RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 POGZQ7Z3K3 1410 aa5.05□□□□□ -1.6
SEC23A-207ENST00000554615 COL3A1P02461 1466 aaPredicted RBP5.05□□□□□ -1.6
SEC23A-207ENST00000554615 STAC3Q96MF2 364 aa5.04□□□□□ -1.6
SEC23A-207ENST00000554615 WASHC2AQ641Q2 1341 aa5.04□□□□□ -1.6
SEC23A-207ENST00000554615 WASHC2CQ9Y4E1 1318 aa5.04□□□□□ -1.6
SEC23A-207ENST00000554615 PIK3C2GO75747 1445 aa5.04□□□□□ -1.6
SEC23A-207ENST00000554615 XRN1Q8IZH2 1706 aaKnown RBP5.03□□□□□ -1.6
SEC23A-207ENST00000554615 NLRP1Q9C000 1473 aa5.03□□□□□ -1.6
SEC23A-207ENST00000554615 ARHGAP5Q13017 1502 aa5.03□□□□□ -1.6
SEC23A-207ENST00000554615 ZMYM3Q14202 1370 aa5.03□□□□□ -1.6
SEC23A-207ENST00000554615 COL22A1Q8NFW1 1626 aaPredicted RBP5.02□□□□□ -1.61
SEC23A-207ENST00000554615 SIPA1L3O60292 1781 aaPredicted RBP5.02□□□□□ -1.61
SEC23A-207ENST00000554615 TULP4Q9NRJ4 1543 aa5.01□□□□□ -1.61
SEC23A-207ENST00000554615 YEATS2Q9ULM3 1422 aa5.01□□□□□ -1.61
SEC23A-207ENST00000554615 MPHOSPH9Q99550 1183 aa5.01□□□□□ -1.61
SEC23A-207ENST00000554615 DLG5Q8TDM6 1919 aa5.01□□□□□ -1.61
SEC23A-207ENST00000554615 KANK1Q14678 1352 aa5□□□□□ -1.61
SEC23A-207ENST00000554615 DNAJC5Q9H3Z4 198 aa5□□□□□ -1.61
SEC23A-207ENST00000554615 MED1Q15648 1581 aaPredicted RBP5□□□□□ -1.61
SEC23A-207ENST00000554615 ABCC6O95255 1503 aa5□□□□□ -1.61
SEC23A-207ENST00000554615 BRD4O60885 1362 aaPredicted RBP5□□□□□ -1.61
SEC23A-207ENST00000554615 LMO7Q8WWI1 1683 aa5□□□□□ -1.61
SEC23A-207ENST00000554615 SCAF11Q99590 1463 aaKnown RBP5□□□□□ -1.61
SEC23A-207ENST00000554615 PUS7Q96PZ0 661 aaKnown RBP5□□□□□ -1.61
SEC23A-207ENST00000554615 CDK12Q9NYV4 1490 aaPredicted RBP5□□□□□ -1.61
SEC23A-207ENST00000554615 TRAPPC8Q9Y2L5 1435 aa5□□□□□ -1.61
SEC23A-207ENST00000554615 PEAK1Q9H792 1746 aa4.99□□□□□ -1.61
SEC23A-207ENST00000554615 ZBED9Q6R2W3 1325 aa4.99□□□□□ -1.61
SEC23A-207ENST00000554615 CENPBP07199 599 aaPredicted RBP4.99□□□□□ -1.61
SEC23A-207ENST00000554615 NBPF8Q3BBV2 869 aa4.99□□□□□ -1.61
SEC23A-207ENST00000554615 NUP155O75694 1391 aa4.99□□□□□ -1.61
SEC23A-207ENST00000554615 KIF15Q9NS87 1388 aa4.99□□□□□ -1.61
SEC23A-207ENST00000554615 FAM135BQ49AJ0 1406 aa4.98□□□□□ -1.61
SEC23A-207ENST00000554615 FER1L4A9Z1Z3 1794 aa4.98□□□□□ -1.61
SEC23A-207ENST00000554615 PTPRMP28827 1452 aa4.98□□□□□ -1.61
SEC23A-207ENST00000554615 CD163L1Q9NR16 1453 aa4.98□□□□□ -1.61
SEC23A-207ENST00000554615 ZNF521Q96K83 1311 aa4.98□□□□□ -1.61
SEC23A-207ENST00000554615 TECPR2O15040 1411 aa4.98□□□□□ -1.61
SEC23A-207ENST00000554615 SUPT16HQ9Y5B9 1047 aaKnown RBP4.98□□□□□ -1.61
SEC23A-207ENST00000554615 ASXL2Q76L83 1435 aa4.97□□□□□ -1.61
SEC23A-207ENST00000554615 PER1O15534 1290 aaPredicted RBP4.97□□□□□ -1.61
SEC23A-207ENST00000554615 CEP170BQ9Y4F5 1589 aaPredicted RBP4.97□□□□□ -1.61
SEC23A-207ENST00000554615 KIF7Q2M1P5 1343 aa4.96□□□□□ -1.62
SEC23A-207ENST00000554615 CICQ96RK0 1608 aaPredicted RBP4.96□□□□□ -1.62
SEC23A-207ENST00000554615 CACNA1FO60840 1977 aa4.96□□□□□ -1.62
SEC23A-207ENST00000554615 JPH4Q96JJ6 628 aa4.96□□□□□ -1.62
SEC23A-207ENST00000554615 NWD1Q149M9 1564 aa4.96□□□□□ -1.62
SEC23A-207ENST00000554615 C11orf95C9JLR9 678 aaPredicted RBP4.96□□□□□ -1.62
SEC23A-207ENST00000554615 MYT1Q01538 1121 aa4.95□□□□□ -1.62
SEC23A-207ENST00000554615 APLP2Q06481 763 aa4.95□□□□□ -1.62
SEC23A-207ENST00000554615 TRMT2AQ8IZ69 625 aaKnown RBP4.95□□□□□ -1.62
SEC23A-207ENST00000554615 TESK2Q96S53 571 aa4.95□□□□□ -1.62
SEC23A-207ENST00000554615 FAM208AQ9UK61 1670 aaKnown RBP4.95□□□□□ -1.62
SEC23A-207ENST00000554615 DDX60Q8IY21 1712 aaKnown RBP4.95□□□□□ -1.62
SEC23A-207ENST00000554615 MST1RQ04912 1400 aa4.95□□□□□ -1.62
SEC23A-207ENST00000554615 TONSLQ96HA7 1378 aa4.95□□□□□ -1.62
SEC23A-207ENST00000554615 USP47Q96K76 1375 aa4.95□□□□□ -1.62
SEC23A-207ENST00000554615 SLIT1O75093 1534 aa4.95□□□□□ -1.62
SEC23A-207ENST00000554615 PIK3C2AO00443 1686 aa4.95□□□□□ -1.62
SEC23A-207ENST00000554615 PARP4Q9UKK3 1724 aaKnown RBP4.94□□□□□ -1.62
SEC23A-207ENST00000554615 KDM3BQ7LBC6 1761 aa4.94□□□□□ -1.62
SEC23A-207ENST00000554615 ALKQ9UM73 1620 aa4.94□□□□□ -1.62
SEC23A-207ENST00000554615 CHD2O14647 1828 aaKnown RBP4.94□□□□□ -1.62
SEC23A-207ENST00000554615 FANCIQ9NVI1 1328 aa4.94□□□□□ -1.62
SEC23A-207ENST00000554615 PPIP5K1Q6PFW1 1433 aa4.94□□□□□ -1.62
SEC23A-207ENST00000554615 HNRNPUL2Q1KMD3 747 aaKnown RBP4.93□□□□□ -1.62
SEC23A-207ENST00000554615 SIN3AQ96ST3 1273 aa4.93□□□□□ -1.62
SEC23A-207ENST00000554615 PRKRIP1Q9H875 184 aaPredicted RBP4.93□□□□□ -1.62
SEC23A-207ENST00000554615 TRPM3Q9HCF6 1732 aaPredicted RBP4.93□□□□□ -1.62
SEC23A-207ENST00000554615 GTF3C3Q9Y5Q9 886 aa4.93□□□□□ -1.62
SEC23A-207ENST00000554615 ARHGAP23Q9P227 1491 aa4.92□□□□□ -1.62
SEC23A-207ENST00000554615 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.92□□□□□ -1.62
SEC23A-207ENST00000554615 HSPA5P11021 654 aaKnown RBP4.92□□□□□ -1.62
SEC23A-207ENST00000554615 L3MBTL2Q969R5 705 aa4.92□□□□□ -1.62
SEC23A-207ENST00000554615 PAPPAQ13219 1627 aa4.92□□□□□ -1.62
SEC23A-207ENST00000554615 NPATQ14207 1427 aa4.92□□□□□ -1.62
SEC23A-207ENST00000554615 ADAMTSL3P82987 1691 aa4.91□□□□□ -1.62
SEC23A-207ENST00000554615 ZNF644Q9H582 1327 aaPredicted RBP4.91□□□□□ -1.62
SEC23A-207ENST00000554615 CDK11AQ9UQ88 783 aaPredicted RBP4.91□□□□□ -1.62
SEC23A-207ENST00000554615 ALS2Q96Q42 1657 aa4.91□□□□□ -1.62
SEC23A-207ENST00000554615 NINLQ9Y2I6 1382 aa4.91□□□□□ -1.62
SEC23A-207ENST00000554615 WNK3Q9BYP7 1800 aa4.91□□□□□ -1.62
SEC23A-207ENST00000554615 ATP7BP35670 1465 aa4.9□□□□□ -1.63
SEC23A-207ENST00000554615 MAP2P11137 1827 aaKnown RBP4.9□□□□□ -1.63
SEC23A-207ENST00000554615 TSHZ2Q9NRE2 1034 aa4.9□□□□□ -1.63
SEC23A-207ENST00000554615 GLI3P10071 1580 aa4.89□□□□□ -1.63
SEC23A-207ENST00000554615 POLR3AO14802 1390 aaPredicted RBP4.89□□□□□ -1.63
SEC23A-207ENST00000554615 NSD2O96028 1365 aa4.89□□□□□ -1.63
SEC23A-207ENST00000554615 DISP3Q9P2K9 1392 aa4.89□□□□□ -1.63
SEC23A-207ENST00000554615 NCAPD2Q15021 1401 aa4.89□□□□□ -1.63
SEC23A-207ENST00000554615 PNPLA6Q8IY17 1366 aa4.89□□□□□ -1.63
SEC23A-207ENST00000554615 IBTKQ9P2D0 1353 aaPredicted RBP4.89□□□□□ -1.63
SEC23A-207ENST00000554615 PNISRQ8TF01 805 aaKnown RBP4.89□□□□□ -1.63
SEC23A-207ENST00000554615 CD109Q6YHK3 1445 aa4.88□□□□□ -1.63
SEC23A-207ENST00000554615 TSPOAP1O95153 1857 aa4.88□□□□□ -1.63
SEC23A-207ENST00000554615 HOXD11P31277 338 aaPredicted RBP4.88□□□□□ -1.63
SEC23A-207ENST00000554615 ABCA3Q99758 1704 aa4.87□□□□□ -1.63
SEC23A-207ENST00000554615 EIF4G2P78344 907 aaKnown RBP eCLIP4.87□□□□□ -1.63
SEC23A-207ENST00000554615 RPGRIP1LQ68CZ1 1315 aa4.87□□□□□ -1.63
SEC23A-207ENST00000554615 PKD1L3Q7Z443 1732 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms