RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 PPP1R15AO75807 674 aaPredicted RBP11.05□□□□□ -0.64
TDP1-214ENST00000556063 RGL3Q3MIN7 710 aa11.05□□□□□ -0.64
TDP1-214ENST00000556063 TXNDC2Q86VQ3 553 aa11.05□□□□□ -0.64
TDP1-214ENST00000556063 NEURL4Q96JN8 1562 aa11.04□□□□□ -0.64
TDP1-214ENST00000556063 VGFO15240 615 aaPredicted RBP11.04□□□□□ -0.64
TDP1-214ENST00000556063 NEUROD1Q13562 356 aa11.04□□□□□ -0.64
TDP1-214ENST00000556063 STAC3Q96MF2 364 aa11.04□□□□□ -0.64
TDP1-214ENST00000556063 DMRT2Q9Y5R5 561 aa11.04□□□□□ -0.64
TDP1-214ENST00000556063 MYO5BQ9ULV0 1848 aa11.04□□□□□ -0.64
TDP1-214ENST00000556063 SLIT1O75093 1534 aa11.04□□□□□ -0.64
TDP1-214ENST00000556063 SPATA31E1Q6ZUB1 1445 aa11.03□□□□□ -0.64
TDP1-214ENST00000556063 RIMS2Q9UQ26 1411 aa11.03□□□□□ -0.64
TDP1-214ENST00000556063 SIN3AQ96ST3 1273 aa11.03□□□□□ -0.64
TDP1-214ENST00000556063 ARHGAP23Q9P227 1491 aa11.03□□□□□ -0.64
TDP1-214ENST00000556063 SCAF11Q99590 1463 aaKnown RBP11.02□□□□□ -0.65
TDP1-214ENST00000556063 BCANQ96GW7 911 aa11.02□□□□□ -0.65
TDP1-214ENST00000556063 TONSLQ96HA7 1378 aa11.01□□□□□ -0.65
TDP1-214ENST00000556063 LTKP29376 864 aa11□□□□□ -0.65
TDP1-214ENST00000556063 TIMELESSQ9UNS1 1208 aa11□□□□□ -0.65
TDP1-214ENST00000556063 NCKAP5LQ9HCH0 1330 aa11□□□□□ -0.65
TDP1-214ENST00000556063 ZFYVE9O95405 1425 aa11□□□□□ -0.65
TDP1-214ENST00000556063 POLR1AO95602 1720 aaPredicted RBP10.99□□□□□ -0.65
TDP1-214ENST00000556063 DCAF11Q8TEB1 546 aa10.99□□□□□ -0.65
TDP1-214ENST00000556063 NUTM2DQ5VT03 806 aaPredicted RBP10.98□□□□□ -0.65
TDP1-214ENST00000556063 KDM2AQ9Y2K7 1162 aa10.98□□□□□ -0.65
TDP1-214ENST00000556063 PLEKHG1Q9ULL1 1385 aa10.98□□□□□ -0.65
TDP1-214ENST00000556063 NPHP4O75161 1426 aaPredicted RBP10.98□□□□□ -0.65
TDP1-214ENST00000556063 MED14O60244 1454 aa10.98□□□□□ -0.65
TDP1-214ENST00000556063 NEXMIFQ5QGS0 1516 aa10.98□□□□□ -0.65
TDP1-214ENST00000556063 PPLO60437 1756 aa10.98□□□□□ -0.65
TDP1-214ENST00000556063 L3MBTL2Q969R5 705 aa10.97□□□□□ -0.65
TDP1-214ENST00000556063 MYOM2P54296 1465 aa10.96□□□□□ -0.65
TDP1-214ENST00000556063 STRCQ7RTU9 1775 aa10.95□□□□□ -0.66
TDP1-214ENST00000556063 IFT172Q9UG01 1749 aa10.95□□□□□ -0.66
TDP1-214ENST00000556063 IQGAP1P46940 1657 aa10.95□□□□□ -0.66
TDP1-214ENST00000556063 ADGRF5Q8IZF2 1346 aa10.94□□□□□ -0.66
TDP1-214ENST00000556063 TBX22Q9Y458 520 aa10.94□□□□□ -0.66
TDP1-214ENST00000556063 SLC26A8Q96RN1 970 aa10.93□□□□□ -0.66
TDP1-214ENST00000556063 DIP2AQ14689 1571 aa10.92□□□□□ -0.66
TDP1-214ENST00000556063 SETBP1Q9Y6X0 1596 aa10.92□□□□□ -0.66
TDP1-214ENST00000556063 PIK3C2GO75747 1445 aa10.92□□□□□ -0.66
TDP1-214ENST00000556063 PIK3R4Q99570 1358 aa10.91□□□□□ -0.66
TDP1-214ENST00000556063 C14orf93Q9H972 538 aaKnown RBP10.91□□□□□ -0.66
TDP1-214ENST00000556063 NRXN1Q9ULB1 1477 aa10.91□□□□□ -0.66
TDP1-214ENST00000556063 ADAMTS13Q76LX8 1427 aa10.91□□□□□ -0.66
TDP1-214ENST00000556063 LAMC1P11047 1609 aa10.9□□□□□ -0.66
TDP1-214ENST00000556063 PRAG1Q86YV5 1406 aa10.9□□□□□ -0.66
TDP1-214ENST00000556063 CFAP70Q5T0N1 1121 aa10.89□□□□□ -0.67
TDP1-214ENST00000556063 ALKQ9UM73 1620 aa10.88□□□□□ -0.67
TDP1-214ENST00000556063 KCNA6P17658 529 aa10.88□□□□□ -0.67
TDP1-214ENST00000556063 NRXN3Q9Y4C0 1643 aa10.87□□□□□ -0.67
TDP1-214ENST00000556063 KIAA1210Q9ULL0 1709 aa10.87□□□□□ -0.67
TDP1-214ENST00000556063 ZEB1P37275 1124 aaPredicted RBP10.86□□□□□ -0.67
TDP1-214ENST00000556063 AMOTL2Q9Y2J4 779 aa10.86□□□□□ -0.67
TDP1-214ENST00000556063 METP08581 1390 aa10.86□□□□□ -0.67
TDP1-214ENST00000556063 CACNB1Q02641 598 aaPredicted RBP10.85□□□□□ -0.67
TDP1-214ENST00000556063 TMEM132EQ6IEE7 984 aa10.85□□□□□ -0.67
TDP1-214ENST00000556063 ZNF335Q9H4Z2 1342 aaPredicted RBP10.84□□□□□ -0.67
TDP1-214ENST00000556063 CHD2O14647 1828 aaKnown RBP10.84□□□□□ -0.67
TDP1-214ENST00000556063 NBPF8Q3BBV2 869 aa10.84□□□□□ -0.67
TDP1-214ENST00000556063 STK26Q9P289 416 aa10.84□□□□□ -0.67
TDP1-214ENST00000556063 ROCK2O75116 1388 aaKnown RBP10.84□□□□□ -0.67
TDP1-214ENST00000556063 LRPPRCP42704 1394 aaKnown RBP10.84□□□□□ -0.67
TDP1-214ENST00000556063 CPS1P31327 1500 aa10.84□□□□□ -0.67
TDP1-214ENST00000556063 NKTRP30414 1462 aaKnown RBP10.83□□□□□ -0.68
TDP1-214ENST00000556063 ABCC11Q96J66 1382 aa10.83□□□□□ -0.68
TDP1-214ENST00000556063 PROSER2Q86WR7 435 aaPredicted RBP10.83□□□□□ -0.68
TDP1-214ENST00000556063 SETD1AO15047 1707 aaKnown RBP10.83□□□□□ -0.68
TDP1-214ENST00000556063 YTHDC2Q9H6S0 1430 aaKnown RBP10.83□□□□□ -0.68
TDP1-214ENST00000556063 NBPF1Q3BBV0 1214 aa10.82□□□□□ -0.68
TDP1-214ENST00000556063 SIRT1Q96EB6 747 aa10.82□□□□□ -0.68
TDP1-214ENST00000556063 CARD11Q9BXL7 1154 aa10.82□□□□□ -0.68
TDP1-214ENST00000556063 TRPM1Q7Z4N2 1603 aa10.82□□□□□ -0.68
TDP1-214ENST00000556063 NWD1Q149M9 1564 aa10.82□□□□□ -0.68
TDP1-214ENST00000556063 RALGAPBQ86X10 1494 aa10.81□□□□□ -0.68
TDP1-214ENST00000556063 C14orf37Q86TY3 774 aa10.81□□□□□ -0.68
TDP1-214ENST00000556063 POGKQ9P215 609 aa10.81□□□□□ -0.68
TDP1-214ENST00000556063 PTPRUQ92729 1446 aa10.81□□□□□ -0.68
TDP1-214ENST00000556063 ADGRB1O14514 1584 aa10.81□□□□□ -0.68
TDP1-214ENST00000556063 EIF3AQ14152 1382 aaKnown RBP10.8□□□□□ -0.68
TDP1-214ENST00000556063 GPRASP1Q5JY77 1395 aa10.8□□□□□ -0.68
TDP1-214ENST00000556063 TRAK1Q9UPV9 953 aa10.8□□□□□ -0.68
TDP1-214ENST00000556063 TECPR2O15040 1411 aa10.8□□□□□ -0.68
TDP1-214ENST00000556063 PTCH1Q13635 1447 aa10.8□□□□□ -0.68
TDP1-214ENST00000556063 XRN1Q8IZH2 1706 aaKnown RBP10.8□□□□□ -0.68
TDP1-214ENST00000556063 ASXL1Q8IXJ9 1541 aa10.79□□□□□ -0.68
TDP1-214ENST00000556063 KNDC1Q76NI1 1749 aa10.79□□□□□ -0.68
TDP1-214ENST00000556063 FAM135BQ49AJ0 1406 aa10.79□□□□□ -0.68
TDP1-214ENST00000556063 NCOA3Q9Y6Q9 1424 aa10.79□□□□□ -0.68
TDP1-214ENST00000556063 DLC1Q96QB1 1528 aa10.79□□□□□ -0.68
TDP1-214ENST00000556063 LTBP4Q8N2S1 1624 aa10.78□□□□□ -0.68
TDP1-214ENST00000556063 TMEM94Q12767 1356 aa10.77□□□□□ -0.68
TDP1-214ENST00000556063 ROBO2Q9HCK4 1378 aa10.77□□□□□ -0.68
TDP1-214ENST00000556063 STRCP1A6NGW2 1772 aa10.77□□□□□ -0.68
TDP1-214ENST00000556063 SLC24A1O60721 1099 aa10.77□□□□□ -0.69
TDP1-214ENST00000556063 PRAM1Q96QH2 718 aa10.77□□□□□ -0.69
TDP1-214ENST00000556063 LRRC7Q96NW7 1537 aa10.77□□□□□ -0.69
TDP1-214ENST00000556063 WAPLQ7Z5K2 1190 aa10.76□□□□□ -0.69
TDP1-214ENST00000556063 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
TDP1-214ENST00000556063 C19orf44Q9H6X5 657 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms