RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 FGD6Q6ZV73 1430 aa16.92■□□□□ 0.3
TDP1-212ENST00000555565 ADGRB3O60242 1522 aa16.91■□□□□ 0.3
TDP1-212ENST00000555565 ZFYVE9O95405 1425 aa16.91■□□□□ 0.3
TDP1-212ENST00000555565 ZNF772Q68DY9 489 aaPredicted RBP16.91■□□□□ 0.3
TDP1-212ENST00000555565 TRIM52Q96A61 297 aa16.91■□□□□ 0.3
TDP1-212ENST00000555565 SLC52A1Q9NWF4 448 aa16.91■□□□□ 0.3
TDP1-212ENST00000555565 KANK1Q14678 1352 aa16.9■□□□□ 0.3
TDP1-212ENST00000555565 PTPN23Q9H3S7 1636 aa16.9■□□□□ 0.3
TDP1-212ENST00000555565 SRCAPQ6ZRS2 3230 aa16.9■□□□□ 0.3
TDP1-212ENST00000555565 CHD2O14647 1828 aaKnown RBP16.89■□□□□ 0.29
TDP1-212ENST00000555565 NCOA3Q9Y6Q9 1424 aa16.89■□□□□ 0.29
TDP1-212ENST00000555565 PLEKHG1Q9ULL1 1385 aa16.89■□□□□ 0.29
TDP1-212ENST00000555565 TBX22Q9Y458 520 aa16.88■□□□□ 0.29
TDP1-212ENST00000555565 CROCC2H7BZ55 1655 aa16.88■□□□□ 0.29
TDP1-212ENST00000555565 DAPK1P53355 1430 aa16.87■□□□□ 0.29
TDP1-212ENST00000555565 BCANQ96GW7 911 aa16.87■□□□□ 0.29
TDP1-212ENST00000555565 AHDC1Q5TGY3 1603 aaPredicted RBP16.86■□□□□ 0.29
TDP1-212ENST00000555565 RXRBP28702 533 aa16.86■□□□□ 0.29
TDP1-212ENST00000555565 MEX3CQ5U5Q3 659 aaKnown RBP16.84■□□□□ 0.29
TDP1-212ENST00000555565 C19orf44Q9H6X5 657 aa16.84■□□□□ 0.29
TDP1-212ENST00000555565 CDK12Q9NYV4 1490 aaPredicted RBP16.84■□□□□ 0.29
TDP1-212ENST00000555565 SHPRHQ149N8 1683 aa16.84■□□□□ 0.29
TDP1-212ENST00000555565 DIP2AQ14689 1571 aa16.83■□□□□ 0.28
TDP1-212ENST00000555565 ADAMTS13Q76LX8 1427 aa16.83■□□□□ 0.28
TDP1-212ENST00000555565 CADPS2Q86UW7 1296 aa16.83■□□□□ 0.28
TDP1-212ENST00000555565 CHIC2Q9UKJ5 165 aa16.83■□□□□ 0.28
TDP1-212ENST00000555565 RIMS2Q9UQ26 1411 aa16.83■□□□□ 0.28
TDP1-212ENST00000555565 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.82■□□□□ 0.28
TDP1-212ENST00000555565 ANKRD30AQ9BXX3 1397 aa16.81■□□□□ 0.28
TDP1-212ENST00000555565 BRINP3Q76B58 766 aa16.81■□□□□ 0.28
TDP1-212ENST00000555565 TMEM131LA2VDJ0 1609 aa16.81■□□□□ 0.28
TDP1-212ENST00000555565 RPRD2Q5VT52 1461 aaKnown RBP16.8■□□□□ 0.28
TDP1-212ENST00000555565 HDGFP51858 240 aaKnown RBP16.79■□□□□ 0.28
TDP1-212ENST00000555565 MYO5BQ9ULV0 1848 aa16.79■□□□□ 0.28
TDP1-212ENST00000555565 AFF2P51816 1311 aa16.78■□□□□ 0.28
TDP1-212ENST00000555565 NUTM2BA6NNL0 878 aaPredicted RBP16.78■□□□□ 0.28
TDP1-212ENST00000555565 NUTM2EB1AL46 878 aaPredicted RBP16.78■□□□□ 0.28
TDP1-212ENST00000555565 PPP1R15AO75807 674 aaPredicted RBP16.78■□□□□ 0.28
TDP1-212ENST00000555565 ATF3P18847 181 aa16.78■□□□□ 0.28
TDP1-212ENST00000555565 NUTM2AQ8IVF1 878 aaPredicted RBP16.78■□□□□ 0.28
TDP1-212ENST00000555565 PIK3R4Q99570 1358 aa16.77■□□□□ 0.28
TDP1-212ENST00000555565 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.28
TDP1-212ENST00000555565 C14orf37Q86TY3 774 aa16.77■□□□□ 0.28
TDP1-212ENST00000555565 PTPRUQ92729 1446 aa16.77■□□□□ 0.27
TDP1-212ENST00000555565 SETD5Q9C0A6 1442 aa16.76■□□□□ 0.27
TDP1-212ENST00000555565 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.75■□□□□ 0.27
TDP1-212ENST00000555565 AMOTL2Q9Y2J4 779 aa16.75■□□□□ 0.27
TDP1-212ENST00000555565 GCC2Q8IWJ2 1684 aa16.75■□□□□ 0.27
TDP1-212ENST00000555565 ADGRL2O95490 1459 aa16.74■□□□□ 0.27
TDP1-212ENST00000555565 RGS12O14924 1447 aa16.74■□□□□ 0.27
TDP1-212ENST00000555565 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
TDP1-212ENST00000555565 QTRT2Q9H974 415 aaKnown RBP16.73■□□□□ 0.27
TDP1-212ENST00000555565 RBM6P78332 1123 aaKnown RBP16.72■□□□□ 0.27
TDP1-212ENST00000555565 ANKRD50Q9ULJ7 1429 aa16.71■□□□□ 0.27
TDP1-212ENST00000555565 ASXL1Q8IXJ9 1541 aa16.71■□□□□ 0.27
TDP1-212ENST00000555565 DCCP43146 1447 aa16.7■□□□□ 0.26
TDP1-212ENST00000555565 MST1RQ04912 1400 aa16.7■□□□□ 0.26
TDP1-212ENST00000555565 LRRC59Q96AG4 307 aaKnown RBP16.7■□□□□ 0.26
TDP1-212ENST00000555565 CHGAP10645 457 aaKnown RBP16.69■□□□□ 0.26
TDP1-212ENST00000555565 DDX17Q92841 729 aaKnown RBP16.69■□□□□ 0.26
TDP1-212ENST00000555565 PNPLA6Q8IY17 1366 aa16.68■□□□□ 0.26
TDP1-212ENST00000555565 NHSL1Q5SYE7 1610 aa16.68■□□□□ 0.26
TDP1-212ENST00000555565 C8orf37Q96NL8 207 aa16.68■□□□□ 0.26
TDP1-212ENST00000555565 TRPM2O94759 1503 aa16.67■□□□□ 0.26
TDP1-212ENST00000555565 UNC13BO14795 1591 aa16.65■□□□□ 0.26
TDP1-212ENST00000555565 XRN1Q8IZH2 1706 aaKnown RBP16.65■□□□□ 0.26
TDP1-212ENST00000555565 E9PCH4 1651 aa16.64■□□□□ 0.25
TDP1-212ENST00000555565 NRXN3Q9Y4C0 1643 aa16.63■□□□□ 0.25
TDP1-212ENST00000555565 METP08581 1390 aa16.63■□□□□ 0.25
TDP1-212ENST00000555565 NGLY1Q96IV0 654 aa16.61■□□□□ 0.25
TDP1-212ENST00000555565 SETBP1Q9Y6X0 1596 aa16.6■□□□□ 0.25
TDP1-212ENST00000555565 ADAMTS2O95450 1211 aa16.6■□□□□ 0.25
TDP1-212ENST00000555565 PPARGC1BQ86YN6 1023 aaKnown RBP16.6■□□□□ 0.25
TDP1-212ENST00000555565 ATAD2Q6PL18 1390 aa16.6■□□□□ 0.25
TDP1-212ENST00000555565 FNBP4Q8N3X1 1017 aaPredicted RBP16.59■□□□□ 0.25
TDP1-212ENST00000555565 EP400Q96L91 3159 aa16.59■□□□□ 0.25
TDP1-212ENST00000555565 ROCK1Q13464 1354 aa16.59■□□□□ 0.25
TDP1-212ENST00000555565 ADGRL3Q9HAR2 1447 aa16.59■□□□□ 0.25
TDP1-212ENST00000555565 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
TDP1-212ENST00000555565 USP21Q9UK80 565 aa16.57■□□□□ 0.24
TDP1-212ENST00000555565 LAMC1P11047 1609 aa16.56■□□□□ 0.24
TDP1-212ENST00000555565 C1orf167Q5SNV9 1468 aa16.56■□□□□ 0.24
TDP1-212ENST00000555565 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
TDP1-212ENST00000555565 TRPC5Q9UL62 973 aaPredicted RBP16.55■□□□□ 0.24
TDP1-212ENST00000555565 IQGAP3Q86VI3 1631 aa16.55■□□□□ 0.24
TDP1-212ENST00000555565 ATRNO75882 1429 aa16.54■□□□□ 0.24
TDP1-212ENST00000555565 ITGAEP38570 1179 aa16.54■□□□□ 0.24
TDP1-212ENST00000555565 ORAI2Q96SN7 254 aa16.54■□□□□ 0.24
TDP1-212ENST00000555565 NALCNQ8IZF0 1738 aa16.53■□□□□ 0.24
TDP1-212ENST00000555565 PTCH1Q13635 1447 aa16.53■□□□□ 0.24
TDP1-212ENST00000555565 NUP155O75694 1391 aa16.52■□□□□ 0.24
TDP1-212ENST00000555565 BCL9LQ86UU0 1499 aa16.51■□□□□ 0.23
TDP1-212ENST00000555565 CCDC125Q86Z20 511 aa16.51■□□□□ 0.23
TDP1-212ENST00000555565 FOXD1Q16676 465 aa16.48■□□□□ 0.23
TDP1-212ENST00000555565 ROBO2Q9HCK4 1378 aa16.48■□□□□ 0.23
TDP1-212ENST00000555565 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
TDP1-212ENST00000555565 NEXMIFQ5QGS0 1516 aa16.47■□□□□ 0.23
TDP1-212ENST00000555565 ZNF326Q5BKZ1 582 aaKnown RBP16.47■□□□□ 0.23
TDP1-212ENST00000555565 MYOM2P54296 1465 aa16.47■□□□□ 0.23
TDP1-212ENST00000555565 RRBP1Q9P2E9 1410 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms