RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 SLC24A1O60721 1099 aa13.81□□□□□ -0.2
EFCAB11-209ENST00000556005 KTN1Q86UP2 1357 aaKnown RBP13.8□□□□□ -0.2
EFCAB11-209ENST00000556005 CCDC184Q52MB2 194 aa13.8□□□□□ -0.2
EFCAB11-209ENST00000556005 CDCA8Q53HL2 280 aa13.8□□□□□ -0.2
EFCAB11-209ENST00000556005 CFAP70Q5T0N1 1121 aa13.8□□□□□ -0.2
EFCAB11-209ENST00000556005 SLC52A1Q9NWF4 448 aa13.8□□□□□ -0.2
EFCAB11-209ENST00000556005 DISP3Q9P2K9 1392 aa13.8□□□□□ -0.2
EFCAB11-209ENST00000556005 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
EFCAB11-209ENST00000556005 CFAP65Q6ZU64 1925 aaKnown RBP13.79□□□□□ -0.2
EFCAB11-209ENST00000556005 REREQ9P2R6 1566 aa13.79□□□□□ -0.2
EFCAB11-209ENST00000556005 MROH2AA6NES4 1674 aa13.78□□□□□ -0.2
EFCAB11-209ENST00000556005 IQGAP1P46940 1657 aa13.78□□□□□ -0.2
EFCAB11-209ENST00000556005 IFT172Q9UG01 1749 aa13.78□□□□□ -0.2
EFCAB11-209ENST00000556005 HNRNPUQ00839 825 aaKnown RBP eCLIP13.78□□□□□ -0.2
EFCAB11-209ENST00000556005 RALBP1Q15311 655 aa13.78□□□□□ -0.2
EFCAB11-209ENST00000556005 AGLP35573 1532 aa13.78□□□□□ -0.2
EFCAB11-209ENST00000556005 KIF13AQ9H1H9 1805 aa13.77□□□□□ -0.21
EFCAB11-209ENST00000556005 FAM9BQ8IZU0 186 aa13.76□□□□□ -0.21
EFCAB11-209ENST00000556005 PIK3C2BO00750 1634 aa13.76□□□□□ -0.21
EFCAB11-209ENST00000556005 VGFO15240 615 aaPredicted RBP13.76□□□□□ -0.21
EFCAB11-209ENST00000556005 IDI1Q13907 227 aa13.76□□□□□ -0.21
EFCAB11-209ENST00000556005 CNGB1Q14028 1251 aaPredicted RBP13.76□□□□□ -0.21
EFCAB11-209ENST00000556005 SIGLEC1Q9BZZ2 1709 aa13.76□□□□□ -0.21
EFCAB11-209ENST00000556005 DNAJC5Q9H3Z4 198 aa13.76□□□□□ -0.21
EFCAB11-209ENST00000556005 SYNMO15061 1565 aa13.75□□□□□ -0.21
EFCAB11-209ENST00000556005 PER1O15534 1290 aaPredicted RBP13.75□□□□□ -0.21
EFCAB11-209ENST00000556005 C14orf93Q9H972 538 aaKnown RBP13.75□□□□□ -0.21
EFCAB11-209ENST00000556005 PIK3C2GO75747 1445 aa13.74□□□□□ -0.21
EFCAB11-209ENST00000556005 PANK3Q9H999 370 aa13.74□□□□□ -0.21
EFCAB11-209ENST00000556005 PPLO60437 1756 aa13.74□□□□□ -0.21
EFCAB11-209ENST00000556005 MYBBP1AQ9BQG0 1328 aaKnown RBP13.73□□□□□ -0.21
EFCAB11-209ENST00000556005 SETBP1Q9Y6X0 1596 aa13.72□□□□□ -0.21
EFCAB11-209ENST00000556005 TMC1Q8TDI8 760 aa13.72□□□□□ -0.21
EFCAB11-209ENST00000556005 PREX1Q8TCU6 1659 aa13.71□□□□□ -0.22
EFCAB11-209ENST00000556005 BRD4O60885 1362 aaPredicted RBP13.7□□□□□ -0.22
EFCAB11-209ENST00000556005 PARD3Q8TEW0 1356 aa13.7□□□□□ -0.22
EFCAB11-209ENST00000556005 FBXO31Q5XUX0 539 aaPredicted RBP13.7□□□□□ -0.22
EFCAB11-209ENST00000556005 ARHGEF40Q8TER5 1519 aa13.69□□□□□ -0.22
EFCAB11-209ENST00000556005 ZFYVE9O95405 1425 aa13.69□□□□□ -0.22
EFCAB11-209ENST00000556005 SBNO2Q9Y2G9 1366 aa13.69□□□□□ -0.22
EFCAB11-209ENST00000556005 NEXMIFQ5QGS0 1516 aa13.68□□□□□ -0.22
EFCAB11-209ENST00000556005 MLECQ14165 292 aa13.68□□□□□ -0.22
EFCAB11-209ENST00000556005 ESF1Q9H501 851 aaKnown RBP13.68□□□□□ -0.22
EFCAB11-209ENST00000556005 ERVK-7P63135 1459 aa13.68□□□□□ -0.22
EFCAB11-209ENST00000556005 CENPJQ9HC77 1338 aaPredicted RBP13.68□□□□□ -0.22
EFCAB11-209ENST00000556005 NLRP13Q86W25 1043 aa13.67□□□□□ -0.22
EFCAB11-209ENST00000556005 PNISRQ8TF01 805 aaKnown RBP13.67□□□□□ -0.22
EFCAB11-209ENST00000556005 TRAK1Q9UPV9 953 aa13.67□□□□□ -0.22
EFCAB11-209ENST00000556005 KNSTRNQ9Y448 316 aa13.67□□□□□ -0.22
EFCAB11-209ENST00000556005 ZBED9Q6R2W3 1325 aa13.67□□□□□ -0.22
EFCAB11-209ENST00000556005 NUTM2DQ5VT03 806 aaPredicted RBP13.67□□□□□ -0.22
EFCAB11-209ENST00000556005 STAG3Q9UJ98 1225 aa13.67□□□□□ -0.22
EFCAB11-209ENST00000556005 ADGRB1O14514 1584 aa13.66□□□□□ -0.22
EFCAB11-209ENST00000556005 CC2D1BQ5T0F9 858 aaKnown RBP13.66□□□□□ -0.22
EFCAB11-209ENST00000556005 TMEM132EQ6IEE7 984 aa13.66□□□□□ -0.22
EFCAB11-209ENST00000556005 TMEM131LA2VDJ0 1609 aa13.65□□□□□ -0.22
EFCAB11-209ENST00000556005 MYO3AQ8NEV4 1616 aa13.65□□□□□ -0.22
EFCAB11-209ENST00000556005 CLTCQ00610 1675 aaKnown RBP13.65□□□□□ -0.22
EFCAB11-209ENST00000556005 PLPPR3Q6T4P5 718 aa13.65□□□□□ -0.22
EFCAB11-209ENST00000556005 SUPT16HQ9Y5B9 1047 aaKnown RBP13.65□□□□□ -0.22
EFCAB11-209ENST00000556005 KDM5AP29375 1690 aaKnown RBP13.64□□□□□ -0.23
EFCAB11-209ENST00000556005 SPATA31D1Q6ZQQ2 1576 aa13.62□□□□□ -0.23
EFCAB11-209ENST00000556005 NEFLP07196 543 aa13.62□□□□□ -0.23
EFCAB11-209ENST00000556005 ZMYM3Q14202 1370 aa13.62□□□□□ -0.23
EFCAB11-209ENST00000556005 LRPPRCP42704 1394 aaKnown RBP13.61□□□□□ -0.23
EFCAB11-209ENST00000556005 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
EFCAB11-209ENST00000556005 NPC1L1Q9UHC9 1359 aa13.6□□□□□ -0.23
EFCAB11-209ENST00000556005 PUS7Q96PZ0 661 aaKnown RBP13.59□□□□□ -0.23
EFCAB11-209ENST00000556005 MYO5BQ9ULV0 1848 aa13.59□□□□□ -0.23
EFCAB11-209ENST00000556005 ASXL1Q8IXJ9 1541 aa13.59□□□□□ -0.23
EFCAB11-209ENST00000556005 FKBP8Q14318 412 aa13.59□□□□□ -0.23
EFCAB11-209ENST00000556005 MYOM1P52179 1685 aa13.58□□□□□ -0.24
EFCAB11-209ENST00000556005 A2ML1A8K2U0 1454 aa13.58□□□□□ -0.24
EFCAB11-209ENST00000556005 EVC2Q86UK5 1308 aa13.58□□□□□ -0.24
EFCAB11-209ENST00000556005 QRICH2Q9H0J4 1663 aa13.57□□□□□ -0.24
EFCAB11-209ENST00000556005 HDGFP51858 240 aaKnown RBP13.56□□□□□ -0.24
EFCAB11-209ENST00000556005 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.56□□□□□ -0.24
EFCAB11-209ENST00000556005 TRHP20396 242 aaPredicted RBP13.55□□□□□ -0.24
EFCAB11-209ENST00000556005 PPP2R1AP30153 589 aa13.55□□□□□ -0.24
EFCAB11-209ENST00000556005 STK26Q9P289 416 aa13.55□□□□□ -0.24
EFCAB11-209ENST00000556005 RIMS2Q9UQ26 1411 aa13.55□□□□□ -0.24
EFCAB11-209ENST00000556005 INSRP06213 1382 aa13.54□□□□□ -0.24
EFCAB11-209ENST00000556005 ARHGEF28Q8N1W1 1705 aaKnown RBP13.54□□□□□ -0.24
EFCAB11-209ENST00000556005 CARD14Q9BXL6 1004 aa13.54□□□□□ -0.24
EFCAB11-209ENST00000556005 YTHDC2Q9H6S0 1430 aaKnown RBP13.54□□□□□ -0.24
EFCAB11-209ENST00000556005 ALKQ9UM73 1620 aa13.54□□□□□ -0.24
EFCAB11-209ENST00000556005 TNRQ92752 1358 aa13.53□□□□□ -0.24
EFCAB11-209ENST00000556005 SLC12A5Q9H2X9 1139 aa13.53□□□□□ -0.24
EFCAB11-209ENST00000556005 POGKQ9P215 609 aa13.53□□□□□ -0.24
EFCAB11-209ENST00000556005 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
EFCAB11-209ENST00000556005 PRAM1Q96QH2 718 aa13.51□□□□□ -0.25
EFCAB11-209ENST00000556005 SMG6Q86US8 1419 aaKnown RBP13.51□□□□□ -0.25
EFCAB11-209ENST00000556005 SAFB2Q14151 953 aaKnown RBP eCLIP13.5□□□□□ -0.25
EFCAB11-209ENST00000556005 PTPRMP28827 1452 aa13.5□□□□□ -0.25
EFCAB11-209ENST00000556005 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
EFCAB11-209ENST00000556005 NINLQ9Y2I6 1382 aa13.49□□□□□ -0.25
EFCAB11-209ENST00000556005 CABP2Q9NPB3 220 aa13.49□□□□□ -0.25
EFCAB11-209ENST00000556005 TULP4Q9NRJ4 1543 aa13.49□□□□□ -0.25
EFCAB11-209ENST00000556005 SRPK2P78362 688 aaKnown RBP13.48□□□□□ -0.25
EFCAB11-209ENST00000556005 WDR43Q15061 677 aaKnown RBP eCLIP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms