RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 SLC52A1Q9NWF4 448 aa18.44■□□□□ 0.54
SIX1-203ENST00000554986 A2ML1A8K2U0 1454 aa18.43■□□□□ 0.54
SIX1-203ENST00000554986 MYO5BQ9ULV0 1848 aa18.42■□□□□ 0.54
SIX1-203ENST00000554986 UBR1Q8IWV7 1749 aa18.42■□□□□ 0.54
SIX1-203ENST00000554986 CCDC144AA2RUR9 1427 aa18.42■□□□□ 0.54
SIX1-203ENST00000554986 ERICH6BQ5W0A0 696 aa18.42■□□□□ 0.54
SIX1-203ENST00000554986 LMTK3Q96Q04 1460 aa18.42■□□□□ 0.54
SIX1-203ENST00000554986 DDX10Q13206 875 aaKnown RBP18.41■□□□□ 0.54
SIX1-203ENST00000554986 TMEM131LA2VDJ0 1609 aa18.41■□□□□ 0.54
SIX1-203ENST00000554986 KIF1BO60333 1816 aa18.4■□□□□ 0.54
SIX1-203ENST00000554986 ADGRB3O60242 1522 aa18.4■□□□□ 0.54
SIX1-203ENST00000554986 KDM5AP29375 1690 aaKnown RBP18.38■□□□□ 0.53
SIX1-203ENST00000554986 ANP32CO43423 234 aa18.37■□□□□ 0.53
SIX1-203ENST00000554986 CHGAP10645 457 aaKnown RBP18.37■□□□□ 0.53
SIX1-203ENST00000554986 SIN3AQ96ST3 1273 aa18.37■□□□□ 0.53
SIX1-203ENST00000554986 STAG3Q9UJ98 1225 aa18.35■□□□□ 0.53
SIX1-203ENST00000554986 HSPA2P54652 639 aa18.35■□□□□ 0.53
SIX1-203ENST00000554986 SPATA31E1Q6ZUB1 1445 aa18.35■□□□□ 0.53
SIX1-203ENST00000554986 ERICH6Q7L0X2 663 aa18.34■□□□□ 0.53
SIX1-203ENST00000554986 THEMISQ8N1K5 641 aaPredicted RBP18.32■□□□□ 0.52
SIX1-203ENST00000554986 RGL3Q3MIN7 710 aa18.3■□□□□ 0.52
SIX1-203ENST00000554986 NEURL4Q96JN8 1562 aa18.3■□□□□ 0.52
SIX1-203ENST00000554986 TMEM2Q9UHN6 1383 aa18.3■□□□□ 0.52
SIX1-203ENST00000554986 ARHGAP23Q9P227 1491 aa18.3■□□□□ 0.52
SIX1-203ENST00000554986 SLIT1O75093 1534 aa18.3■□□□□ 0.52
SIX1-203ENST00000554986 ZNF326Q5BKZ1 582 aaKnown RBP18.28■□□□□ 0.52
SIX1-203ENST00000554986 ZFYVE9O95405 1425 aa18.28■□□□□ 0.52
SIX1-203ENST00000554986 NEXMIFQ5QGS0 1516 aa18.28■□□□□ 0.52
SIX1-203ENST00000554986 PPLO60437 1756 aa18.27■□□□□ 0.52
SIX1-203ENST00000554986 IFT172Q9UG01 1749 aa18.27■□□□□ 0.52
SIX1-203ENST00000554986 RIMS2Q9UQ26 1411 aa18.27■□□□□ 0.52
SIX1-203ENST00000554986 LTKP29376 864 aa18.26■□□□□ 0.51
SIX1-203ENST00000554986 NUTM2DQ5VT03 806 aaPredicted RBP18.26■□□□□ 0.51
SIX1-203ENST00000554986 STRCQ7RTU9 1775 aa18.26■□□□□ 0.51
SIX1-203ENST00000554986 POLR1AO95602 1720 aaPredicted RBP18.25■□□□□ 0.51
SIX1-203ENST00000554986 NCKAP5LQ9HCH0 1330 aa18.23■□□□□ 0.51
SIX1-203ENST00000554986 SCAF11Q99590 1463 aaKnown RBP18.23■□□□□ 0.51
SIX1-203ENST00000554986 TXNDC2Q86VQ3 553 aa18.23■□□□□ 0.51
SIX1-203ENST00000554986 PRKCSHP14314 528 aaPredicted RBP18.22■□□□□ 0.51
SIX1-203ENST00000554986 RPGRIP1LQ68CZ1 1315 aa18.22■□□□□ 0.51
SIX1-203ENST00000554986 ANKLE2Q86XL3 938 aa18.22■□□□□ 0.51
SIX1-203ENST00000554986 L3MBTL2Q969R5 705 aa18.21■□□□□ 0.5
SIX1-203ENST00000554986 EID1Q9Y6B2 187 aa18.21■□□□□ 0.5
SIX1-203ENST00000554986 PPP4R2Q9NY27 417 aa18.2■□□□□ 0.5
SIX1-203ENST00000554986 DEKP35659 375 aaKnown RBP18.19■□□□□ 0.5
SIX1-203ENST00000554986 DCAF11Q8TEB1 546 aa18.19■□□□□ 0.5
SIX1-203ENST00000554986 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.19■□□□□ 0.5
SIX1-203ENST00000554986 ADGRF5Q8IZF2 1346 aa18.18■□□□□ 0.5
SIX1-203ENST00000554986 KDM2AQ9Y2K7 1162 aa18.18■□□□□ 0.5
SIX1-203ENST00000554986 TONSLQ96HA7 1378 aa18.17■□□□□ 0.5
SIX1-203ENST00000554986 MED14O60244 1454 aa18.17■□□□□ 0.5
SIX1-203ENST00000554986 MYOM2P54296 1465 aa18.17■□□□□ 0.5
SIX1-203ENST00000554986 HDGFP51858 240 aaKnown RBP18.17■□□□□ 0.5
SIX1-203ENST00000554986 NRXN3Q9Y4C0 1643 aa18.16■□□□□ 0.5
SIX1-203ENST00000554986 IQGAP1P46940 1657 aa18.16■□□□□ 0.5
SIX1-203ENST00000554986 NPHP4O75161 1426 aaPredicted RBP18.16■□□□□ 0.5
SIX1-203ENST00000554986 VGFO15240 615 aaPredicted RBP18.16■□□□□ 0.5
SIX1-203ENST00000554986 PLEKHG1Q9ULL1 1385 aa18.16■□□□□ 0.5
SIX1-203ENST00000554986 NRXN1Q9ULB1 1477 aa18.15■□□□□ 0.5
SIX1-203ENST00000554986 SETBP1Q9Y6X0 1596 aa18.13■□□□□ 0.49
SIX1-203ENST00000554986 PIK3C2GO75747 1445 aa18.13■□□□□ 0.49
SIX1-203ENST00000554986 ADAMTS13Q76LX8 1427 aa18.12■□□□□ 0.49
SIX1-203ENST00000554986 SETD1AO15047 1707 aaKnown RBP18.1■□□□□ 0.49
SIX1-203ENST00000554986 HNRNPUQ00839 825 aaKnown RBP eCLIP18.1■□□□□ 0.49
SIX1-203ENST00000554986 SLC26A8Q96RN1 970 aa18.1■□□□□ 0.49
SIX1-203ENST00000554986 PRAG1Q86YV5 1406 aa18.1■□□□□ 0.49
SIX1-203ENST00000554986 STAC3Q96MF2 364 aa18.09■□□□□ 0.49
SIX1-203ENST00000554986 ALKQ9UM73 1620 aa18.09■□□□□ 0.49
SIX1-203ENST00000554986 NBPF8Q3BBV2 869 aa18.07■□□□□ 0.48
SIX1-203ENST00000554986 NOP58Q9Y2X3 529 aaKnown RBP18.07■□□□□ 0.48
SIX1-203ENST00000554986 CFAP70Q5T0N1 1121 aa18.06■□□□□ 0.48
SIX1-203ENST00000554986 DIP2AQ14689 1571 aa18.06■□□□□ 0.48
SIX1-203ENST00000554986 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
SIX1-203ENST00000554986 C14orf93Q9H972 538 aaKnown RBP18.04■□□□□ 0.48
SIX1-203ENST00000554986 TBX22Q9Y458 520 aa18.04■□□□□ 0.48
SIX1-203ENST00000554986 ASXL1Q8IXJ9 1541 aa18.04■□□□□ 0.48
SIX1-203ENST00000554986 METP08581 1390 aa18.04■□□□□ 0.48
SIX1-203ENST00000554986 LAMC1P11047 1609 aa18.04■□□□□ 0.48
SIX1-203ENST00000554986 TRPM1Q7Z4N2 1603 aa18.03■□□□□ 0.48
SIX1-203ENST00000554986 KIAA1210Q9ULL0 1709 aa18.03■□□□□ 0.48
SIX1-203ENST00000554986 HIRIP3Q9BW71 556 aaPredicted RBP18.02■□□□□ 0.47
SIX1-203ENST00000554986 TMEM132EQ6IEE7 984 aa18.01■□□□□ 0.47
SIX1-203ENST00000554986 STRCP1A6NGW2 1772 aa18.01■□□□□ 0.47
SIX1-203ENST00000554986 PTPRUQ92729 1446 aa18.01■□□□□ 0.47
SIX1-203ENST00000554986 CHD2O14647 1828 aaKnown RBP18.01■□□□□ 0.47
SIX1-203ENST00000554986 ADGRB1O14514 1584 aa18.01■□□□□ 0.47
SIX1-203ENST00000554986 NBPF1Q3BBV0 1214 aa18■□□□□ 0.47
SIX1-203ENST00000554986 IRX6P78412 446 aaPredicted RBP17.99■□□□□ 0.47
SIX1-203ENST00000554986 ZNF335Q9H4Z2 1342 aaPredicted RBP17.99■□□□□ 0.47
SIX1-203ENST00000554986 ZBED9Q6R2W3 1325 aa17.98■□□□□ 0.47
SIX1-203ENST00000554986 PIK3R4Q99570 1358 aa17.97■□□□□ 0.47
SIX1-203ENST00000554986 XRN1Q8IZH2 1706 aaKnown RBP17.97■□□□□ 0.47
SIX1-203ENST00000554986 RALGAPBQ86X10 1494 aa17.97■□□□□ 0.47
SIX1-203ENST00000554986 NWD1Q149M9 1564 aa17.97■□□□□ 0.47
SIX1-203ENST00000554986 AMOTL2Q9Y2J4 779 aa17.95■□□□□ 0.46
SIX1-203ENST00000554986 YTHDC2Q9H6S0 1430 aaKnown RBP17.95■□□□□ 0.46
SIX1-203ENST00000554986 KCNA6P17658 529 aa17.94■□□□□ 0.46
SIX1-203ENST00000554986 ROCK2O75116 1388 aaKnown RBP17.93■□□□□ 0.46
SIX1-203ENST00000554986 LRPPRCP42704 1394 aaKnown RBP17.93■□□□□ 0.46
SIX1-203ENST00000554986 STK26Q9P289 416 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms