RNA–Protein interactions for RNA: ENST00000555015.5

SRP54-AS1-202, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-202ENST00000555015 LTBP4Q8N2S1 1624 aa19■□□□□ 0.63
SRP54-AS1-202ENST00000555015 NPHP4O75161 1426 aaPredicted RBP19■□□□□ 0.63
SRP54-AS1-202ENST00000555015 CHGAP10645 457 aaKnown RBP18.99■□□□□ 0.63
SRP54-AS1-202ENST00000555015 EID1Q9Y6B2 187 aa18.99■□□□□ 0.63
SRP54-AS1-202ENST00000555015 RIMS2Q9UQ26 1411 aa18.99■□□□□ 0.63
SRP54-AS1-202ENST00000555015 PPLO60437 1756 aa18.97■□□□□ 0.63
SRP54-AS1-202ENST00000555015 NEXMIFQ5QGS0 1516 aa18.97■□□□□ 0.63
SRP54-AS1-202ENST00000555015 LTKP29376 864 aa18.97■□□□□ 0.63
SRP54-AS1-202ENST00000555015 TXNDC2Q86VQ3 553 aa18.97■□□□□ 0.63
SRP54-AS1-202ENST00000555015 ANKRD30BQ9BXX2 1392 aa18.96■□□□□ 0.63
SRP54-AS1-202ENST00000555015 IFT172Q9UG01 1749 aa18.96■□□□□ 0.63
SRP54-AS1-202ENST00000555015 HDGFP51858 240 aaKnown RBP18.95■□□□□ 0.62
SRP54-AS1-202ENST00000555015 SPATA31E1Q6ZUB1 1445 aa18.94■□□□□ 0.62
SRP54-AS1-202ENST00000555015 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.94■□□□□ 0.62
SRP54-AS1-202ENST00000555015 ZNF326Q5BKZ1 582 aaKnown RBP18.92■□□□□ 0.62
SRP54-AS1-202ENST00000555015 PLEKHG1Q9ULL1 1385 aa18.92■□□□□ 0.62
SRP54-AS1-202ENST00000555015 DIP2AQ14689 1571 aa18.9■□□□□ 0.62
SRP54-AS1-202ENST00000555015 PPP1R15AO75807 674 aaPredicted RBP18.9■□□□□ 0.62
SRP54-AS1-202ENST00000555015 RPGRIP1LQ68CZ1 1315 aa18.89■□□□□ 0.61
SRP54-AS1-202ENST00000555015 SETBP1Q9Y6X0 1596 aa18.89■□□□□ 0.61
SRP54-AS1-202ENST00000555015 NRXN3Q9Y4C0 1643 aa18.89■□□□□ 0.61
SRP54-AS1-202ENST00000555015 PCGF6Q9BYE7 350 aa18.88■□□□□ 0.61
SRP54-AS1-202ENST00000555015 DHX57Q6P158 1386 aaKnown RBP18.88■□□□□ 0.61
SRP54-AS1-202ENST00000555015 STRCP1A6NGW2 1772 aa18.86■□□□□ 0.61
SRP54-AS1-202ENST00000555015 NUTM2DQ5VT03 806 aaPredicted RBP18.85■□□□□ 0.61
SRP54-AS1-202ENST00000555015 CPS1P31327 1500 aa18.84■□□□□ 0.61
SRP54-AS1-202ENST00000555015 CHD2O14647 1828 aaKnown RBP18.84■□□□□ 0.61
SRP54-AS1-202ENST00000555015 ADAMTS13Q76LX8 1427 aa18.83■□□□□ 0.61
SRP54-AS1-202ENST00000555015 ZNF335Q9H4Z2 1342 aaPredicted RBP18.83■□□□□ 0.61
SRP54-AS1-202ENST00000555015 NWD1Q149M9 1564 aa18.83■□□□□ 0.6
SRP54-AS1-202ENST00000555015 SETD1AO15047 1707 aaKnown RBP18.83■□□□□ 0.6
SRP54-AS1-202ENST00000555015 VGFO15240 615 aaPredicted RBP18.82■□□□□ 0.6
SRP54-AS1-202ENST00000555015 BCANQ96GW7 911 aa18.82■□□□□ 0.6
SRP54-AS1-202ENST00000555015 RGL3Q3MIN7 710 aa18.81■□□□□ 0.6
SRP54-AS1-202ENST00000555015 MYOM2P54296 1465 aa18.81■□□□□ 0.6
SRP54-AS1-202ENST00000555015 SLC26A8Q96RN1 970 aa18.8■□□□□ 0.6
SRP54-AS1-202ENST00000555015 IQSEC2Q5JU85 1478 aa18.79■□□□□ 0.6
SRP54-AS1-202ENST00000555015 ILDR2Q71H61 639 aa18.78■□□□□ 0.6
SRP54-AS1-202ENST00000555015 TBX22Q9Y458 520 aa18.78■□□□□ 0.6
SRP54-AS1-202ENST00000555015 PIK3R4Q99570 1358 aa18.78■□□□□ 0.6
SRP54-AS1-202ENST00000555015 LAMC1P11047 1609 aa18.78■□□□□ 0.6
SRP54-AS1-202ENST00000555015 NRXN1Q9ULB1 1477 aa18.77■□□□□ 0.6
SRP54-AS1-202ENST00000555015 ALKQ9UM73 1620 aa18.77■□□□□ 0.6
SRP54-AS1-202ENST00000555015 NKTRP30414 1462 aaKnown RBP18.77■□□□□ 0.59
SRP54-AS1-202ENST00000555015 PIK3C2GO75747 1445 aa18.76■□□□□ 0.59
SRP54-AS1-202ENST00000555015 XRN1Q8IZH2 1706 aaKnown RBP18.75■□□□□ 0.59
SRP54-AS1-202ENST00000555015 XIRP1Q702N8 1843 aaKnown RBP18.74■□□□□ 0.59
SRP54-AS1-202ENST00000555015 DISP3Q9P2K9 1392 aa18.74■□□□□ 0.59
SRP54-AS1-202ENST00000555015 ADGRF5Q8IZF2 1346 aa18.74■□□□□ 0.59
SRP54-AS1-202ENST00000555015 KCNA6P17658 529 aa18.73■□□□□ 0.59
SRP54-AS1-202ENST00000555015 STAC3Q96MF2 364 aa18.72■□□□□ 0.59
SRP54-AS1-202ENST00000555015 LRRC7Q96NW7 1537 aa18.72■□□□□ 0.59
SRP54-AS1-202ENST00000555015 METP08581 1390 aa18.69■□□□□ 0.58
SRP54-AS1-202ENST00000555015 PTPRUQ92729 1446 aa18.69■□□□□ 0.58
SRP54-AS1-202ENST00000555015 DCAF11Q8TEB1 546 aa18.69■□□□□ 0.58
SRP54-AS1-202ENST00000555015 SIN3AQ96ST3 1273 aa18.69■□□□□ 0.58
SRP54-AS1-202ENST00000555015 KNDC1Q76NI1 1749 aa18.68■□□□□ 0.58
SRP54-AS1-202ENST00000555015 KIAA1210Q9ULL0 1709 aa18.68■□□□□ 0.58
SRP54-AS1-202ENST00000555015 ASXL1Q8IXJ9 1541 aa18.68■□□□□ 0.58
SRP54-AS1-202ENST00000555015 PRAG1Q86YV5 1406 aa18.67■□□□□ 0.58
SRP54-AS1-202ENST00000555015 NEUROD1Q13562 356 aa18.65■□□□□ 0.58
SRP54-AS1-202ENST00000555015 CLSPNQ9HAW4 1339 aa18.65■□□□□ 0.58
SRP54-AS1-202ENST00000555015 AMOTL2Q9Y2J4 779 aa18.64■□□□□ 0.57
SRP54-AS1-202ENST00000555015 KDM2AQ9Y2K7 1162 aa18.64■□□□□ 0.57
SRP54-AS1-202ENST00000555015 PTCH1Q13635 1447 aa18.64■□□□□ 0.57
SRP54-AS1-202ENST00000555015 C14orf93Q9H972 538 aaKnown RBP18.63■□□□□ 0.57
SRP54-AS1-202ENST00000555015 TMEM94Q12767 1356 aa18.63■□□□□ 0.57
SRP54-AS1-202ENST00000555015 NCOA3Q9Y6Q9 1424 aa18.62■□□□□ 0.57
SRP54-AS1-202ENST00000555015 ADGRB1O14514 1584 aa18.62■□□□□ 0.57
SRP54-AS1-202ENST00000555015 TECPR2O15040 1411 aa18.61■□□□□ 0.57
SRP54-AS1-202ENST00000555015 PROSER2Q86WR7 435 aaPredicted RBP18.61■□□□□ 0.57
SRP54-AS1-202ENST00000555015 L3MBTL2Q969R5 705 aa18.61■□□□□ 0.57
SRP54-AS1-202ENST00000555015 TONSLQ96HA7 1378 aa18.6■□□□□ 0.57
SRP54-AS1-202ENST00000555015 YTHDC2Q9H6S0 1430 aaKnown RBP18.59■□□□□ 0.57
SRP54-AS1-202ENST00000555015 LRPPRCP42704 1394 aaKnown RBP18.59■□□□□ 0.57
SRP54-AS1-202ENST00000555015 CFAP70Q5T0N1 1121 aa18.59■□□□□ 0.57
SRP54-AS1-202ENST00000555015 NALCNQ8IZF0 1738 aa18.58■□□□□ 0.57
SRP54-AS1-202ENST00000555015 TRPM1Q7Z4N2 1603 aa18.58■□□□□ 0.56
SRP54-AS1-202ENST00000555015 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.57■□□□□ 0.56
SRP54-AS1-202ENST00000555015 MED1Q15648 1581 aaPredicted RBP18.57■□□□□ 0.56
SRP54-AS1-202ENST00000555015 ABCC11Q96J66 1382 aa18.56■□□□□ 0.56
SRP54-AS1-202ENST00000555015 UBAP1LF5GYI3 381 aa18.56■□□□□ 0.56
SRP54-AS1-202ENST00000555015 TMEM132EQ6IEE7 984 aa18.56■□□□□ 0.56
SRP54-AS1-202ENST00000555015 MSH6P52701 1360 aa18.55■□□□□ 0.56
SRP54-AS1-202ENST00000555015 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
SRP54-AS1-202ENST00000555015 DLC1Q96QB1 1528 aa18.55■□□□□ 0.56
SRP54-AS1-202ENST00000555015 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
SRP54-AS1-202ENST00000555015 SOCS7O14512 581 aa18.54■□□□□ 0.56
SRP54-AS1-202ENST00000555015 ARHGEF28Q8N1W1 1705 aaKnown RBP18.54■□□□□ 0.56
SRP54-AS1-202ENST00000555015 RBM33Q96EV2 1170 aaKnown RBP18.53■□□□□ 0.56
SRP54-AS1-202ENST00000555015 ADGRL3Q9HAR2 1447 aa18.53■□□□□ 0.56
SRP54-AS1-202ENST00000555015 DCCP43146 1447 aa18.52■□□□□ 0.56
SRP54-AS1-202ENST00000555015 FAM135BQ49AJ0 1406 aa18.52■□□□□ 0.56
SRP54-AS1-202ENST00000555015 TOM1O60784 492 aa18.51■□□□□ 0.55
SRP54-AS1-202ENST00000555015 C14orf37Q86TY3 774 aa18.51■□□□□ 0.55
SRP54-AS1-202ENST00000555015 STK26Q9P289 416 aa18.51■□□□□ 0.55
SRP54-AS1-202ENST00000555015 SIRT1Q96EB6 747 aa18.49■□□□□ 0.55
SRP54-AS1-202ENST00000555015 C19orf44Q9H6X5 657 aa18.49■□□□□ 0.55
SRP54-AS1-202ENST00000555015 CDC42BPGQ6DT37 1551 aa18.49■□□□□ 0.55
SRP54-AS1-202ENST00000555015 TIMELESSQ9UNS1 1208 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms