RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 ST20-MTHFSA0A0A6YYL1 179 aa32.28■■■□□ 2.76
STRN3-207ENST00000555358 AGLP35573 1532 aa32.28■■■□□ 2.76
STRN3-207ENST00000555358 NOS1P29475 1434 aa32.28■■■□□ 2.76
STRN3-207ENST00000555358 PPP4R2Q9NY27 417 aa32.27■■■□□ 2.76
STRN3-207ENST00000555358 ARHGAP31Q2M1Z3 1444 aa32.27■■■□□ 2.76
STRN3-207ENST00000555358 SYNMO15061 1565 aa32.25■■■□□ 2.75
STRN3-207ENST00000555358 ADGRB3O60242 1522 aa32.24■■■□□ 2.75
STRN3-207ENST00000555358 LAMC1P11047 1609 aa32.24■■■□□ 2.75
STRN3-207ENST00000555358 CHGAP10645 457 aaKnown RBP32.24■■■□□ 2.75
STRN3-207ENST00000555358 MSH5O43196 834 aa32.23■■■□□ 2.75
STRN3-207ENST00000555358 IFT172Q9UG01 1749 aa32.23■■■□□ 2.75
STRN3-207ENST00000555358 FANCIQ9NVI1 1328 aa32.22■■■□□ 2.75
STRN3-207ENST00000555358 STAC3Q96MF2 364 aa32.2■■■□□ 2.75
STRN3-207ENST00000555358 MLECQ14165 292 aa32.19■■■□□ 2.74
STRN3-207ENST00000555358 PIK3C2BO00750 1634 aa32.19■■■□□ 2.74
STRN3-207ENST00000555358 PREX1Q8TCU6 1659 aa32.17■■■□□ 2.74
STRN3-207ENST00000555358 POLR3GLQ9BT43 218 aa32.17■■■□□ 2.74
STRN3-207ENST00000555358 TRHP20396 242 aaPredicted RBP32.16■■■□□ 2.74
STRN3-207ENST00000555358 ADGRF5Q8IZF2 1346 aa32.16■■■□□ 2.74
STRN3-207ENST00000555358 MYOM2P54296 1465 aa32.16■■■□□ 2.74
STRN3-207ENST00000555358 CLTCQ00610 1675 aaKnown RBP32.16■■■□□ 2.74
STRN3-207ENST00000555358 FBXO31Q5XUX0 539 aaPredicted RBP32.12■■■□□ 2.73
STRN3-207ENST00000555358 PPLO60437 1756 aa32.12■■■□□ 2.73
STRN3-207ENST00000555358 IDI1Q13907 227 aa32.11■■■□□ 2.73
STRN3-207ENST00000555358 PPP6R1Q9UPN7 881 aa32.1■■■□□ 2.73
STRN3-207ENST00000555358 KIAA1210Q9ULL0 1709 aa32.09■■■□□ 2.73
STRN3-207ENST00000555358 ARID4BQ4LE39 1312 aaPredicted RBP32.09■■■□□ 2.73
STRN3-207ENST00000555358 IQGAP1P46940 1657 aa32.08■■■□□ 2.73
STRN3-207ENST00000555358 SMG6Q86US8 1419 aaKnown RBP32.08■■■□□ 2.73
STRN3-207ENST00000555358 CFAP70Q5T0N1 1121 aa32.07■■■□□ 2.72
STRN3-207ENST00000555358 NRXN1Q9ULB1 1477 aa32.07■■■□□ 2.72
STRN3-207ENST00000555358 TESK2Q96S53 571 aa32.05■■■□□ 2.72
STRN3-207ENST00000555358 ERVK-7P63135 1459 aa32.05■■■□□ 2.72
STRN3-207ENST00000555358 MYO5BQ9ULV0 1848 aa32.05■■■□□ 2.72
STRN3-207ENST00000555358 B4GALNT3Q6L9W6 998 aa32.04■■■□□ 2.72
STRN3-207ENST00000555358 SLC52A1Q9NWF4 448 aa32.04■■■□□ 2.72
STRN3-207ENST00000555358 DNAJC5Q9H3Z4 198 aa32■■■□□ 2.71
STRN3-207ENST00000555358 SCAF11Q99590 1463 aaKnown RBP32■■■□□ 2.71
STRN3-207ENST00000555358 RPGRIP1LQ68CZ1 1315 aa32■■■□□ 2.71
STRN3-207ENST00000555358 NUTM2DQ5VT03 806 aaPredicted RBP32■■■□□ 2.71
STRN3-207ENST00000555358 NEXMIFQ5QGS0 1516 aa31.98■■■□□ 2.71
STRN3-207ENST00000555358 DISP3Q9P2K9 1392 aa31.98■■■□□ 2.71
STRN3-207ENST00000555358 TMEM131LA2VDJ0 1609 aa31.98■■■□□ 2.71
STRN3-207ENST00000555358 PIK3C2GO75747 1445 aa31.97■■■□□ 2.71
STRN3-207ENST00000555358 RNF123Q5XPI4 1314 aa31.94■■■□□ 2.7
STRN3-207ENST00000555358 NUDCQ9Y266 331 aa31.94■■■□□ 2.7
STRN3-207ENST00000555358 SPATA31D1Q6ZQQ2 1576 aa31.93■■■□□ 2.7
STRN3-207ENST00000555358 ESF1Q9H501 851 aaKnown RBP31.92■■■□□ 2.7
STRN3-207ENST00000555358 ZMYM3Q14202 1370 aa31.9■■■□□ 2.7
STRN3-207ENST00000555358 CNGB1Q14028 1251 aaPredicted RBP31.9■■■□□ 2.7
STRN3-207ENST00000555358 PNISRQ8TF01 805 aaKnown RBP31.9■■■□□ 2.7
STRN3-207ENST00000555358 C14orf93Q9H972 538 aaKnown RBP31.89■■■□□ 2.7
STRN3-207ENST00000555358 VGFO15240 615 aaPredicted RBP31.88■■■□□ 2.69
STRN3-207ENST00000555358 TMF1P82094 1093 aa31.88■■■□□ 2.69
STRN3-207ENST00000555358 SETBP1Q9Y6X0 1596 aa31.86■■■□□ 2.69
STRN3-207ENST00000555358 EIF3AQ14152 1382 aaKnown RBP31.84■■■□□ 2.69
STRN3-207ENST00000555358 TMEM132EQ6IEE7 984 aa31.84■■■□□ 2.69
STRN3-207ENST00000555358 SENP3Q9H4L4 574 aaPredicted RBP31.84■■■□□ 2.69
STRN3-207ENST00000555358 ADGRB1O14514 1584 aa31.84■■■□□ 2.69
STRN3-207ENST00000555358 STAG3Q9UJ98 1225 aa31.82■■■□□ 2.68
STRN3-207ENST00000555358 LRPPRCP42704 1394 aaKnown RBP31.81■■■□□ 2.68
STRN3-207ENST00000555358 ZFYVE9O95405 1425 aa31.8■■■□□ 2.68
STRN3-207ENST00000555358 TMC1Q8TDI8 760 aa31.78■■■□□ 2.68
STRN3-207ENST00000555358 ERICH6Q7L0X2 663 aa31.77■■■□□ 2.68
STRN3-207ENST00000555358 A2ML1A8K2U0 1454 aa31.77■■■□□ 2.68
STRN3-207ENST00000555358 KTN1Q86UP2 1357 aaKnown RBP31.77■■■□□ 2.68
STRN3-207ENST00000555358 TRAK1Q9UPV9 953 aa31.76■■■□□ 2.68
STRN3-207ENST00000555358 BRD4O60885 1362 aaPredicted RBP31.75■■■□□ 2.67
STRN3-207ENST00000555358 MYO3AQ8NEV4 1616 aa31.74■■■□□ 2.67
STRN3-207ENST00000555358 MYBBP1AQ9BQG0 1328 aaKnown RBP31.72■■■□□ 2.67
STRN3-207ENST00000555358 RALBP1Q15311 655 aa31.7■■■□□ 2.67
STRN3-207ENST00000555358 TNRQ92752 1358 aa31.7■■■□□ 2.66
STRN3-207ENST00000555358 BCL11AQ9H165 835 aa31.69■■■□□ 2.66
STRN3-207ENST00000555358 CEBPAP49715 358 aaPredicted RBP31.68■■■□□ 2.66
STRN3-207ENST00000555358 PANK3Q9H999 370 aa31.68■■■□□ 2.66
STRN3-207ENST00000555358 ASXL1Q8IXJ9 1541 aa31.68■■■□□ 2.66
STRN3-207ENST00000555358 CENPJQ9HC77 1338 aaPredicted RBP31.68■■■□□ 2.66
STRN3-207ENST00000555358 SENP3-EIF4A1A0A087X0R7 540 aa31.68■■■□□ 2.66
STRN3-207ENST00000555358 PER1O15534 1290 aaPredicted RBP31.68■■■□□ 2.66
STRN3-207ENST00000555358 CCDC136Q96JN2 1154 aa31.67■■■□□ 2.66
STRN3-207ENST00000555358 RIMS2Q9UQ26 1411 aa31.66■■■□□ 2.66
STRN3-207ENST00000555358 QRICH2Q9H0J4 1663 aa31.65■■■□□ 2.66
STRN3-207ENST00000555358 FER1L4A9Z1Z3 1794 aa31.65■■■□□ 2.66
STRN3-207ENST00000555358 CDCA8Q53HL2 280 aa31.65■■■□□ 2.66
STRN3-207ENST00000555358 KDM5AP29375 1690 aaKnown RBP31.65■■■□□ 2.66
STRN3-207ENST00000555358 ARHGEF28Q8N1W1 1705 aaKnown RBP31.64■■■□□ 2.66
STRN3-207ENST00000555358 MYOM1P52179 1685 aa31.63■■■□□ 2.65
STRN3-207ENST00000555358 C3P01024 1663 aa31.62■■■□□ 2.65
STRN3-207ENST00000555358 SBNO2Q9Y2G9 1366 aa31.62■■■□□ 2.65
STRN3-207ENST00000555358 ALKQ9UM73 1620 aa31.61■■■□□ 2.65
STRN3-207ENST00000555358 PLPPR3Q6T4P5 718 aa31.6■■■□□ 2.65
STRN3-207ENST00000555358 PARD3Q8TEW0 1356 aa31.59■■■□□ 2.65
STRN3-207ENST00000555358 STK26Q9P289 416 aa31.59■■■□□ 2.65
STRN3-207ENST00000555358 UBR1Q8IWV7 1749 aa31.58■■■□□ 2.65
STRN3-207ENST00000555358 SLC24A1O60721 1099 aa31.57■■■□□ 2.64
STRN3-207ENST00000555358 NLRP13Q86W25 1043 aa31.53■■■□□ 2.64
STRN3-207ENST00000555358 PTPRMP28827 1452 aa31.52■■■□□ 2.64
STRN3-207ENST00000555358 YTHDC2Q9H6S0 1430 aaKnown RBP31.52■■■□□ 2.64
STRN3-207ENST00000555358 CC2D1BQ5T0F9 858 aaKnown RBP31.52■■■□□ 2.64
STRN3-207ENST00000555358 SETD1AO15047 1707 aaKnown RBP31.51■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms