RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 ZNF772Q68DY9 489 aaPredicted RBP20.74■□□□□ 0.91
TUBB3-207ENST00000554927 CROCC2H7BZ55 1655 aa20.73■□□□□ 0.91
TUBB3-207ENST00000554927 LMTK2Q8IWU2 1503 aa20.73■□□□□ 0.91
TUBB3-207ENST00000554927 DAPK1P53355 1430 aa20.73■□□□□ 0.91
TUBB3-207ENST00000554927 LOC105371045A0A1W2PR82 267 aa20.73■□□□□ 0.91
TUBB3-207ENST00000554927 UPF1Q92900 1129 aaKnown RBP eCLIP20.73■□□□□ 0.91
TUBB3-207ENST00000554927 SLC52A1Q9NWF4 448 aa20.73■□□□□ 0.91
TUBB3-207ENST00000554927 SPATA31A6Q5VVP1 1343 aa20.73■□□□□ 0.91
TUBB3-207ENST00000554927 ANKRD30AQ9BXX3 1397 aa20.72■□□□□ 0.91
TUBB3-207ENST00000554927 NOS1P29475 1434 aa20.71■□□□□ 0.91
TUBB3-207ENST00000554927 PTPN23Q9H3S7 1636 aa20.71■□□□□ 0.91
TUBB3-207ENST00000554927 HDGFP51858 240 aaKnown RBP20.7■□□□□ 0.9
TUBB3-207ENST00000554927 LRP6O75581 1613 aa20.7■□□□□ 0.9
TUBB3-207ENST00000554927 COL16A1Q07092 1604 aaPredicted RBP20.69■□□□□ 0.9
TUBB3-207ENST00000554927 PLEKHG1Q9ULL1 1385 aa20.69■□□□□ 0.9
TUBB3-207ENST00000554927 FGD6Q6ZV73 1430 aa20.68■□□□□ 0.9
TUBB3-207ENST00000554927 ATF3P18847 181 aa20.67■□□□□ 0.9
TUBB3-207ENST00000554927 RXRBP28702 533 aa20.67■□□□□ 0.9
TUBB3-207ENST00000554927 APLP2Q06481 763 aa20.67■□□□□ 0.9
TUBB3-207ENST00000554927 RIMS2Q9UQ26 1411 aa20.67■□□□□ 0.9
TUBB3-207ENST00000554927 CHGAP10645 457 aaKnown RBP20.66■□□□□ 0.9
TUBB3-207ENST00000554927 NUTM2BA6NNL0 878 aaPredicted RBP20.65■□□□□ 0.9
TUBB3-207ENST00000554927 NUTM2EB1AL46 878 aaPredicted RBP20.65■□□□□ 0.9
TUBB3-207ENST00000554927 CADPS2Q86UW7 1296 aa20.65■□□□□ 0.9
TUBB3-207ENST00000554927 NUTM2AQ8IVF1 878 aaPredicted RBP20.65■□□□□ 0.9
TUBB3-207ENST00000554927 ZFYVE9O95405 1425 aa20.64■□□□□ 0.89
TUBB3-207ENST00000554927 TBX22Q9Y458 520 aa20.64■□□□□ 0.89
TUBB3-207ENST00000554927 NCOA3Q9Y6Q9 1424 aa20.63■□□□□ 0.89
TUBB3-207ENST00000554927 C19orf44Q9H6X5 657 aa20.63■□□□□ 0.89
TUBB3-207ENST00000554927 CHD2O14647 1828 aaKnown RBP20.62■□□□□ 0.89
TUBB3-207ENST00000554927 NUTM2DQ5VT03 806 aaPredicted RBP20.62■□□□□ 0.89
TUBB3-207ENST00000554927 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
TUBB3-207ENST00000554927 RPRD2Q5VT52 1461 aaKnown RBP20.6■□□□□ 0.89
TUBB3-207ENST00000554927 AHDC1Q5TGY3 1603 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-207ENST00000554927 SHPRHQ149N8 1683 aa20.58■□□□□ 0.88
TUBB3-207ENST00000554927 GCC2Q8IWJ2 1684 aa20.58■□□□□ 0.88
TUBB3-207ENST00000554927 BRINP3Q76B58 766 aa20.57■□□□□ 0.88
TUBB3-207ENST00000554927 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.56■□□□□ 0.88
TUBB3-207ENST00000554927 AFF2P51816 1311 aa20.55■□□□□ 0.88
TUBB3-207ENST00000554927 MYO5BQ9ULV0 1848 aa20.55■□□□□ 0.88
TUBB3-207ENST00000554927 ADAMTS13Q76LX8 1427 aa20.54■□□□□ 0.88
TUBB3-207ENST00000554927 ANKRD50Q9ULJ7 1429 aa20.54■□□□□ 0.88
TUBB3-207ENST00000554927 TMEM131LA2VDJ0 1609 aa20.54■□□□□ 0.88
TUBB3-207ENST00000554927 FAM50AQ14320 339 aaKnown RBP20.54■□□□□ 0.88
TUBB3-207ENST00000554927 AMOTL2Q9Y2J4 779 aa20.54■□□□□ 0.88
TUBB3-207ENST00000554927 PIK3R4Q99570 1358 aa20.53■□□□□ 0.88
TUBB3-207ENST00000554927 CDK12Q9NYV4 1490 aaPredicted RBP20.53■□□□□ 0.88
TUBB3-207ENST00000554927 DIP2AQ14689 1571 aa20.51■□□□□ 0.87
TUBB3-207ENST00000554927 ADGRL2O95490 1459 aa20.51■□□□□ 0.87
TUBB3-207ENST00000554927 C8orf37Q96NL8 207 aa20.51■□□□□ 0.87
TUBB3-207ENST00000554927 TRPM2O94759 1503 aa20.48■□□□□ 0.87
TUBB3-207ENST00000554927 QTRT2Q9H974 415 aaKnown RBP20.48■□□□□ 0.87
TUBB3-207ENST00000554927 ASXL1Q8IXJ9 1541 aa20.48■□□□□ 0.87
TUBB3-207ENST00000554927 LRRC59Q96AG4 307 aaKnown RBP20.47■□□□□ 0.87
TUBB3-207ENST00000554927 RGS12O14924 1447 aa20.46■□□□□ 0.87
TUBB3-207ENST00000554927 PTPRUQ92729 1446 aa20.46■□□□□ 0.87
TUBB3-207ENST00000554927 RBM6P78332 1123 aaKnown RBP20.46■□□□□ 0.87
TUBB3-207ENST00000554927 DCCP43146 1447 aa20.45■□□□□ 0.86
TUBB3-207ENST00000554927 SETD5Q9C0A6 1442 aa20.45■□□□□ 0.86
TUBB3-207ENST00000554927 DDX17Q92841 729 aaKnown RBP20.43■□□□□ 0.86
TUBB3-207ENST00000554927 NGLY1Q96IV0 654 aa20.42■□□□□ 0.86
TUBB3-207ENST00000554927 MST1RQ04912 1400 aa20.42■□□□□ 0.86
TUBB3-207ENST00000554927 ADAMTS2O95450 1211 aa20.41■□□□□ 0.86
TUBB3-207ENST00000554927 PNPLA6Q8IY17 1366 aa20.4■□□□□ 0.86
TUBB3-207ENST00000554927 E9PCH4 1651 aa20.39■□□□□ 0.86
TUBB3-207ENST00000554927 UNC13BO14795 1591 aa20.39■□□□□ 0.85
TUBB3-207ENST00000554927 ZNF326Q5BKZ1 582 aaKnown RBP20.38■□□□□ 0.85
TUBB3-207ENST00000554927 NHSL1Q5SYE7 1610 aa20.38■□□□□ 0.85
TUBB3-207ENST00000554927 ATAD2Q6PL18 1390 aa20.37■□□□□ 0.85
TUBB3-207ENST00000554927 FOXD1Q16676 465 aa20.36■□□□□ 0.85
TUBB3-207ENST00000554927 NUP155O75694 1391 aa20.34■□□□□ 0.85
TUBB3-207ENST00000554927 METP08581 1390 aa20.34■□□□□ 0.85
TUBB3-207ENST00000554927 XRN1Q8IZH2 1706 aaKnown RBP20.34■□□□□ 0.85
TUBB3-207ENST00000554927 ZRANB1Q9UGI0 708 aa20.33■□□□□ 0.85
TUBB3-207ENST00000554927 USP21Q9UK80 565 aa20.33■□□□□ 0.85
TUBB3-207ENST00000554927 ADGRL3Q9HAR2 1447 aa20.33■□□□□ 0.84
TUBB3-207ENST00000554927 SETBP1Q9Y6X0 1596 aa20.31■□□□□ 0.84
TUBB3-207ENST00000554927 TRPC5Q9UL62 973 aaPredicted RBP20.31■□□□□ 0.84
TUBB3-207ENST00000554927 IQGAP3Q86VI3 1631 aa20.31■□□□□ 0.84
TUBB3-207ENST00000554927 SRCAPQ6ZRS2 3230 aa20.31■□□□□ 0.84
TUBB3-207ENST00000554927 NRXN3Q9Y4C0 1643 aa20.3■□□□□ 0.84
TUBB3-207ENST00000554927 C1orf167Q5SNV9 1468 aa20.27■□□□□ 0.84
TUBB3-207ENST00000554927 ROCK1Q13464 1354 aa20.26■□□□□ 0.83
TUBB3-207ENST00000554927 ITGAEP38570 1179 aa20.26■□□□□ 0.83
TUBB3-207ENST00000554927 ORAI2Q96SN7 254 aa20.25■□□□□ 0.83
TUBB3-207ENST00000554927 NALCNQ8IZF0 1738 aa20.24■□□□□ 0.83
TUBB3-207ENST00000554927 PTCH1Q13635 1447 aa20.23■□□□□ 0.83
TUBB3-207ENST00000554927 FNBP4Q8N3X1 1017 aaPredicted RBP20.23■□□□□ 0.83
TUBB3-207ENST00000554927 SOS2Q07890 1332 aaPredicted RBP20.23■□□□□ 0.83
TUBB3-207ENST00000554927 ATRNO75882 1429 aa20.21■□□□□ 0.83
TUBB3-207ENST00000554927 CCDC125Q86Z20 511 aa20.2■□□□□ 0.82
TUBB3-207ENST00000554927 SPHKAPQ2M3C7 1700 aa20.19■□□□□ 0.82
TUBB3-207ENST00000554927 ROBO2Q9HCK4 1378 aa20.17■□□□□ 0.82
TUBB3-207ENST00000554927 NEXMIFQ5QGS0 1516 aa20.17■□□□□ 0.82
TUBB3-207ENST00000554927 LAMC1P11047 1609 aa20.16■□□□□ 0.82
TUBB3-207ENST00000554927 ESCO1Q5FWF5 840 aa20.15■□□□□ 0.82
TUBB3-207ENST00000554927 NPHP3Q7Z494 1330 aa20.13■□□□□ 0.81
TUBB3-207ENST00000554927 VGFO15240 615 aaPredicted RBP20.13■□□□□ 0.81
TUBB3-207ENST00000554927 XPCQ01831 940 aaPredicted RBP20.13■□□□□ 0.81
TUBB3-207ENST00000554927 GJD4Q96KN9 370 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms