RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 ABCC2Q92887 1545 aa9.98□□□□□ -0.81
CHD8-209ENST00000555935 FSD2A1L4K1 749 aa9.98□□□□□ -0.81
CHD8-209ENST00000555935 GOLGA6L3A6NEY3 463 aa9.98□□□□□ -0.81
CHD8-209ENST00000555935 AAMPQ13685 434 aa9.98□□□□□ -0.81
CHD8-209ENST00000555935 PKNOX2Q96KN3 472 aa9.98□□□□□ -0.81
CHD8-209ENST00000555935 PNNQ9H307 717 aaKnown RBP9.97□□□□□ -0.81
CHD8-209ENST00000555935 KNSTRNQ9Y448 316 aa9.97□□□□□ -0.81
CHD8-209ENST00000555935 SYNJ2O15056 1496 aa9.97□□□□□ -0.81
CHD8-209ENST00000555935 NPC1L1Q9UHC9 1359 aa9.97□□□□□ -0.81
CHD8-209ENST00000555935 E9PSI1 815 aa9.97□□□□□ -0.81
CHD8-209ENST00000555935 WDR7Q9Y4E6 1490 aa9.96□□□□□ -0.81
CHD8-209ENST00000555935 RRP9O43818 475 aaKnown RBP9.96□□□□□ -0.81
CHD8-209ENST00000555935 SLKQ9H2G2 1235 aaPredicted RBP9.96□□□□□ -0.81
CHD8-209ENST00000555935 IGHDP01880 384 aa9.96□□□□□ -0.82
CHD8-209ENST00000555935 CLUAP1Q96AJ1 413 aa9.96□□□□□ -0.82
CHD8-209ENST00000555935 XRCC6P12956 609 aaKnown RBP eCLIP9.95□□□□□ -0.82
CHD8-209ENST00000555935 CDCA8Q53HL2 280 aa9.95□□□□□ -0.82
CHD8-209ENST00000555935 TBC1D32Q96NH3 1257 aa9.95□□□□□ -0.82
CHD8-209ENST00000555935 MAGI2Q86UL8 1455 aa9.95□□□□□ -0.82
CHD8-209ENST00000555935 PLXNC1O60486 1568 aa9.95□□□□□ -0.82
CHD8-209ENST00000555935 AMER1Q5JTC6 1135 aaPredicted RBP9.95□□□□□ -0.82
CHD8-209ENST00000555935 ISY1Q9ULR0 285 aaKnown RBP9.95□□□□□ -0.82
CHD8-209ENST00000555935 PLB1Q6P1J6 1458 aa9.95□□□□□ -0.82
CHD8-209ENST00000555935 SEC24BO95487 1268 aa9.94□□□□□ -0.82
CHD8-209ENST00000555935 NAP1L5Q96NT1 182 aaPredicted RBP9.94□□□□□ -0.82
CHD8-209ENST00000555935 PLA2R1Q13018 1463 aa9.94□□□□□ -0.82
CHD8-209ENST00000555935 ASXL1Q8IXJ9 1541 aa9.94□□□□□ -0.82
CHD8-209ENST00000555935 SYNMO15061 1565 aa9.94□□□□□ -0.82
CHD8-209ENST00000555935 RNF17Q9BXT8 1623 aaKnown RBP9.94□□□□□ -0.82
CHD8-209ENST00000555935 HSP90AA1P07900 732 aaKnown RBP9.94□□□□□ -0.82
CHD8-209ENST00000555935 PMFBP1Q8TBY8 1022 aa9.94□□□□□ -0.82
CHD8-209ENST00000555935 BCAR3O75815 825 aa9.93□□□□□ -0.82
CHD8-209ENST00000555935 MCM4P33991 863 aa9.93□□□□□ -0.82
CHD8-209ENST00000555935 RGL3Q3MIN7 710 aa9.93□□□□□ -0.82
CHD8-209ENST00000555935 GRIN2AQ12879 1464 aa9.93□□□□□ -0.82
CHD8-209ENST00000555935 MAGI1Q96QZ7 1491 aaPredicted RBP9.93□□□□□ -0.82
CHD8-209ENST00000555935 PLEKHD1A6NEE1 506 aa9.93□□□□□ -0.82
CHD8-209ENST00000555935 MRE11P49959 708 aa9.93□□□□□ -0.82
CHD8-209ENST00000555935 HSP90AA2PQ14568 343 aaPredicted RBP9.93□□□□□ -0.82
CHD8-209ENST00000555935 RSPH4AQ5TD94 716 aa9.93□□□□□ -0.82
CHD8-209ENST00000555935 TBC1D2Q9BYX2 928 aa9.93□□□□□ -0.82
CHD8-209ENST00000555935 ATP10AO60312 1499 aa9.93□□□□□ -0.82
CHD8-209ENST00000555935 UNC13BO14795 1591 aa9.92□□□□□ -0.82
CHD8-209ENST00000555935 CENPJQ9HC77 1338 aaPredicted RBP9.92□□□□□ -0.82
CHD8-209ENST00000555935 CHMP5Q9NZZ3 219 aa9.91□□□□□ -0.82
CHD8-209ENST00000555935 CARMIL2Q6F5E8 1435 aa9.91□□□□□ -0.82
CHD8-209ENST00000555935 IFT140Q96RY7 1462 aa9.91□□□□□ -0.82
CHD8-209ENST00000555935 SPINK5Q9NQ38 1064 aaPredicted RBP9.91□□□□□ -0.82
CHD8-209ENST00000555935 APAF1O14727 1248 aa9.9□□□□□ -0.82
CHD8-209ENST00000555935 CANXP27824 592 aaKnown RBP9.9□□□□□ -0.82
CHD8-209ENST00000555935 MYO5CQ9NQX4 1742 aa9.89□□□□□ -0.83
CHD8-209ENST00000555935 MRC2Q9UBG0 1479 aa9.89□□□□□ -0.83
CHD8-209ENST00000555935 DDX11L8A8MPP1 907 aa9.89□□□□□ -0.83
CHD8-209ENST00000555935 TRAK2O60296 914 aa9.89□□□□□ -0.83
CHD8-209ENST00000555935 HNRNPMP52272 730 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHD8-209ENST00000555935 AEBP2Q6ZN18 517 aaPredicted RBP9.89□□□□□ -0.83
CHD8-209ENST00000555935 CCDC146Q8IYE0 955 aa9.89□□□□□ -0.83
CHD8-209ENST00000555935 ABCA8O94911 1581 aa9.89□□□□□ -0.83
CHD8-209ENST00000555935 IQGAP3Q86VI3 1631 aa9.89□□□□□ -0.83
CHD8-209ENST00000555935 PANK2Q9BZ23 570 aa9.88□□□□□ -0.83
CHD8-209ENST00000555935 COG6Q9Y2V7 657 aa9.88□□□□□ -0.83
CHD8-209ENST00000555935 MAST1Q9Y2H9 1570 aa9.88□□□□□ -0.83
CHD8-209ENST00000555935 VSIG10Q8N0Z9 540 aa9.88□□□□□ -0.83
CHD8-209ENST00000555935 ZMYND15Q9H091 742 aa9.88□□□□□ -0.83
CHD8-209ENST00000555935 MYH16Q9H6N6 1097 aa9.88□□□□□ -0.83
CHD8-209ENST00000555935 SCAPERQ9BY12 1400 aa9.88□□□□□ -0.83
CHD8-209ENST00000555935 IQGAP1P46940 1657 aa9.88□□□□□ -0.83
CHD8-209ENST00000555935 PANK1Q8TE04 598 aa9.87□□□□□ -0.83
CHD8-209ENST00000555935 STAC3Q96MF2 364 aa9.87□□□□□ -0.83
CHD8-209ENST00000555935 ESPNB1AK53 854 aa9.87□□□□□ -0.83
CHD8-209ENST00000555935 RWDD1Q9H446 243 aaPredicted RBP9.87□□□□□ -0.83
CHD8-209ENST00000555935 GRPEL1Q9HAV7 217 aa9.87□□□□□ -0.83
CHD8-209ENST00000555935 ATP10BO94823 1461 aa9.87□□□□□ -0.83
CHD8-209ENST00000555935 SCAF11Q99590 1463 aaKnown RBP9.87□□□□□ -0.83
CHD8-209ENST00000555935 PDZRN3Q9UPQ7 1066 aa9.86□□□□□ -0.83
CHD8-209ENST00000555935 SLC24A1O60721 1099 aa9.86□□□□□ -0.83
CHD8-209ENST00000555935 TPM2P07951 284 aa9.86□□□□□ -0.83
CHD8-209ENST00000555935 GZF1Q9H116 711 aaPredicted RBP9.86□□□□□ -0.83
CHD8-209ENST00000555935 SAMD9LQ8IVG5 1584 aa9.85□□□□□ -0.83
CHD8-209ENST00000555935 PTMSP20962 102 aa9.85□□□□□ -0.83
CHD8-209ENST00000555935 ARXQ96QS3 562 aa9.85□□□□□ -0.83
CHD8-209ENST00000555935 RTEL1-TNFRSF6BF6WH68 1400 aa9.85□□□□□ -0.83
CHD8-209ENST00000555935 MADDQ8WXG6 1647 aa9.85□□□□□ -0.83
CHD8-209ENST00000555935 WWC1Q8IX03 1113 aa9.85□□□□□ -0.83
CHD8-209ENST00000555935 C22orf23Q9BZE7 217 aa9.85□□□□□ -0.83
CHD8-209ENST00000555935 RARSP54136 660 aaKnown RBP9.84□□□□□ -0.83
CHD8-209ENST00000555935 PCDHB15Q9Y5E8 787 aa9.84□□□□□ -0.83
CHD8-209ENST00000555935 DMRT2Q9Y5R5 561 aa9.84□□□□□ -0.83
CHD8-209ENST00000555935 POLR3AO14802 1390 aaPredicted RBP9.84□□□□□ -0.83
CHD8-209ENST00000555935 PREX2Q70Z35 1606 aa9.84□□□□□ -0.83
CHD8-209ENST00000555935 TRIM44Q96DX7 344 aaPredicted RBP9.84□□□□□ -0.83
CHD8-209ENST00000555935 NCOA3Q9Y6Q9 1424 aa9.83□□□□□ -0.84
CHD8-209ENST00000555935 MYOM1P52179 1685 aa9.83□□□□□ -0.84
CHD8-209ENST00000555935 DUOX2Q9NRD8 1548 aa9.83□□□□□ -0.84
CHD8-209ENST00000555935 HSCBQ8IWL3 235 aa9.83□□□□□ -0.84
CHD8-209ENST00000555935 CIZ1Q9ULV3 898 aaPredicted RBP9.83□□□□□ -0.84
CHD8-209ENST00000555935 SKOR2Q2VWA4 1001 aaPredicted RBP9.82□□□□□ -0.84
CHD8-209ENST00000555935 WDR63Q8IWG1 891 aa9.82□□□□□ -0.84
CHD8-209ENST00000555935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.82□□□□□ -0.841e-6■■■□□ 15.8
CHD8-209ENST00000555935 ZNF692Q9BU19 519 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms