ5U5Q3 659 aaKnown RBP19.07■□□□□ 0.64
APEX1-213ENST00000556296 ADAMTS13Q76LX8 1427 aa19.07■□□□□ 0.64
APEX1-213ENST00000556296 DIP2AQ14689 1571 aa19.06■□□□□ 0.64
APEX1-213ENST00000556296 SPATA31A6Q5VVP1 1343 aa19.06■□□□□ 0.64
APEX1-213ENST00000556296 POTEAQ6S8J7 498 aa19.06■□□□□ 0.64
APEX1-213ENST00000556296 TRIM26Q12899 539 aaPredicted RBP19.03■□□□□ 0.64
APEX1-213ENST00000556296 ZNF772Q68DY9 489 aaPredicted RBP19.03■□□□□ 0.64
APEX1-213ENST00000556296 TRPM2O94759 1503 aa19.02■□□□□ 0.64
APEX1-213ENST00000556296 HFM1A2PYH4 1435 aa19■□□□□ 0.63
APEX1-213ENST00000556296 NRXN3Q9Y4C0 1643 aa19■□□□□ 0.63
APEX1-213ENST00000556296 CLTCL1P53675 1640 aa19■□□□□ 0.63
APEX1-213ENST00000556296 DCCP43146 1447 aa18.98■□□□□ 0.63
APEX1-213ENST00000556296 SETBP1Q9Y6X0 1596 aa18.98■□□□□ 0.63
APEX1-213ENST00000556296 PHLPP1O60346 1717 aa18.97■□□□□ 0.63
APEX1-213ENST00000556296 BRINP3Q76B58 766 aa18.97■□□□□ 0.63
APEX1-213ENST00000556296 KIF1BO60333 1816 aa18.97■□□□□ 0.63
APEX1-213ENST00000556296 PTPRUQ92729 1446 aa18.96■□□□□ 0.63
APEX1-213ENST00000556296 VGFO15240 615 aaPredicted RBP18.95■□□□□ 0.62
APEX1-213ENST00000556296 NEXMIFQ5QGS0 1516 aa18.95■□□□□ 0.62
APEX1-213ENST00000556296 TRIM52Q96A61 297 aa18.94■□□□□ 0.62
APEX1-213ENST00000556296 LRRC59Q96AG4 307 aaKnown RBP18.94■□□□□ 0.62
APEX1-213ENST00000556296 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
APEX1-213ENST00000556296 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.94■□□□□ 0.62
APEX1-213ENST00000556296 NUTM2BA6NNL0 878 aaPredicted RBP18.91■□□□□ 0.62
APEX1-213ENST00000556296 NUTM2EB1AL46 878 aaPredicted RBP18.91■□□□□ 0.62
APEX1-213ENST00000556296 NUTM2AQ8IVF1 878 aaPredicted RBP18.91■□□□□ 0.62
APEX1-213ENST00000556296 AHDC1Q5TGY3 1603 aaPredicted RBP18.91■□□□□ 0.62
APEX1-213ENST00000556296 METP08581 1390 aa18.91■□□□□ 0.62
APEX1-213ENST00000556296 COL16A1Q07092 1604 aaPredicted RBP18.9■□□□□ 0.62
APEX1-213ENST00000556296 RXRBP28702 533 aa18.9■□□□□ 0.62
APEX1-213ENST00000556296 RPGRIP1LQ68CZ1 1315 aa18.9■□□□□ 0.62
APEX1-213ENST00000556296 SLC4A1APQ9BWU0 796 aaKnown RBP18.88■□□□□ 0.61
APEX1-213ENST00000556296 MST1RQ04912 1400 aa18.86■□□□□ 0.61
APEX1-213ENST00000556296 SETD5Q9C0A6 1442 aa18.86■□□□□ 0.61
APEX1-213ENST00000556296 ADGRL3Q9HAR2 1447 aa18.86■□□□□ 0.61
APEX1-213ENST00000556296 SETD1AO15047 1707 aaKnown RBP18.86■□□□□ 0.61
APEX1-213ENST00000556296 ASXL1Q8IXJ9 1541 aa18.85■□□□□ 0.61
APEX1-213ENST00000556296 LRP6O75581 1613 aa18.85■□□□□ 0.61
APEX1-213ENST00000556296 PPLO60437 1756 aa18.84■□□□□ 0.61
APEX1-213ENST00000556296 AFF2P51816 1311 aa18.82■□□□□ 0.6
APEX1-213ENST00000556296 C8orf37Q96NL8 207 aa18.81■□□□□ 0.6
APEX1-213ENST00000556296 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
APEX1-213ENST00000556296 SHPRHQ149N8 1683 aa18.8■□□□□ 0.6
APEX1-213ENST00000556296 PTCH1Q13635 1447 aa18.8■□□□□ 0.6
APEX1-213ENST00000556296 NALCNQ8IZF0 1738 aa18.79■□□□□ 0.6
APEX1-213ENST00000556296 ACIN1Q9UKV3 1341 aaKnown RBP18.78■□□□□ 0.6
APEX1-213ENST00000556296 PRAG1Q86YV5 1406 aa18.78■□□□□ 0.6
APEX1-213ENST00000556296 UPF1Q92900 1129 aaKnown RBP eCLIP18.78■□□□□ 0.6
APEX1-213ENST00000556296 NGLY1Q96IV0 654 aa18.78■□□□□ 0.6
APEX1-213ENST00000556296 C1orf167Q5SNV9 1468 aa18.77■□□□□ 0.6
APEX1-213ENST00000556296 RBM6P78332 1123 aaKnown RBP18.77■□□□□ 0.6
APEX1-213ENST00000556296 FOXD1Q16676 465 aa18.77■□□□□ 0.6
APEX1-213ENST00000556296 QTRT2Q9H974 415 aaKnown RBP18.77■□□□□ 0.6
APEX1-213ENST00000556296 PNPLA6Q8IY17 1366 aa18.77■□□□□ 0.6
APEX1-213ENST00000556296 CDK12Q9NYV4 1490 aaPredicted RBP18.77■□□□□ 0.59
APEX1-213ENST00000556296 DDX17Q92841 729 aaKnown RBP18.76■□□□□ 0.59
APEX1-213ENST00000556296 RAB3GAP2Q9H2M9 1393 aa18.76■□□□□ 0.59
APEX1-213ENST00000556296 IFT172Q9UG01 1749 aa18.75■□□□□ 0.59
APEX1-213ENST00000556296 MPHOSPH9Q99550 1183 aa18.75■□□□□ 0.59
APEX1-213ENST00000556296 ROBO2Q9HCK4 1378 aa18.75■□□□□ 0.59
APEX1-213ENST00000556296 SPATA31E1Q6ZUB1 1445 aa18.74■□□□□ 0.59
APEX1-213ENST00000556296 NHSL1Q5SYE7 1610 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms