RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 CNTLNQ9NXG0 1405 aa13.91□□□□□ -0.18
SIX1-204ENST00000555627 ERVK-7P63135 1459 aa13.9□□□□□ -0.18
SIX1-204ENST00000555627 KIAA1210Q9ULL0 1709 aa13.9□□□□□ -0.18
SIX1-204ENST00000555627 RALGAPBQ86X10 1494 aa13.89□□□□□ -0.19
SIX1-204ENST00000555627 TMEM131LA2VDJ0 1609 aa13.89□□□□□ -0.19
SIX1-204ENST00000555627 SETD1BQ9UPS6 1966 aaKnown RBP13.88□□□□□ -0.19
SIX1-204ENST00000555627 KDM5AP29375 1690 aaKnown RBP13.87□□□□□ -0.19
SIX1-204ENST00000555627 IQGAP1P46940 1657 aa13.87□□□□□ -0.19
SIX1-204ENST00000555627 TOM1O60784 492 aa13.86□□□□□ -0.19
SIX1-204ENST00000555627 PPP1R15AO75807 674 aaPredicted RBP13.86□□□□□ -0.19
SIX1-204ENST00000555627 L3MBTL2Q969R5 705 aa13.86□□□□□ -0.19
SIX1-204ENST00000555627 SETD1AO15047 1707 aaKnown RBP13.86□□□□□ -0.19
SIX1-204ENST00000555627 NEXMIFQ5QGS0 1516 aa13.85□□□□□ -0.19
SIX1-204ENST00000555627 MYOM2P54296 1465 aa13.85□□□□□ -0.19
SIX1-204ENST00000555627 PRAG1Q86YV5 1406 aa13.84□□□□□ -0.19
SIX1-204ENST00000555627 GGT6Q6P531 493 aa13.84□□□□□ -0.19
SIX1-204ENST00000555627 POTEAQ6S8J7 498 aa13.83□□□□□ -0.2
SIX1-204ENST00000555627 UBR1Q8IWV7 1749 aa13.83□□□□□ -0.2
SIX1-204ENST00000555627 NRXN1Q9ULB1 1477 aa13.82□□□□□ -0.2
SIX1-204ENST00000555627 MYO3AQ8NEV4 1616 aa13.82□□□□□ -0.2
SIX1-204ENST00000555627 NBPF8Q3BBV2 869 aa13.81□□□□□ -0.2
SIX1-204ENST00000555627 NCKAP5LQ9HCH0 1330 aa13.8□□□□□ -0.2
SIX1-204ENST00000555627 WASHC2CQ9Y4E1 1318 aa13.8□□□□□ -0.2
SIX1-204ENST00000555627 ZNF142P52746 1687 aaPredicted RBP13.79□□□□□ -0.2
SIX1-204ENST00000555627 ALKQ9UM73 1620 aa13.77□□□□□ -0.21
SIX1-204ENST00000555627 PPP6R1Q9UPN7 881 aa13.77□□□□□ -0.21
SIX1-204ENST00000555627 NRXN3Q9Y4C0 1643 aa13.76□□□□□ -0.21
SIX1-204ENST00000555627 ASXL1Q8IXJ9 1541 aa13.75□□□□□ -0.21
SIX1-204ENST00000555627 GPRASP1Q5JY77 1395 aa13.75□□□□□ -0.21
SIX1-204ENST00000555627 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
SIX1-204ENST00000555627 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
SIX1-204ENST00000555627 ARHGEF28Q8N1W1 1705 aaKnown RBP13.73□□□□□ -0.21
SIX1-204ENST00000555627 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
SIX1-204ENST00000555627 PIK3C2GO75747 1445 aa13.73□□□□□ -0.21
SIX1-204ENST00000555627 ADGRB1O14514 1584 aa13.72□□□□□ -0.21
SIX1-204ENST00000555627 A2ML1A8K2U0 1454 aa13.72□□□□□ -0.21
SIX1-204ENST00000555627 CPS1P31327 1500 aa13.71□□□□□ -0.21
SIX1-204ENST00000555627 ZMYM3Q14202 1370 aa13.71□□□□□ -0.22
SIX1-204ENST00000555627 FBXO31Q5XUX0 539 aaPredicted RBP13.69□□□□□ -0.22
SIX1-204ENST00000555627 KNDC1Q76NI1 1749 aa13.68□□□□□ -0.22
SIX1-204ENST00000555627 CEP170BQ9Y4F5 1589 aaPredicted RBP13.68□□□□□ -0.22
SIX1-204ENST00000555627 ZFYVE9O95405 1425 aa13.68□□□□□ -0.22
SIX1-204ENST00000555627 DCAF11Q8TEB1 546 aa13.68□□□□□ -0.22
SIX1-204ENST00000555627 QRICH2Q9H0J4 1663 aa13.68□□□□□ -0.22
SIX1-204ENST00000555627 TNRQ92752 1358 aa13.68□□□□□ -0.22
SIX1-204ENST00000555627 NLRP1Q9C000 1473 aa13.67□□□□□ -0.22
SIX1-204ENST00000555627 RGL3Q3MIN7 710 aa13.67□□□□□ -0.22
SIX1-204ENST00000555627 USP47Q96K76 1375 aa13.67□□□□□ -0.22
SIX1-204ENST00000555627 MYOM1P52179 1685 aa13.66□□□□□ -0.22
SIX1-204ENST00000555627 IDI1Q13907 227 aa13.65□□□□□ -0.22
SIX1-204ENST00000555627 SLIT1O75093 1534 aa13.64□□□□□ -0.23
SIX1-204ENST00000555627 ROCK2O75116 1388 aaKnown RBP13.64□□□□□ -0.23
SIX1-204ENST00000555627 SLC52A1Q9NWF4 448 aa13.64□□□□□ -0.23
SIX1-204ENST00000555627 ADGRF5Q8IZF2 1346 aa13.64□□□□□ -0.23
SIX1-204ENST00000555627 ARHGAP23Q9P227 1491 aa13.63□□□□□ -0.23
SIX1-204ENST00000555627 HSPA5P11021 654 aaKnown RBP13.63□□□□□ -0.23
SIX1-204ENST00000555627 ZNF326Q5BKZ1 582 aaKnown RBP13.63□□□□□ -0.23
SIX1-204ENST00000555627 KDM2AQ9Y2K7 1162 aa13.63□□□□□ -0.23
SIX1-204ENST00000555627 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
SIX1-204ENST00000555627 SCAF11Q99590 1463 aaKnown RBP13.61□□□□□ -0.23
SIX1-204ENST00000555627 RIMS2Q9UQ26 1411 aa13.61□□□□□ -0.23
SIX1-204ENST00000555627 ESF1Q9H501 851 aaKnown RBP13.6□□□□□ -0.23
SIX1-204ENST00000555627 RPGRIP1LQ68CZ1 1315 aa13.6□□□□□ -0.23
SIX1-204ENST00000555627 NBPF1Q3BBV0 1214 aa13.59□□□□□ -0.23
SIX1-204ENST00000555627 STAC3Q96MF2 364 aa13.59□□□□□ -0.23
SIX1-204ENST00000555627 HIRIP3Q9BW71 556 aaPredicted RBP13.59□□□□□ -0.23
SIX1-204ENST00000555627 EIF4G2P78344 907 aaKnown RBP eCLIP13.58□□□□□ -0.24
SIX1-204ENST00000555627 CCDC7Q96M83 1385 aa13.57□□□□□ -0.24
SIX1-204ENST00000555627 CHGAP10645 457 aaKnown RBP13.56□□□□□ -0.24
SIX1-204ENST00000555627 DIP2AQ14689 1571 aa13.56□□□□□ -0.24
SIX1-204ENST00000555627 XRN1Q8IZH2 1706 aaKnown RBP13.56□□□□□ -0.24
SIX1-204ENST00000555627 CARD11Q9BXL7 1154 aa13.55□□□□□ -0.24
SIX1-204ENST00000555627 WASHC2AQ641Q2 1341 aa13.55□□□□□ -0.24
SIX1-204ENST00000555627 DLC1Q96QB1 1528 aa13.54□□□□□ -0.24
SIX1-204ENST00000555627 TMEM2Q9UHN6 1383 aa13.54□□□□□ -0.24
SIX1-204ENST00000555627 C11orf95C9JLR9 678 aaPredicted RBP13.53□□□□□ -0.24
SIX1-204ENST00000555627 IFFO2Q5TF58 517 aa13.53□□□□□ -0.24
SIX1-204ENST00000555627 MED14O60244 1454 aa13.53□□□□□ -0.24
SIX1-204ENST00000555627 TULP4Q9NRJ4 1543 aa13.53□□□□□ -0.24
SIX1-204ENST00000555627 CFAP70Q5T0N1 1121 aa13.52□□□□□ -0.25
SIX1-204ENST00000555627 DIEXFQ68CQ4 756 aaKnown RBP13.52□□□□□ -0.25
SIX1-204ENST00000555627 ADAMTS13Q76LX8 1427 aa13.52□□□□□ -0.25
SIX1-204ENST00000555627 LRRC7Q96NW7 1537 aa13.51□□□□□ -0.25
SIX1-204ENST00000555627 SBNO2Q9Y2G9 1366 aa13.51□□□□□ -0.25
SIX1-204ENST00000555627 KIF7Q2M1P5 1343 aa13.51□□□□□ -0.25
SIX1-204ENST00000555627 TESK2Q96S53 571 aa13.5□□□□□ -0.25
SIX1-204ENST00000555627 C14orf93Q9H972 538 aaKnown RBP13.5□□□□□ -0.25
SIX1-204ENST00000555627 NUTM2DQ5VT03 806 aaPredicted RBP13.49□□□□□ -0.25
SIX1-204ENST00000555627 CHD2O14647 1828 aaKnown RBP13.48□□□□□ -0.25
SIX1-204ENST00000555627 PLEKHG1Q9ULL1 1385 aa13.48□□□□□ -0.25
SIX1-204ENST00000555627 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
SIX1-204ENST00000555627 ADRA2BP18089 450 aa13.48□□□□□ -0.25
SIX1-204ENST00000555627 ADGRB2O60241 1585 aa13.48□□□□□ -0.25
SIX1-204ENST00000555627 TECPR2O15040 1411 aa13.47□□□□□ -0.25
SIX1-204ENST00000555627 YTHDC2Q9H6S0 1430 aaKnown RBP13.47□□□□□ -0.25
SIX1-204ENST00000555627 EIF3AQ14152 1382 aaKnown RBP13.47□□□□□ -0.25
SIX1-204ENST00000555627 VGFO15240 615 aaPredicted RBP13.47□□□□□ -0.25
SIX1-204ENST00000555627 TOPAZ1Q8N9V7 1692 aa13.46□□□□□ -0.26
SIX1-204ENST00000555627 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.45□□□□□ -0.26
SIX1-204ENST00000555627 NWD1Q149M9 1564 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms