RNA–Protein interactions for RNA: ENST00000554683.1

CNIH1-204, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3

Gene CNIH1, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-204ENST00000554683 SLC52A1Q9NWF4 448 aa15.94■□□□□ 0.14
CNIH1-204ENST00000554683 TRIM26Q12899 539 aaPredicted RBP15.93■□□□□ 0.14
CNIH1-204ENST00000554683 MED14O60244 1454 aa15.92■□□□□ 0.14
CNIH1-204ENST00000554683 SCAF11Q99590 1463 aaKnown RBP15.92■□□□□ 0.14
CNIH1-204ENST00000554683 MPHOSPH9Q99550 1183 aa15.92■□□□□ 0.14
CNIH1-204ENST00000554683 TMEM2Q9UHN6 1383 aa15.91■□□□□ 0.14
CNIH1-204ENST00000554683 THEMISQ8N1K5 641 aaPredicted RBP15.91■□□□□ 0.14
CNIH1-204ENST00000554683 ZFYVE9O95405 1425 aa15.91■□□□□ 0.14
CNIH1-204ENST00000554683 IFT172Q9UG01 1749 aa15.88■□□□□ 0.13
CNIH1-204ENST00000554683 NCKAP5LQ9HCH0 1330 aa15.88■□□□□ 0.13
CNIH1-204ENST00000554683 NEXMIFQ5QGS0 1516 aa15.88■□□□□ 0.13
CNIH1-204ENST00000554683 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
CNIH1-204ENST00000554683 PPLO60437 1756 aa15.87■□□□□ 0.13
CNIH1-204ENST00000554683 CCDC144AA2RUR9 1427 aa15.86■□□□□ 0.13
CNIH1-204ENST00000554683 NPHP4O75161 1426 aaPredicted RBP15.86■□□□□ 0.13
CNIH1-204ENST00000554683 RIMS2Q9UQ26 1411 aa15.85■□□□□ 0.13
CNIH1-204ENST00000554683 STAG3Q9UJ98 1225 aa15.85■□□□□ 0.13
CNIH1-204ENST00000554683 NRXN3Q9Y4C0 1643 aa15.83■□□□□ 0.13
CNIH1-204ENST00000554683 LTKP29376 864 aa15.83■□□□□ 0.12
CNIH1-204ENST00000554683 ANKLE2Q86XL3 938 aa15.83■□□□□ 0.12
CNIH1-204ENST00000554683 ANKRD30BQ9BXX2 1392 aa15.83■□□□□ 0.12
CNIH1-204ENST00000554683 SPATA31E1Q6ZUB1 1445 aa15.83■□□□□ 0.12
CNIH1-204ENST00000554683 STRCP1A6NGW2 1772 aa15.81■□□□□ 0.12
CNIH1-204ENST00000554683 DIP2AQ14689 1571 aa15.81■□□□□ 0.12
CNIH1-204ENST00000554683 LTBP4Q8N2S1 1624 aa15.81■□□□□ 0.12
CNIH1-204ENST00000554683 SETBP1Q9Y6X0 1596 aa15.81■□□□□ 0.12
CNIH1-204ENST00000554683 SETD1AO15047 1707 aaKnown RBP15.8■□□□□ 0.12
CNIH1-204ENST00000554683 PLEKHG1Q9ULL1 1385 aa15.79■□□□□ 0.12
CNIH1-204ENST00000554683 CHGAP10645 457 aaKnown RBP15.79■□□□□ 0.12
CNIH1-204ENST00000554683 TXNDC2Q86VQ3 553 aa15.79■□□□□ 0.12
CNIH1-204ENST00000554683 RNF39Q9H2S5 420 aa15.78■□□□□ 0.12
CNIH1-204ENST00000554683 EID1Q9Y6B2 187 aa15.78■□□□□ 0.12
CNIH1-204ENST00000554683 NWD1Q149M9 1564 aa15.78■□□□□ 0.12
CNIH1-204ENST00000554683 DHX57Q6P158 1386 aaKnown RBP15.77■□□□□ 0.12
CNIH1-204ENST00000554683 ADAMTS13Q76LX8 1427 aa15.75■□□□□ 0.11
CNIH1-204ENST00000554683 CHD2O14647 1828 aaKnown RBP15.74■□□□□ 0.11
CNIH1-204ENST00000554683 ZBTB22O15209 634 aa15.74■□□□□ 0.11
CNIH1-204ENST00000554683 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.74■□□□□ 0.11
CNIH1-204ENST00000554683 CPS1P31327 1500 aa15.73■□□□□ 0.11
CNIH1-204ENST00000554683 MYOM2P54296 1465 aa15.73■□□□□ 0.11
CNIH1-204ENST00000554683 ZNF326Q5BKZ1 582 aaKnown RBP15.73■□□□□ 0.11
CNIH1-204ENST00000554683 U3KPZ7 1027 aaPredicted RBP15.73■□□□□ 0.11
CNIH1-204ENST00000554683 ZNF335Q9H4Z2 1342 aaPredicted RBP15.72■□□□□ 0.11
CNIH1-204ENST00000554683 PPP1R15AO75807 674 aaPredicted RBP15.72■□□□□ 0.11
CNIH1-204ENST00000554683 XRN1Q8IZH2 1706 aaKnown RBP15.71■□□□□ 0.11
CNIH1-204ENST00000554683 NUTM2DQ5VT03 806 aaPredicted RBP15.71■□□□□ 0.11
CNIH1-204ENST00000554683 NRXN1Q9ULB1 1477 aa15.71■□□□□ 0.1
CNIH1-204ENST00000554683 XIRP1Q702N8 1843 aaKnown RBP15.71■□□□□ 0.1
CNIH1-204ENST00000554683 RPGRIP1LQ68CZ1 1315 aa15.7■□□□□ 0.1
CNIH1-204ENST00000554683 LAMC1P11047 1609 aa15.7■□□□□ 0.1
CNIH1-204ENST00000554683 HDGFP51858 240 aaKnown RBP15.7■□□□□ 0.1
CNIH1-204ENST00000554683 PCGF6Q9BYE7 350 aa15.7■□□□□ 0.1
CNIH1-204ENST00000554683 MYCNP04198 464 aaPredicted RBP15.69■□□□□ 0.1
CNIH1-204ENST00000554683 NKTRP30414 1462 aaKnown RBP15.69■□□□□ 0.1
CNIH1-204ENST00000554683 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
CNIH1-204ENST00000554683 ALKQ9UM73 1620 aa15.68■□□□□ 0.1
CNIH1-204ENST00000554683 IQSEC2Q5JU85 1478 aa15.68■□□□□ 0.1
CNIH1-204ENST00000554683 ASXL1Q8IXJ9 1541 aa15.67■□□□□ 0.1
CNIH1-204ENST00000554683 SLC26A8Q96RN1 970 aa15.66■□□□□ 0.1
CNIH1-204ENST00000554683 PIK3R4Q99570 1358 aa15.65■□□□□ 0.1
CNIH1-204ENST00000554683 LRRC7Q96NW7 1537 aa15.65■□□□□ 0.1
CNIH1-204ENST00000554683 C1QBPQ07021 282 aaKnown RBP15.65■□□□□ 0.1
CNIH1-204ENST00000554683 RGL3Q3MIN7 710 aa15.65■□□□□ 0.1
CNIH1-204ENST00000554683 KNDC1Q76NI1 1749 aa15.65■□□□□ 0.1
CNIH1-204ENST00000554683 VGFO15240 615 aaPredicted RBP15.64■□□□□ 0.09
CNIH1-204ENST00000554683 ADGRF5Q8IZF2 1346 aa15.64■□□□□ 0.09
CNIH1-204ENST00000554683 PRAG1Q86YV5 1406 aa15.63■□□□□ 0.09
CNIH1-204ENST00000554683 PTPRUQ92729 1446 aa15.63■□□□□ 0.09
CNIH1-204ENST00000554683 TBX22Q9Y458 520 aa15.63■□□□□ 0.09
CNIH1-204ENST00000554683 BCANQ96GW7 911 aa15.62■□□□□ 0.09
CNIH1-204ENST00000554683 METP08581 1390 aa15.62■□□□□ 0.09
CNIH1-204ENST00000554683 CERKQ8TCT0 537 aa15.61■□□□□ 0.09
CNIH1-204ENST00000554683 KIAA1210Q9ULL0 1709 aa15.6■□□□□ 0.09
CNIH1-204ENST00000554683 KCNA6P17658 529 aa15.59■□□□□ 0.09
CNIH1-204ENST00000554683 PTCH1Q13635 1447 aa15.59■□□□□ 0.09
CNIH1-204ENST00000554683 ADGRB1O14514 1584 aa15.58■□□□□ 0.09
CNIH1-204ENST00000554683 NALCNQ8IZF0 1738 aa15.57■□□□□ 0.08
CNIH1-204ENST00000554683 SIN3AQ96ST3 1273 aa15.57■□□□□ 0.08
CNIH1-204ENST00000554683 SAMD1Q6SPF0 538 aaPredicted RBP15.56■□□□□ 0.08
CNIH1-204ENST00000554683 TRPM1Q7Z4N2 1603 aa15.55■□□□□ 0.08
CNIH1-204ENST00000554683 TECPR2O15040 1411 aa15.55■□□□□ 0.08
CNIH1-204ENST00000554683 TMEM94Q12767 1356 aa15.54■□□□□ 0.08
CNIH1-204ENST00000554683 DCAF11Q8TEB1 546 aa15.54■□□□□ 0.08
CNIH1-204ENST00000554683 STAC3Q96MF2 364 aa15.53■□□□□ 0.08
CNIH1-204ENST00000554683 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.53■□□□□ 0.08
CNIH1-204ENST00000554683 ARHGEF28Q8N1W1 1705 aaKnown RBP15.52■□□□□ 0.08
CNIH1-204ENST00000554683 YTHDC2Q9H6S0 1430 aaKnown RBP15.51■□□□□ 0.07
CNIH1-204ENST00000554683 NCOA3Q9Y6Q9 1424 aa15.51■□□□□ 0.07
CNIH1-204ENST00000554683 LRPPRCP42704 1394 aaKnown RBP15.51■□□□□ 0.07
CNIH1-204ENST00000554683 ROBO2Q9HCK4 1378 aa15.51■□□□□ 0.07
CNIH1-204ENST00000554683 CLSPNQ9HAW4 1339 aa15.51■□□□□ 0.07
CNIH1-204ENST00000554683 CACNB1Q02641 598 aaPredicted RBP15.51■□□□□ 0.07
CNIH1-204ENST00000554683 C14orf93Q9H972 538 aaKnown RBP15.51■□□□□ 0.07
CNIH1-204ENST00000554683 AMOTL2Q9Y2J4 779 aa15.51■□□□□ 0.07
CNIH1-204ENST00000554683 DLC1Q96QB1 1528 aa15.51■□□□□ 0.07
CNIH1-204ENST00000554683 NEUROD1Q13562 356 aa15.5■□□□□ 0.07
CNIH1-204ENST00000554683 L3MBTL2Q969R5 705 aa15.5■□□□□ 0.07
CNIH1-204ENST00000554683 KDM2AQ9Y2K7 1162 aa15.5■□□□□ 0.07
CNIH1-204ENST00000554683 CFAP70Q5T0N1 1121 aa15.49■□□□□ 0.07
CNIH1-204ENST00000554683 ADGRL3Q9HAR2 1447 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms