RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 ZNF772Q68DY9 489 aaPredicted RBP20.74■□□□□ 0.91
TUBB3-207ENST00000554927 CROCC2H7BZ55 1655 aa20.73■□□□□ 0.91
TUBB3-207ENST00000554927 LMTK2Q8IWU2 1503 aa20.73■□□□□ 0.91
TUBB3-207ENST00000554927 DAPK1P53355 1430 aa20.73■□□□□ 0.91
TUBB3-207ENST00000554927 LOC105371045A0A1W2PR82 267 aa20.73■□□□□ 0.91
TUBB3-207ENST00000554927 UPF1Q92900 1129 aaKnown RBP eCLIP20.73■□□□□ 0.91
TUBB3-207ENST00000554927 SLC52A1Q9NWF4 448 aa20.73■□□□□ 0.91
TUBB3-207ENST00000554927 SPATA31A6Q5VVP1 1343 aa20.73■□□□□ 0.91
TUBB3-207ENST00000554927 ANKRD30AQ9BXX3 1397 aa20.72■□□□□ 0.91
TUBB3-207ENST00000554927 NOS1P29475 1434 aa20.71■□□□□ 0.91
TUBB3-207ENST00000554927 PTPN23Q9H3S7 1636 aa20.71■□□□□ 0.91
TUBB3-207ENST00000554927 HDGFP51858 240 aaKnown RBP20.7■□□□□ 0.9
TUBB3-207ENST00000554927 LRP6O75581 1613 aa20.7■□□□□ 0.9
TUBB3-207ENST00000554927 COL16A1Q07092 1604 aaPredicted RBP20.69■□□□□ 0.9
TUBB3-207ENST00000554927 PLEKHG1Q9ULL1 1385 aa20.69■□□□□ 0.9
TUBB3-207ENST00000554927 FGD6Q6ZV73 1430 aa20.68■□□□□ 0.9
TUBB3-207ENST00000554927 ATF3P18847 181 aa20.67■□□□□ 0.9
TUBB3-207ENST00000554927 RXRBP28702 533 aa20.67■□□□□ 0.9
TUBB3-207ENST00000554927 APLP2Q06481 763 aa20.67■□□□□ 0.9
TUBB3-207ENST00000554927 RIMS2Q9UQ26 1411 aa20.67■□□□□ 0.9
TUBB3-207ENST00000554927 CHGAP10645 457 aaKnown RBP20.66■□□□□ 0.9
TUBB3-207ENST00000554927 NUTM2BA6NNL0 878 aaPredicted RBP20.65■□□□□ 0.9
TUBB3-207ENST00000554927 NUTM2EB1AL46 878 aaPredicted RBP20.65■□□□□ 0.9
TUBB3-207ENST00000554927 CADPS2Q86UW7 1296 aa20.65■□□□□ 0.9
TUBB3-207ENST00000554927 NUTM2AQ8IVF1 878 aaPredicted RBP20.65■□□□□ 0.9
TUBB3-207ENST00000554927 ZFYVE9O95405 1425 aa20.64■□□□□ 0.89
TUBB3-207ENST00000554927 TBX22Q9Y458 520 aa20.64■□□□□ 0.89
TUBB3-207ENST00000554927 NCOA3Q9Y6Q9 1424 aa20.63■□□□□ 0.89
TUBB3-207ENST00000554927 C19orf44Q9H6X5 657 aa20.63■□□□□ 0.89
TUBB3-207ENST00000554927 CHD2O14647 1828 aaKnown RBP20.62■□□□□ 0.89
TUBB3-207ENST00000554927 NUTM2DQ5VT03 806 aaPredicted RBP20.62■□□□□ 0.89
TUBB3-207ENST00000554927 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
TUBB3-207ENST00000554927 RPRD2Q5VT52 1461 aaKnown RBP20.6■□□□□ 0.89
TUBB3-207ENST00000554927 AHDC1Q5TGY3 1603 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-207ENST00000554927 SHPRHQ149N8 1683 aa20.58■□□□□ 0.88
TUBB3-207ENST00000554927 GCC2Q8IWJ2 1684 aa20.58■□□□□ 0.88
TUBB3-207ENST00000554927 BRINP3Q76B58 766 aa20.57■□□□□ 0.88
TUBB3-207ENST00000554927 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.56■□□□□ 0.88
TUBB3-207ENST00000554927 AFF2P51816 1311 aa20.55■□□□□ 0.88
TUBB3-207ENST00000554927 MYO5BQ9ULV0 1848 aa20.55■□□□□ 0.88
TUBB3-207ENST00000554927 ADAMTS13Q76LX8 1427 aa20.54■□□□□ 0.88
TUBB3-207ENST00000554927 ANKRD50Q9ULJ7 1429 aa20.54■□□□□ 0.88
TUBB3-207ENST00000554927 TMEM131LA2VDJ0 1609 aa20.54■□□□□ 0.88
TUBB3-207ENST00000554927 FAM50AQ14320 339 aaKnown RBP20.54■□□□□ 0.88
TUBB3-207ENST00000554927 AMOTL2Q9Y2J4 779 aa20.54■□□□□ 0.88
TUBB3-207ENST00000554927 PIK3R4Q99570 1358 aa20.53■□□□□ 0.88
TUBB3-207ENST00000554927 CDK12Q9NYV4 1490 aaPredicted RBP20.53■□□□□ 0.88
TUBB3-207ENST00000554927 DIP2AQ14689 1571 aa20.51■□□□□ 0.87
TUBB3-207ENST00000554927 ADGRL2O95490 1459 aa20.51■□□□□ 0.87
TUBB3-207ENST00000554927 C8orf37Q96NL8 207 aa20.51■□□□□ 0.87
TUBB3-207ENST00000554927 TRPM2O94759 1503 aa20.48■□□□□ 0.87
TUBB3-207ENST00000554927 QTRT2Q9H974 415 aaKnown RBP20.48■□□□□ 0.87
TUBB3-207ENST00000554927 ASXL1Q8IXJ9 1541 aa20.48■□□□□ 0.87
TUBB3-207ENST00000554927 LRRC59Q96AG4 307 aaKnown RBP20.47■□□□□ 0.87
TUBB3-207ENST00000554927 RGS12O14924 1447 aa20.46■□□□□ 0.87
TUBB3-207ENST00000554927 PTPRUQ92729 1446 aa20.46■□□□□ 0.87
TUBB3-207ENST00000554927 RBM6P78332 1123 aaKnown RBP20.46■□□□□ 0.87
TUBB3-207ENST00000554927 DCCP43146 1447 aa20.45■□□□□ 0.86
TUBB3-207ENST00000554927 SETD5Q9C0A6 1442 aa20.45■□□□□ 0.86
TUBB3-207ENST00000554927 DDX17Q92841 729 aaKnown RBP20.43■□□□□ 0.86
TUBB3-207ENST00000554927 NGLY1Q96IV0 654 aa20.42■□□□□ 0.86
TUBB3-207ENST00000554927 MST1RQ04912 1400 aa20.42■□□□□ 0.86
TUBB3-207ENST00000554927 ADAMTS2O95450 1211 aa20.41■□□□□ 0.86
TUBB3-207ENST00000554927 PNPLA6Q8IY17 1366 aa20.4■□□□□ 0.86
TUBB3-207ENST00000554927 E9PCH4 1651 aa20.39■□□□□ 0.86
TUBB3-207ENST00000554927 UNC13BO14795 1591 aa20.39■□□□□ 0.85
TUBB3-207ENST00000554927 ZNF326Q5BKZ1 582 aaKnown RBP20.38■□□□□ 0.85
TUBB3-207ENST00000554927 NHSL1Q5SYE7 1610 aa20.38■□□□□ 0.85
TUBB3-207ENST00000554927 ATAD2Q6PL18 1390 aa20.37■□□□□ 0.85
TUBB3-207ENST00000554927 FOXD1Q16676 465 aa20.36■□□□□ 0.85
TUBB3-207ENST00000554927 NUP155O75694 1391 aa20.34■□□□□ 0.85
TUBB3-207ENST00000554927 METP08581 1390 aa20.34■□□□□ 0.85
TUBB3-207ENST00000554927 XRN1Q8IZH2 1706 aaKnown RBP20.34■□□□□ 0.85
TUBB3-207ENST00000554927 ZRANB1Q9UGI0 708 aa20.33■□□□□ 0.85
TUBB3-207ENST00000554927 USP21Q9UK80 565 aa20.33■□□□□ 0.85
TUBB3-207ENST00000554927 ADGRL3Q9HAR2 1447 aa20.33■□□□□ 0.84
TUBB3-207ENST00000554927 SETBP1Q9Y6X0 1596 aa20.31■□□□□ 0.84
TUBB3-207ENST00000554927 TRPC5Q9UL62 973 aaPredicted RBP20.31■□□□□ 0.84
TUBB3-207ENST00000554927 IQGAP3Q86VI3 1631 aa20.31■□□□□ 0.84
TUBB3-207ENST00000554927 SRCAPQ6ZRS2 3230 aa20.31■□□□□ 0.84
TUBB3-207ENST00000554927 NRXN3Q9Y4C0 1643 aa20.3■□□□□ 0.84
TUBB3-207ENST00000554927 C1orf167Q5SNV9 1468 aa20.27■□□□□ 0.84
TUBB3-207ENST00000554927 ROCK1Q13464 1354 aa20.26■□□□□ 0.83
TUBB3-207ENST00000554927 ITGAEP38570 1179 aa20.26■□□□□ 0.83
TUBB3-207ENST00000554927 ORAI2Q96SN7 254 aa20.25■□□□□ 0.83
TUBB3-207ENST00000554927 NALCNQ8IZF0 1738 aa20.24■□□□□ 0.83
TUBB3-207ENST00000554927 PTCH1Q13635 1447 aa20.23■□□□□ 0.83
TUBB3-207ENST00000554927 FNBP4Q8N3X1 1017 aaPredicted RBP20.23■□□□□ 0.83
TUBB3-207ENST00000554927 SOS2Q07890 1332 aaPredicted RBP20.23■□□□□ 0.83
TUBB3-207ENST00000554927 ATRNO75882 1429 aa20.21■□□□□ 0.83
TUBB3-207ENST00000554927 CCDC125Q86Z20 511 aa20.2■□□□□ 0.82
TUBB3-207ENST00000554927 SPHKAPQ2M3C7 1700 aa20.19■□□□□ 0.82
TUBB3-207ENST00000554927 ROBO2Q9HCK4 1378 aa20.17■□□□□ 0.82
TUBB3-207ENST00000554927 NEXMIFQ5QGS0 1516 aa20.17■□□□□ 0.82
TUBB3-207ENST00000554927 LAMC1P11047 1609 aa20.16■□□□□ 0.82
TUBB3-207ENST00000554927 ESCO1Q5FWF5 840 aa20.15■□□□□ 0.82
TUBB3-207ENST00000554927 NPHP3Q7Z494 1330 aa20.13■□□□□ 0.81
TUBB3-207ENST00000554927 VGFO15240 615 aaPredicted RBP20.13■□□□□ 0.81
TUBB3-207ENST00000554927 XPCQ01831 940 aaPredicted RBP20.13■□□□□ 0.81
TUBB3-207ENST00000554927 GJD4Q96KN9 370 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms