RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 ARHGAP31Q2M1Z3 1444 aa13.61□□□□□ -0.23
PRKCH-211ENST00000555082 ZMYM3Q14202 1370 aa13.61□□□□□ -0.23
PRKCH-211ENST00000555082 CLTCQ00610 1675 aaKnown RBP13.61□□□□□ -0.23
PRKCH-211ENST00000555082 USP47Q96K76 1375 aa13.61□□□□□ -0.23
PRKCH-211ENST00000555082 POLR3GLQ9BT43 218 aa13.6□□□□□ -0.23
PRKCH-211ENST00000555082 CFAP70Q5T0N1 1121 aa13.59□□□□□ -0.23
PRKCH-211ENST00000555082 RALGAPBQ86X10 1494 aa13.59□□□□□ -0.23
PRKCH-211ENST00000555082 ST20-MTHFSA0A0A6YYL1 179 aa13.59□□□□□ -0.23
PRKCH-211ENST00000555082 PPP6R1Q9UPN7 881 aa13.59□□□□□ -0.23
PRKCH-211ENST00000555082 WASHC2AQ641Q2 1341 aa13.58□□□□□ -0.24
PRKCH-211ENST00000555082 MROH2AA6NES4 1674 aa13.58□□□□□ -0.24
PRKCH-211ENST00000555082 ERVK-7P63135 1459 aa13.58□□□□□ -0.24
PRKCH-211ENST00000555082 STAG3Q9UJ98 1225 aa13.57□□□□□ -0.24
PRKCH-211ENST00000555082 SLC52A1Q9NWF4 448 aa13.57□□□□□ -0.24
PRKCH-211ENST00000555082 ZC3H13Q5T200 1668 aaKnown RBP13.56□□□□□ -0.24
PRKCH-211ENST00000555082 ADGRB3O60242 1522 aa13.55□□□□□ -0.24
PRKCH-211ENST00000555082 PREX1Q8TCU6 1659 aa13.55□□□□□ -0.24
PRKCH-211ENST00000555082 TMEM132EQ6IEE7 984 aa13.53□□□□□ -0.24
PRKCH-211ENST00000555082 KIF1BO60333 1816 aa13.53□□□□□ -0.24
PRKCH-211ENST00000555082 TRPM1Q7Z4N2 1603 aa13.52□□□□□ -0.24
PRKCH-211ENST00000555082 KIF7Q2M1P5 1343 aa13.52□□□□□ -0.24
PRKCH-211ENST00000555082 FANCIQ9NVI1 1328 aa13.52□□□□□ -0.24
PRKCH-211ENST00000555082 MADDQ8WXG6 1647 aa13.52□□□□□ -0.25
PRKCH-211ENST00000555082 PIK3C2BO00750 1634 aa13.51□□□□□ -0.25
PRKCH-211ENST00000555082 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
PRKCH-211ENST00000555082 B4GALNT3Q6L9W6 998 aa13.5□□□□□ -0.25
PRKCH-211ENST00000555082 GPRASP1Q5JY77 1395 aa13.5□□□□□ -0.25
PRKCH-211ENST00000555082 CCDC7Q96M83 1385 aa13.5□□□□□ -0.25
PRKCH-211ENST00000555082 CNGB1Q14028 1251 aaPredicted RBP13.5□□□□□ -0.25
PRKCH-211ENST00000555082 TNRQ92752 1358 aa13.5□□□□□ -0.25
PRKCH-211ENST00000555082 SPATA31D1Q6ZQQ2 1576 aa13.49□□□□□ -0.25
PRKCH-211ENST00000555082 RPGRIP1LQ68CZ1 1315 aa13.48□□□□□ -0.25
PRKCH-211ENST00000555082 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
PRKCH-211ENST00000555082 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
PRKCH-211ENST00000555082 TRAK1Q9UPV9 953 aa13.48□□□□□ -0.25
PRKCH-211ENST00000555082 MYOM2P54296 1465 aa13.48□□□□□ -0.25
PRKCH-211ENST00000555082 NEXMIFQ5QGS0 1516 aa13.47□□□□□ -0.25
PRKCH-211ENST00000555082 MYO5BQ9ULV0 1848 aa13.47□□□□□ -0.25
PRKCH-211ENST00000555082 STAC3Q96MF2 364 aa13.47□□□□□ -0.25
PRKCH-211ENST00000555082 TESK2Q96S53 571 aa13.47□□□□□ -0.25
PRKCH-211ENST00000555082 TMEM131LA2VDJ0 1609 aa13.47□□□□□ -0.25
PRKCH-211ENST00000555082 C14orf93Q9H972 538 aaKnown RBP13.46□□□□□ -0.25
PRKCH-211ENST00000555082 A2ML1A8K2U0 1454 aa13.46□□□□□ -0.25
PRKCH-211ENST00000555082 PIK3C2GO75747 1445 aa13.46□□□□□ -0.25
PRKCH-211ENST00000555082 NEURL4Q96JN8 1562 aa13.46□□□□□ -0.25
PRKCH-211ENST00000555082 STK26Q9P289 416 aa13.46□□□□□ -0.26
PRKCH-211ENST00000555082 PPP4R2Q9NY27 417 aa13.45□□□□□ -0.26
PRKCH-211ENST00000555082 NRXN1Q9ULB1 1477 aa13.45□□□□□ -0.26
PRKCH-211ENST00000555082 NBR1Q14596 966 aa13.45□□□□□ -0.26
PRKCH-211ENST00000555082 DEKP35659 375 aaKnown RBP13.44□□□□□ -0.26
PRKCH-211ENST00000555082 IFT172Q9UG01 1749 aa13.44□□□□□ -0.26
PRKCH-211ENST00000555082 DISP3Q9P2K9 1392 aa13.44□□□□□ -0.26
PRKCH-211ENST00000555082 PPLO60437 1756 aa13.44□□□□□ -0.26
PRKCH-211ENST00000555082 SENP3-EIF4A1A0A087X0R7 540 aa13.43□□□□□ -0.26
PRKCH-211ENST00000555082 SAFB2Q14151 953 aaKnown RBP eCLIP13.43□□□□□ -0.26
PRKCH-211ENST00000555082 RIMS2Q9UQ26 1411 aa13.43□□□□□ -0.26
PRKCH-211ENST00000555082 FER1L4A9Z1Z3 1794 aa13.42□□□□□ -0.26
PRKCH-211ENST00000555082 SCAF11Q99590 1463 aaKnown RBP13.42□□□□□ -0.26
PRKCH-211ENST00000555082 LTKP29376 864 aa13.41□□□□□ -0.26
PRKCH-211ENST00000555082 C3P01024 1663 aa13.4□□□□□ -0.26
PRKCH-211ENST00000555082 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
PRKCH-211ENST00000555082 RIMS1Q86UR5 1692 aaKnown RBP13.38□□□□□ -0.27
PRKCH-211ENST00000555082 MRS2Q9HD23 443 aa13.38□□□□□ -0.27
PRKCH-211ENST00000555082 TMF1P82094 1093 aa13.38□□□□□ -0.27
PRKCH-211ENST00000555082 ZFYVE9O95405 1425 aa13.38□□□□□ -0.27
PRKCH-211ENST00000555082 ADGRB1O14514 1584 aa13.38□□□□□ -0.27
PRKCH-211ENST00000555082 TMEM2Q9UHN6 1383 aa13.37□□□□□ -0.27
PRKCH-211ENST00000555082 TXNDC2Q86VQ3 553 aa13.37□□□□□ -0.27
PRKCH-211ENST00000555082 LAMC1P11047 1609 aa13.36□□□□□ -0.27
PRKCH-211ENST00000555082 SLC26A8Q96RN1 970 aa13.36□□□□□ -0.27
PRKCH-211ENST00000555082 CENPJQ9HC77 1338 aaPredicted RBP13.36□□□□□ -0.27
PRKCH-211ENST00000555082 ASXL1Q8IXJ9 1541 aa13.36□□□□□ -0.27
PRKCH-211ENST00000555082 IQGAP1P46940 1657 aa13.36□□□□□ -0.27
PRKCH-211ENST00000555082 EIF3AQ14152 1382 aaKnown RBP13.34□□□□□ -0.27
PRKCH-211ENST00000555082 PTPRMP28827 1452 aa13.34□□□□□ -0.27
PRKCH-211ENST00000555082 METP08581 1390 aa13.34□□□□□ -0.27
PRKCH-211ENST00000555082 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.34□□□□□ -0.27
PRKCH-211ENST00000555082 NLRP1Q9C000 1473 aa13.34□□□□□ -0.27
PRKCH-211ENST00000555082 KIAA1210Q9ULL0 1709 aa13.34□□□□□ -0.27
PRKCH-211ENST00000555082 NOP58Q9Y2X3 529 aaKnown RBP13.34□□□□□ -0.27
PRKCH-211ENST00000555082 WAPLQ7Z5K2 1190 aa13.33□□□□□ -0.27
PRKCH-211ENST00000555082 PRAM1Q96QH2 718 aa13.33□□□□□ -0.27
PRKCH-211ENST00000555082 ADAMTSL3P82987 1691 aa13.33□□□□□ -0.28
PRKCH-211ENST00000555082 ALKQ9UM73 1620 aa13.33□□□□□ -0.28
PRKCH-211ENST00000555082 UBR1Q8IWV7 1749 aa13.33□□□□□ -0.28
PRKCH-211ENST00000555082 MINK1Q8N4C8 1332 aaPredicted RBP13.32□□□□□ -0.28
PRKCH-211ENST00000555082 PRKRIP1Q9H875 184 aaPredicted RBP13.32□□□□□ -0.28
PRKCH-211ENST00000555082 PANK3Q9H999 370 aa13.32□□□□□ -0.28
PRKCH-211ENST00000555082 THEMISQ8N1K5 641 aaPredicted RBP13.32□□□□□ -0.28
PRKCH-211ENST00000555082 YTHDC2Q9H6S0 1430 aaKnown RBP13.32□□□□□ -0.28
PRKCH-211ENST00000555082 SETBP1Q9Y6X0 1596 aa13.31□□□□□ -0.28
PRKCH-211ENST00000555082 ERICH6BQ5W0A0 696 aa13.31□□□□□ -0.28
PRKCH-211ENST00000555082 POGKQ9P215 609 aa13.31□□□□□ -0.28
PRKCH-211ENST00000555082 EID1Q9Y6B2 187 aa13.31□□□□□ -0.28
PRKCH-211ENST00000555082 PLEKHH1Q9ULM0 1364 aa13.31□□□□□ -0.28
PRKCH-211ENST00000555082 HDGFP51858 240 aaKnown RBP13.3□□□□□ -0.28
PRKCH-211ENST00000555082 CABP2Q9NPB3 220 aa13.29□□□□□ -0.28
PRKCH-211ENST00000555082 MYO3AQ8NEV4 1616 aa13.28□□□□□ -0.28
PRKCH-211ENST00000555082 TMC1Q8TDI8 760 aa13.28□□□□□ -0.28
PRKCH-211ENST00000555082 NRXN3Q9Y4C0 1643 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms