RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 PARD3Q8TEW0 1356 aa19.95■□□□□ 0.78
XRCC3-211ENST00000555055 LAMC1P11047 1609 aa19.95■□□□□ 0.78
XRCC3-211ENST00000555055 NOS1P29475 1434 aa19.95■□□□□ 0.78
XRCC3-211ENST00000555055 FAM69CQ0P6D2 419 aa19.95■□□□□ 0.78
XRCC3-211ENST00000555055 YEATS2Q9ULM3 1422 aa19.95■□□□□ 0.78
XRCC3-211ENST00000555055 HECW2Q9P2P5 1572 aa19.95■□□□□ 0.78
XRCC3-211ENST00000555055 NLRP13Q86W25 1043 aa19.94■□□□□ 0.78
XRCC3-211ENST00000555055 SCAF11Q99590 1463 aaKnown RBP19.94■□□□□ 0.78
XRCC3-211ENST00000555055 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
XRCC3-211ENST00000555055 MLH3Q9UHC1 1453 aa19.93■□□□□ 0.78
XRCC3-211ENST00000555055 BRD4O60885 1362 aaPredicted RBP19.93■□□□□ 0.78
XRCC3-211ENST00000555055 IQGAP1P46940 1657 aa19.91■□□□□ 0.78
XRCC3-211ENST00000555055 B4GALNT3Q6L9W6 998 aa19.91■□□□□ 0.78
XRCC3-211ENST00000555055 KNSTRNQ9Y448 316 aa19.9■□□□□ 0.78
XRCC3-211ENST00000555055 KIF1BO60333 1816 aa19.89■□□□□ 0.78
XRCC3-211ENST00000555055 PPP4R2Q9NY27 417 aa19.89■□□□□ 0.77
XRCC3-211ENST00000555055 LRPPRCP42704 1394 aaKnown RBP19.89■□□□□ 0.77
XRCC3-211ENST00000555055 NUDCQ9Y266 331 aa19.89■□□□□ 0.77
XRCC3-211ENST00000555055 CFAP74Q9C0B2 1584 aa19.87■□□□□ 0.77
XRCC3-211ENST00000555055 MAP3K4Q9Y6R4 1608 aa19.87■□□□□ 0.77
XRCC3-211ENST00000555055 SAFB2Q14151 953 aaKnown RBP eCLIP19.86■□□□□ 0.77
XRCC3-211ENST00000555055 TSPOAP1O95153 1857 aa19.86■□□□□ 0.77
XRCC3-211ENST00000555055 CDCA7LQ96GN5 454 aa19.86■□□□□ 0.77
XRCC3-211ENST00000555055 ABCC3O15438 1527 aa19.85■□□□□ 0.77
XRCC3-211ENST00000555055 NEO1Q92859 1461 aa19.85■□□□□ 0.77
XRCC3-211ENST00000555055 AMER1Q5JTC6 1135 aaPredicted RBP19.85■□□□□ 0.77
XRCC3-211ENST00000555055 DIP2CQ9Y2E4 1556 aa19.85■□□□□ 0.77
XRCC3-211ENST00000555055 FBXO31Q5XUX0 539 aaPredicted RBP19.84■□□□□ 0.77
XRCC3-211ENST00000555055 ERICH6Q7L0X2 663 aa19.84■□□□□ 0.77
XRCC3-211ENST00000555055 SIGLEC1Q9BZZ2 1709 aa19.84■□□□□ 0.77
XRCC3-211ENST00000555055 IDI1Q13907 227 aa19.84■□□□□ 0.77
XRCC3-211ENST00000555055 MLECQ14165 292 aa19.84■□□□□ 0.77
XRCC3-211ENST00000555055 SMG6Q86US8 1419 aaKnown RBP19.83■□□□□ 0.77
XRCC3-211ENST00000555055 LMTK2Q8IWU2 1503 aa19.83■□□□□ 0.77
XRCC3-211ENST00000555055 RIMBP3CA6NJZ7 1639 aa19.83■□□□□ 0.77
XRCC3-211ENST00000555055 RIMBP3BA6NNM3 1639 aa19.83■□□□□ 0.77
XRCC3-211ENST00000555055 RIMBP3Q9UFD9 1639 aa19.83■□□□□ 0.77
XRCC3-211ENST00000555055 EIF3AQ14152 1382 aaKnown RBP19.83■□□□□ 0.76
XRCC3-211ENST00000555055 PPP2R1AP30153 589 aa19.82■□□□□ 0.76
XRCC3-211ENST00000555055 ADAMTS8Q9UP79 889 aa19.82■□□□□ 0.76
XRCC3-211ENST00000555055 ADGRB3O60242 1522 aa19.81■□□□□ 0.76
XRCC3-211ENST00000555055 STAC3Q96MF2 364 aa19.81■□□□□ 0.76
XRCC3-211ENST00000555055 MYOM2P54296 1465 aa19.81■□□□□ 0.76
XRCC3-211ENST00000555055 CARD14Q9BXL6 1004 aa19.8■□□□□ 0.76
XRCC3-211ENST00000555055 ERVK-7P63135 1459 aa19.8■□□□□ 0.76
XRCC3-211ENST00000555055 RICTORQ6R327 1708 aa19.8■□□□□ 0.76
XRCC3-211ENST00000555055 TNNT2P45379 298 aaPredicted RBP19.79■□□□□ 0.76
XRCC3-211ENST00000555055 STK26Q9P289 416 aa19.79■□□□□ 0.76
XRCC3-211ENST00000555055 CDCA8Q53HL2 280 aa19.79■□□□□ 0.76
XRCC3-211ENST00000555055 IFT172Q9UG01 1749 aa19.78■□□□□ 0.76
XRCC3-211ENST00000555055 CAMSAP1Q5T5Y3 1602 aa19.78■□□□□ 0.76
XRCC3-211ENST00000555055 CENPJQ9HC77 1338 aaPredicted RBP19.78■□□□□ 0.76
XRCC3-211ENST00000555055 SLC12A5Q9H2X9 1139 aa19.77■□□□□ 0.76
XRCC3-211ENST00000555055 C14orf93Q9H972 538 aaKnown RBP19.77■□□□□ 0.76
XRCC3-211ENST00000555055 MYOM1P52179 1685 aa19.76■□□□□ 0.75
XRCC3-211ENST00000555055 SYNMO15061 1565 aa19.76■□□□□ 0.75
XRCC3-211ENST00000555055 PIK3C2GO75747 1445 aa19.75■□□□□ 0.75
XRCC3-211ENST00000555055 CCDC146Q8IYE0 955 aa19.75■□□□□ 0.75
XRCC3-211ENST00000555055 PRKCSHP14314 528 aaPredicted RBP19.75■□□□□ 0.75
XRCC3-211ENST00000555055 NRXN1Q9ULB1 1477 aa19.74■□□□□ 0.75
XRCC3-211ENST00000555055 PPLO60437 1756 aa19.73■□□□□ 0.75
XRCC3-211ENST00000555055 KIAA1210Q9ULL0 1709 aa19.72■□□□□ 0.75
XRCC3-211ENST00000555055 KDM5AP29375 1690 aaKnown RBP19.72■□□□□ 0.75
XRCC3-211ENST00000555055 WDR43Q15061 677 aaKnown RBP eCLIP19.71■□□□□ 0.75
XRCC3-211ENST00000555055 ASXL1Q8IXJ9 1541 aa19.71■□□□□ 0.75
XRCC3-211ENST00000555055 PLIN1O60240 522 aa19.7■□□□□ 0.74
XRCC3-211ENST00000555055 NEURL4Q96JN8 1562 aa19.7■□□□□ 0.74
XRCC3-211ENST00000555055 DIP2BQ9P265 1576 aa19.69■□□□□ 0.74
XRCC3-211ENST00000555055 CABP2Q9NPB3 220 aa19.69■□□□□ 0.74
XRCC3-211ENST00000555055 ADGRB1O14514 1584 aa19.68■□□□□ 0.74
XRCC3-211ENST00000555055 VGFO15240 615 aaPredicted RBP19.68■□□□□ 0.74
XRCC3-211ENST00000555055 STAG3Q9UJ98 1225 aa19.67■□□□□ 0.74
XRCC3-211ENST00000555055 RCAN3Q9UKA8 241 aa19.67■□□□□ 0.74
XRCC3-211ENST00000555055 MYO5BQ9ULV0 1848 aa19.67■□□□□ 0.74
XRCC3-211ENST00000555055 NEXMIFQ5QGS0 1516 aa19.65■□□□□ 0.74
XRCC3-211ENST00000555055 RNF123Q5XPI4 1314 aa19.65■□□□□ 0.74
XRCC3-211ENST00000555055 BLMP54132 1417 aaPredicted RBP19.65■□□□□ 0.74
XRCC3-211ENST00000555055 PLEKHH1Q9ULM0 1364 aa19.65■□□□□ 0.74
XRCC3-211ENST00000555055 RPGRIP1LQ68CZ1 1315 aa19.64■□□□□ 0.74
XRCC3-211ENST00000555055 NSD3Q9BZ95 1437 aa19.64■□□□□ 0.74
XRCC3-211ENST00000555055 CCDC136Q96JN2 1154 aa19.64■□□□□ 0.73
XRCC3-211ENST00000555055 RRP1P56182 461 aaKnown RBP19.63■□□□□ 0.73
XRCC3-211ENST00000555055 EXOC6Q8TAG9 804 aa19.63■□□□□ 0.73
XRCC3-211ENST00000555055 PIK3C2BO00750 1634 aa19.63■□□□□ 0.73
XRCC3-211ENST00000555055 QRICH2Q9H0J4 1663 aa19.63■□□□□ 0.73
XRCC3-211ENST00000555055 MINK1Q8N4C8 1332 aaPredicted RBP19.63■□□□□ 0.73
XRCC3-211ENST00000555055 GLI2P10070 1586 aa19.62■□□□□ 0.73
XRCC3-211ENST00000555055 SLC52A1Q9NWF4 448 aa19.62■□□□□ 0.73
XRCC3-211ENST00000555055 APAF1O14727 1248 aa19.6■□□□□ 0.73
XRCC3-211ENST00000555055 SETBP1Q9Y6X0 1596 aa19.6■□□□□ 0.73
XRCC3-211ENST00000555055 NOP58Q9Y2X3 529 aaKnown RBP19.6■□□□□ 0.73
XRCC3-211ENST00000555055 ARHGAP31Q2M1Z3 1444 aa19.6■□□□□ 0.73
XRCC3-211ENST00000555055 SRPK2P78362 688 aaKnown RBP19.59■□□□□ 0.73
XRCC3-211ENST00000555055 MORC1Q86VD1 984 aa19.59■□□□□ 0.73
XRCC3-211ENST00000555055 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
XRCC3-211ENST00000555055 PRAM1Q96QH2 718 aa19.59■□□□□ 0.73
XRCC3-211ENST00000555055 PREX1Q8TCU6 1659 aa19.59■□□□□ 0.73
XRCC3-211ENST00000555055 DEKP35659 375 aaKnown RBP19.58■□□□□ 0.72
XRCC3-211ENST00000555055 SPINK5Q9NQ38 1064 aaPredicted RBP19.58■□□□□ 0.72
XRCC3-211ENST00000555055 MYO3AQ8NEV4 1616 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms