RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 CCDC141Q6ZP82 1450 aa22.86■■□□□ 1.25
RCCD1-204ENST00000555737 ABCC10Q5T3U5 1492 aa22.85■■□□□ 1.25
RCCD1-204ENST00000555737 ZMYM4Q5VZL5 1548 aa22.85■■□□□ 1.25
RCCD1-204ENST00000555737 AFAP1Q8N556 730 aa22.85■■□□□ 1.25
RCCD1-204ENST00000555737 CENPJQ9HC77 1338 aaPredicted RBP22.85■■□□□ 1.25
RCCD1-204ENST00000555737 EIF4G3O43432 1585 aaKnown RBP22.85■■□□□ 1.25
RCCD1-204ENST00000555737 CDC42BPAQ5VT25 1732 aa22.83■■□□□ 1.25
RCCD1-204ENST00000555737 CROCC2H7BZ55 1655 aa22.83■■□□□ 1.25
RCCD1-204ENST00000555737 ARHGAP5Q13017 1502 aa22.83■■□□□ 1.25
RCCD1-204ENST00000555737 SYCP2Q9BX26 1530 aa22.81■■□□□ 1.24
RCCD1-204ENST00000555737 CDCA8Q53HL2 280 aa22.81■■□□□ 1.24
RCCD1-204ENST00000555737 E9PSI1 815 aa22.8■■□□□ 1.24
RCCD1-204ENST00000555737 NUTM2DQ5VT03 806 aaPredicted RBP22.8■■□□□ 1.24
RCCD1-204ENST00000555737 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
RCCD1-204ENST00000555737 ZNF521Q96K83 1311 aa22.79■■□□□ 1.24
RCCD1-204ENST00000555737 TRPM1Q7Z4N2 1603 aa22.79■■□□□ 1.24
RCCD1-204ENST00000555737 GPRASP1Q5JY77 1395 aa22.79■■□□□ 1.24
RCCD1-204ENST00000555737 E9PCH4 1651 aa22.79■■□□□ 1.24
RCCD1-204ENST00000555737 RSPH4AQ5TD94 716 aa22.78■■□□□ 1.24
RCCD1-204ENST00000555737 SHANK2Q9UPX8 1470 aa22.78■■□□□ 1.24
RCCD1-204ENST00000555737 SAFB2Q14151 953 aaKnown RBP eCLIP22.77■■□□□ 1.24
RCCD1-204ENST00000555737 BECN1Q14457 450 aa22.77■■□□□ 1.24
RCCD1-204ENST00000555737 CARD14Q9BXL6 1004 aa22.77■■□□□ 1.24
RCCD1-204ENST00000555737 TRAK1Q9UPV9 953 aa22.77■■□□□ 1.24
RCCD1-204ENST00000555737 MORC1Q86VD1 984 aa22.77■■□□□ 1.23
RCCD1-204ENST00000555737 UPF2Q9HAU5 1272 aaKnown RBP22.77■■□□□ 1.23
RCCD1-204ENST00000555737 RLBP1P12271 317 aa22.76■■□□□ 1.23
RCCD1-204ENST00000555737 WWC1Q8IX03 1113 aa22.76■■□□□ 1.23
RCCD1-204ENST00000555737 KIF3BO15066 747 aa22.75■■□□□ 1.23
RCCD1-204ENST00000555737 PCDHB15Q9Y5E8 787 aa22.75■■□□□ 1.23
RCCD1-204ENST00000555737 WDR7Q9Y4E6 1490 aa22.74■■□□□ 1.23
RCCD1-204ENST00000555737 MFAP1P55081 439 aaKnown RBP22.74■■□□□ 1.23
RCCD1-204ENST00000555737 SLC12A5Q9H2X9 1139 aa22.73■■□□□ 1.23
RCCD1-204ENST00000555737 USP19O94966 1318 aa22.73■■□□□ 1.23
RCCD1-204ENST00000555737 NKTRP30414 1462 aaKnown RBP22.72■■□□□ 1.23
RCCD1-204ENST00000555737 PDZRN3Q9UPQ7 1066 aa22.72■■□□□ 1.23
RCCD1-204ENST00000555737 TCP11L2Q8N4U5 519 aa22.72■■□□□ 1.23
RCCD1-204ENST00000555737 SAMD9LQ8IVG5 1584 aa22.72■■□□□ 1.23
RCCD1-204ENST00000555737 CGNL1Q0VF96 1302 aa22.71■■□□□ 1.23
RCCD1-204ENST00000555737 TMEM132EQ6IEE7 984 aa22.71■■□□□ 1.23
RCCD1-204ENST00000555737 SPAG9O60271 1321 aaKnown RBP22.69■■□□□ 1.22
RCCD1-204ENST00000555737 ADCY10Q96PN6 1610 aa22.69■■□□□ 1.22
RCCD1-204ENST00000555737 ADGRF5Q8IZF2 1346 aa22.69■■□□□ 1.22
RCCD1-204ENST00000555737 PRDM15P57071 1507 aaPredicted RBP22.68■■□□□ 1.22
RCCD1-204ENST00000555737 TSR2Q969E8 191 aaKnown RBP22.68■■□□□ 1.22
RCCD1-204ENST00000555737 EFCAB2Q5VUJ9 269 aa22.68■■□□□ 1.22
RCCD1-204ENST00000555737 FTSJ3Q8IY81 847 aaKnown RBP22.68■■□□□ 1.22
RCCD1-204ENST00000555737 U2AF1L5P0DN76 240 aaPredicted RBP22.67■■□□□ 1.22
RCCD1-204ENST00000555737 U2AF1Q01081 240 aaKnown RBP eCLIP22.67■■□□□ 1.224e-12■■□□□ 12.7
RCCD1-204ENST00000555737 ABCA8O94911 1581 aa22.67■■□□□ 1.22
RCCD1-204ENST00000555737 U2SURPO15042 1029 aaKnown RBP22.66■■□□□ 1.22
RCCD1-204ENST00000555737 TRMT2AQ8IZ69 625 aaKnown RBP22.65■■□□□ 1.22
RCCD1-204ENST00000555737 TBC1D2Q9BYX2 928 aa22.65■■□□□ 1.22
RCCD1-204ENST00000555737 MTHFSP49914 203 aa22.65■■□□□ 1.22
RCCD1-204ENST00000555737 RARSP54136 660 aaKnown RBP22.65■■□□□ 1.22
RCCD1-204ENST00000555737 FOXD4L1Q9NU39 408 aa22.64■■□□□ 1.21
RCCD1-204ENST00000555737 MAPK8IP3Q9UPT6 1336 aa22.64■■□□□ 1.21
RCCD1-204ENST00000555737 PDE3AQ14432 1141 aa22.63■■□□□ 1.21
RCCD1-204ENST00000555737 EIF3AQ14152 1382 aaKnown RBP22.63■■□□□ 1.21
RCCD1-204ENST00000555737 ASXL1Q8IXJ9 1541 aa22.62■■□□□ 1.21
RCCD1-204ENST00000555737 PANK2Q9BZ23 570 aa22.62■■□□□ 1.21
RCCD1-204ENST00000555737 NUP160Q12769 1436 aa22.61■■□□□ 1.21
RCCD1-204ENST00000555737 ITPRIPQ8IWB1 547 aa22.6■■□□□ 1.21
RCCD1-204ENST00000555737 PMFBP1Q8TBY8 1022 aa22.59■■□□□ 1.21
RCCD1-204ENST00000555737 RRAGDQ9NQL2 400 aaPredicted RBP22.59■■□□□ 1.21
RCCD1-204ENST00000555737 TRAPPC8Q9Y2L5 1435 aa22.59■■□□□ 1.21
RCCD1-204ENST00000555737 SCAF11Q99590 1463 aaKnown RBP22.58■■□□□ 1.21
RCCD1-204ENST00000555737 RWDD1Q9H446 243 aaPredicted RBP22.58■■□□□ 1.2
RCCD1-204ENST00000555737 SMC4Q9NTJ3 1288 aa22.58■■□□□ 1.2
RCCD1-204ENST00000555737 RUNDC1Q96C34 613 aa22.57■■□□□ 1.2
RCCD1-204ENST00000555737 NAP1L5Q96NT1 182 aaPredicted RBP22.57■■□□□ 1.2
RCCD1-204ENST00000555737 CDC42BPBQ9Y5S2 1711 aa22.56■■□□□ 1.2
RCCD1-204ENST00000555737 ARHGEF5Q12774 1597 aa22.55■■□□□ 1.2
RCCD1-204ENST00000555737 TTC37Q6PGP7 1564 aa22.55■■□□□ 1.2
RCCD1-204ENST00000555737 STK26Q9P289 416 aa22.54■■□□□ 1.2
RCCD1-204ENST00000555737 PIK3C2GO75747 1445 aa22.54■■□□□ 1.2
RCCD1-204ENST00000555737 GGT6Q6P531 493 aa22.54■■□□□ 1.2
RCCD1-204ENST00000555737 FAM43AQ8N2R8 423 aa22.53■■□□□ 1.2
RCCD1-204ENST00000555737 UBE2Q2Q8WVN8 375 aa22.53■■□□□ 1.2
RCCD1-204ENST00000555737 TBC1D32Q96NH3 1257 aa22.53■■□□□ 1.2
RCCD1-204ENST00000555737 NSD3Q9BZ95 1437 aa22.53■■□□□ 1.2
RCCD1-204ENST00000555737 GOLGA6L3A6NEY3 463 aa22.53■■□□□ 1.2
RCCD1-204ENST00000555737 INSRP06213 1382 aa22.53■■□□□ 1.2
RCCD1-204ENST00000555737 C22orf23Q9BZE7 217 aa22.53■■□□□ 1.2
RCCD1-204ENST00000555737 MYO5CQ9NQX4 1742 aa22.53■■□□□ 1.2
RCCD1-204ENST00000555737 EXOSC9Q06265 439 aaKnown RBP22.52■■□□□ 1.2
RCCD1-204ENST00000555737 CFAP53Q96M91 514 aa22.51■■□□□ 1.19
RCCD1-204ENST00000555737 DZIP1LQ8IYY4 767 aaKnown RBP22.5■■□□□ 1.19
RCCD1-204ENST00000555737 HSP90AA1P07900 732 aaKnown RBP22.5■■□□□ 1.19
RCCD1-204ENST00000555737 XRCC6P12956 609 aaKnown RBP eCLIP22.5■■□□□ 1.19
RCCD1-204ENST00000555737 CABP2Q9NPB3 220 aa22.5■■□□□ 1.19
RCCD1-204ENST00000555737 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.49■■□□□ 1.191e-6■■■■■ 42.9
RCCD1-204ENST00000555737 EIF2AK4Q9P2K8 1649 aaKnown RBP22.49■■□□□ 1.19
RCCD1-204ENST00000555737 LNPKQ9C0E8 428 aa22.49■■□□□ 1.19
RCCD1-204ENST00000555737 ZKSCAN2Q63HK3 967 aa22.48■■□□□ 1.19
RCCD1-204ENST00000555737 GGNBP2Q9H3C7 697 aa22.48■■□□□ 1.19
RCCD1-204ENST00000555737 ANTXR1Q9H6X2 564 aa22.48■■□□□ 1.19
RCCD1-204ENST00000555737 UGGT1Q9NYU2 1555 aa22.48■■□□□ 1.19
RCCD1-204ENST00000555737 L1TD1Q5T7N2 865 aaKnown RBP22.48■■□□□ 1.19
RCCD1-204ENST00000555737 MCM4P33991 863 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms