RNA–Protein interactions for RNA: ENST00000554732.5

LINC00639-202, long intergenic non-protein coding RNA 639, humanhuman

TSL 1 (best)

Gene LINC00639, Length 4,364 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-202ENST00000554732 MCCP23508 829 aa16.97■□□□□ 0.31
LINC00639-202ENST00000554732 ST18O60284 1047 aa16.97■□□□□ 0.31
LINC00639-202ENST00000554732 RSPH4AQ5TD94 716 aa16.96■□□□□ 0.31
LINC00639-202ENST00000554732 PDZRN3Q9UPQ7 1066 aa16.96■□□□□ 0.31
LINC00639-202ENST00000554732 KCNJ4P48050 445 aa16.96■□□□□ 0.31
LINC00639-202ENST00000554732 BBXQ8WY36 941 aaPredicted RBP16.95■□□□□ 0.3
LINC00639-202ENST00000554732 LRRC9Q6ZRR7 1453 aa16.94■□□□□ 0.3
LINC00639-202ENST00000554732 PHF14O94880 888 aa16.94■□□□□ 0.3
LINC00639-202ENST00000554732 CCDC39Q9UFE4 941 aa16.94■□□□□ 0.3
LINC00639-202ENST00000554732 MLECQ14165 292 aa16.94■□□□□ 0.3
LINC00639-202ENST00000554732 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
LINC00639-202ENST00000554732 ZNF644Q9H582 1327 aaPredicted RBP16.93■□□□□ 0.3
LINC00639-202ENST00000554732 KIF3BO15066 747 aa16.93■□□□□ 0.3
LINC00639-202ENST00000554732 PRPF40AO75400 957 aaKnown RBP16.93■□□□□ 0.3
LINC00639-202ENST00000554732 UACAQ9BZF9 1416 aa16.93■□□□□ 0.3
LINC00639-202ENST00000554732 CASKIN1Q8WXD9 1431 aa16.92■□□□□ 0.3
LINC00639-202ENST00000554732 BRD4O60885 1362 aaPredicted RBP16.92■□□□□ 0.3
LINC00639-202ENST00000554732 TBC1D2Q9BYX2 928 aa16.92■□□□□ 0.3
LINC00639-202ENST00000554732 SPAG9O60271 1321 aaKnown RBP16.92■□□□□ 0.3
LINC00639-202ENST00000554732 CHMP3Q9Y3E7 222 aa16.91■□□□□ 0.3
LINC00639-202ENST00000554732 ZKSCAN2Q63HK3 967 aa16.91■□□□□ 0.3
LINC00639-202ENST00000554732 FGD6Q6ZV73 1430 aa16.91■□□□□ 0.3
LINC00639-202ENST00000554732 ISY1Q9ULR0 285 aaKnown RBP16.91■□□□□ 0.3
LINC00639-202ENST00000554732 NAP1L2Q9ULW6 460 aaPredicted RBP16.9■□□□□ 0.3
LINC00639-202ENST00000554732 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
LINC00639-202ENST00000554732 FGD1P98174 961 aa16.89■□□□□ 0.3
LINC00639-202ENST00000554732 ELL2O00472 640 aaPredicted RBP16.89■□□□□ 0.29
LINC00639-202ENST00000554732 CGNQ9P2M7 1197 aaKnown RBP16.89■□□□□ 0.29
LINC00639-202ENST00000554732 NUCB2P80303 420 aa16.88■□□□□ 0.29
LINC00639-202ENST00000554732 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
LINC00639-202ENST00000554732 CFAP44Q96MT7 982 aa16.88■□□□□ 0.29
LINC00639-202ENST00000554732 DIAPH3Q9NSV4 1193 aa16.87■□□□□ 0.29
LINC00639-202ENST00000554732 HMGN5P82970 282 aaKnown RBP16.87■□□□□ 0.29
LINC00639-202ENST00000554732 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
LINC00639-202ENST00000554732 IFT57Q9NWB7 429 aa16.87■□□□□ 0.29
LINC00639-202ENST00000554732 TRIM6-TRIM34B2RNG4 842 aa16.86■□□□□ 0.29
LINC00639-202ENST00000554732 DZIP1LQ8IYY4 767 aaKnown RBP16.86■□□□□ 0.29
LINC00639-202ENST00000554732 NPHP1O15259 732 aa16.86■□□□□ 0.29
LINC00639-202ENST00000554732 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
LINC00639-202ENST00000554732 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
LINC00639-202ENST00000554732 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.84■□□□□ 0.29
LINC00639-202ENST00000554732 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
LINC00639-202ENST00000554732 KIF16BQ96L93 1317 aa16.83■□□□□ 0.29
LINC00639-202ENST00000554732 ABCA10Q8WWZ4 1543 aa16.83■□□□□ 0.28
LINC00639-202ENST00000554732 NCOA2Q15596 1464 aa16.83■□□□□ 0.28
LINC00639-202ENST00000554732 CCDC66A2RUB6 948 aa16.83■□□□□ 0.28
LINC00639-202ENST00000554732 SPDYE4A6NLX3 237 aa16.83■□□□□ 0.28
LINC00639-202ENST00000554732 ERICH4A6NGS2 130 aa16.82■□□□□ 0.28
LINC00639-202ENST00000554732 TRERF1Q96PN7 1200 aa16.82■□□□□ 0.28
LINC00639-202ENST00000554732 IGSF3O75054 1194 aa16.82■□□□□ 0.28
LINC00639-202ENST00000554732 OS9Q13438 667 aaPredicted RBP16.82■□□□□ 0.28
LINC00639-202ENST00000554732 AEBP1Q8IUX7 1158 aa16.82■□□□□ 0.28
LINC00639-202ENST00000554732 CYB5RLQ6IPT4 315 aa16.81■□□□□ 0.28
LINC00639-202ENST00000554732 FYCO1Q9BQS8 1478 aa16.81■□□□□ 0.28
LINC00639-202ENST00000554732 SPC24Q8NBT2 197 aa16.81■□□□□ 0.28
LINC00639-202ENST00000554732 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
LINC00639-202ENST00000554732 HTATSF1O43719 755 aaKnown RBP16.81■□□□□ 0.28
LINC00639-202ENST00000554732 CCAR2Q8N163 923 aaKnown RBP16.81■□□□□ 0.28
LINC00639-202ENST00000554732 PDCL2Q8N4E4 241 aa16.81■□□□□ 0.28
LINC00639-202ENST00000554732 C8orf34Q49A92 452 aa16.8■□□□□ 0.28
LINC00639-202ENST00000554732 KIF3AQ9Y496 699 aa16.8■□□□□ 0.28
LINC00639-202ENST00000554732 DDX19BQ9UMR2 479 aa16.8■□□□□ 0.28
LINC00639-202ENST00000554732 TNPO1Q92973 898 aaKnown RBP16.79■□□□□ 0.28
LINC00639-202ENST00000554732 PLCD3Q8N3E9 789 aa16.78■□□□□ 0.28
LINC00639-202ENST00000554732 APPP05067 770 aa16.78■□□□□ 0.28
LINC00639-202ENST00000554732 GNL2Q13823 731 aaKnown RBP16.78■□□□□ 0.28
LINC00639-202ENST00000554732 SASS6Q6UVJ0 657 aa16.77■□□□□ 0.28
LINC00639-202ENST00000554732 PRDM2Q13029 1718 aa16.77■□□□□ 0.28
LINC00639-202ENST00000554732 SNAPC4Q5SXM2 1469 aa16.77■□□□□ 0.28
LINC00639-202ENST00000554732 SYCE3A1L190 88 aa16.77■□□□□ 0.27
LINC00639-202ENST00000554732 C14orf37Q86TY3 774 aa16.77■□□□□ 0.27
LINC00639-202ENST00000554732 EFCAB5A4FU69 1503 aa16.77■□□□□ 0.27
LINC00639-202ENST00000554732 PDE3AQ14432 1141 aa16.76■□□□□ 0.27
LINC00639-202ENST00000554732 TSPY26PQ9H489 355 aa16.76■□□□□ 0.27
LINC00639-202ENST00000554732 PPP4R3BQ5MIZ7 849 aa16.76■□□□□ 0.27
LINC00639-202ENST00000554732 RILPL2Q969X0 211 aa16.76■□□□□ 0.27
LINC00639-202ENST00000554732 STK26Q9P289 416 aa16.75■□□□□ 0.27
LINC00639-202ENST00000554732 PRG4Q92954 1404 aaPredicted RBP16.75■□□□□ 0.27
LINC00639-202ENST00000554732 CHMP4AQ9BY43 222 aa16.75■□□□□ 0.27
LINC00639-202ENST00000554732 GOLGA6L19H0YKK7 550 aa16.75■□□□□ 0.27
LINC00639-202ENST00000554732 TEX35Q5T0J7 233 aa16.75■□□□□ 0.27
LINC00639-202ENST00000554732 K7ELQ4 463 aaPredicted RBP16.74■□□□□ 0.27
LINC00639-202ENST00000554732 SSFA2P28290 1259 aa16.74■□□□□ 0.27
LINC00639-202ENST00000554732 SEC24BO95487 1268 aa16.74■□□□□ 0.27
LINC00639-202ENST00000554732 IGHDP01880 384 aa16.74■□□□□ 0.27
LINC00639-202ENST00000554732 SLC4A10Q6U841 1118 aa16.74■□□□□ 0.27
LINC00639-202ENST00000554732 EIF3AQ14152 1382 aaKnown RBP16.74■□□□□ 0.27
LINC00639-202ENST00000554732 BECN2A8MW95 431 aa16.73■□□□□ 0.27
LINC00639-202ENST00000554732 SRPK2P78362 688 aaKnown RBP16.72■□□□□ 0.27
LINC00639-202ENST00000554732 URB2Q14146 1524 aaKnown RBP16.72■□□□□ 0.27
LINC00639-202ENST00000554732 TPD52L1Q16890 204 aaPredicted RBP16.72■□□□□ 0.27
LINC00639-202ENST00000554732 DYNC1I1O14576 645 aa16.71■□□□□ 0.27
LINC00639-202ENST00000554732 MBD3O95983 291 aa16.71■□□□□ 0.27
LINC00639-202ENST00000554732 GOLGA6L1Q8N7Z2 621 aa16.71■□□□□ 0.27
LINC00639-202ENST00000554732 CCDC144AA2RUR9 1427 aa16.71■□□□□ 0.27
LINC00639-202ENST00000554732 CIZ1Q9ULV3 898 aaPredicted RBP16.71■□□□□ 0.27
LINC00639-202ENST00000554732 REC8O95072 547 aa16.7■□□□□ 0.26
LINC00639-202ENST00000554732 PPP2R1AP30153 589 aa16.7■□□□□ 0.26
LINC00639-202ENST00000554732 HOMER1Q86YM7 354 aa16.7■□□□□ 0.26
LINC00639-202ENST00000554732 ANO2Q9NQ90 1003 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms