RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ADGRB3O60242 1522 aa15.87■□□□□ 0.13
PTCD2P1-201ENST00000554393 ITGAEP38570 1179 aa15.84■□□□□ 0.13
PTCD2P1-201ENST00000554393 SLC52A1Q9NWF4 448 aa15.84■□□□□ 0.13
PTCD2P1-201ENST00000554393 TMEM2Q9UHN6 1383 aa15.84■□□□□ 0.13
PTCD2P1-201ENST00000554393 IDI1Q13907 227 aa15.83■□□□□ 0.12
PTCD2P1-201ENST00000554393 MYO5BQ9ULV0 1848 aa15.82■□□□□ 0.12
PTCD2P1-201ENST00000554393 NUP155O75694 1391 aa15.81■□□□□ 0.12
PTCD2P1-201ENST00000554393 STAG3Q9UJ98 1225 aa15.81■□□□□ 0.12
PTCD2P1-201ENST00000554393 EID1Q9Y6B2 187 aa15.81■□□□□ 0.12
PTCD2P1-201ENST00000554393 STRCP1A6NGW2 1772 aa15.8■□□□□ 0.12
PTCD2P1-201ENST00000554393 TMEM131LA2VDJ0 1609 aa15.8■□□□□ 0.12
PTCD2P1-201ENST00000554393 NAIPQ13075 1403 aa15.8■□□□□ 0.12
PTCD2P1-201ENST00000554393 LTKP29376 864 aa15.79■□□□□ 0.12
PTCD2P1-201ENST00000554393 HSPA1LP34931 641 aa15.79■□□□□ 0.12
PTCD2P1-201ENST00000554393 TXNDC2Q86VQ3 553 aa15.79■□□□□ 0.12
PTCD2P1-201ENST00000554393 SPHKAPQ2M3C7 1700 aa15.79■□□□□ 0.12
PTCD2P1-201ENST00000554393 HFM1A2PYH4 1435 aa15.78■□□□□ 0.12
PTCD2P1-201ENST00000554393 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
PTCD2P1-201ENST00000554393 ZFYVE9O95405 1425 aa15.75■□□□□ 0.11
PTCD2P1-201ENST00000554393 LRRC7Q96NW7 1537 aa15.73■□□□□ 0.11
PTCD2P1-201ENST00000554393 XIRP1Q702N8 1843 aaKnown RBP15.71■□□□□ 0.11
PTCD2P1-201ENST00000554393 RIMS2Q9UQ26 1411 aa15.7■□□□□ 0.1
PTCD2P1-201ENST00000554393 TRPM2O94759 1503 aa15.7■□□□□ 0.1
PTCD2P1-201ENST00000554393 HDGFP51858 240 aaKnown RBP15.7■□□□□ 0.1
PTCD2P1-201ENST00000554393 PLEKHG1Q9ULL1 1385 aa15.7■□□□□ 0.1
PTCD2P1-201ENST00000554393 NWD1Q149M9 1564 aa15.7■□□□□ 0.1
PTCD2P1-201ENST00000554393 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
PTCD2P1-201ENST00000554393 DIP2AQ14689 1571 aa15.68■□□□□ 0.1
PTCD2P1-201ENST00000554393 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.68■□□□□ 0.1
PTCD2P1-201ENST00000554393 CHD2O14647 1828 aaKnown RBP15.68■□□□□ 0.1
PTCD2P1-201ENST00000554393 KIF1BO60333 1816 aa15.68■□□□□ 0.1
PTCD2P1-201ENST00000554393 ALKQ9UM73 1620 aa15.68■□□□□ 0.1
PTCD2P1-201ENST00000554393 TOM1O60784 492 aa15.67■□□□□ 0.1
PTCD2P1-201ENST00000554393 PIP4K2BP78356 416 aa15.67■□□□□ 0.1
PTCD2P1-201ENST00000554393 CLTCL1P53675 1640 aa15.67■□□□□ 0.1
PTCD2P1-201ENST00000554393 NKTRP30414 1462 aaKnown RBP15.66■□□□□ 0.1
PTCD2P1-201ENST00000554393 PPP1R15AO75807 674 aaPredicted RBP15.65■□□□□ 0.1
PTCD2P1-201ENST00000554393 ZBTB22O15209 634 aa15.64■□□□□ 0.09
PTCD2P1-201ENST00000554393 CHGAP10645 457 aaKnown RBP15.64■□□□□ 0.09
PTCD2P1-201ENST00000554393 KCNA6P17658 529 aa15.64■□□□□ 0.09
PTCD2P1-201ENST00000554393 SLC26A8Q96RN1 970 aa15.64■□□□□ 0.09
PTCD2P1-201ENST00000554393 ACIN1Q9UKV3 1341 aaKnown RBP15.62■□□□□ 0.09
PTCD2P1-201ENST00000554393 ADAMTS13Q76LX8 1427 aa15.61■□□□□ 0.09
PTCD2P1-201ENST00000554393 TRIM52Q96A61 297 aa15.61■□□□□ 0.09
PTCD2P1-201ENST00000554393 TBX22Q9Y458 520 aa15.61■□□□□ 0.09
PTCD2P1-201ENST00000554393 SETBP1Q9Y6X0 1596 aa15.61■□□□□ 0.09
PTCD2P1-201ENST00000554393 PIK3R4Q99570 1358 aa15.61■□□□□ 0.09
PTCD2P1-201ENST00000554393 NEXMIFQ5QGS0 1516 aa15.6■□□□□ 0.09
PTCD2P1-201ENST00000554393 BCANQ96GW7 911 aa15.6■□□□□ 0.09
PTCD2P1-201ENST00000554393 NRXN3Q9Y4C0 1643 aa15.6■□□□□ 0.09
PTCD2P1-201ENST00000554393 TMEM94Q12767 1356 aa15.59■□□□□ 0.09
PTCD2P1-201ENST00000554393 RGS17Q9UGC6 210 aaPredicted RBP15.57■□□□□ 0.08
PTCD2P1-201ENST00000554393 NCOA3Q9Y6Q9 1424 aa15.56■□□□□ 0.08
PTCD2P1-201ENST00000554393 SRCAPQ6ZRS2 3230 aa15.55■□□□□ 0.08
PTCD2P1-201ENST00000554393 SETD5Q9C0A6 1442 aa15.55■□□□□ 0.08
PTCD2P1-201ENST00000554393 PROSER2Q86WR7 435 aaPredicted RBP15.55■□□□□ 0.08
PTCD2P1-201ENST00000554393 PPLO60437 1756 aa15.54■□□□□ 0.08
PTCD2P1-201ENST00000554393 XRN1Q8IZH2 1706 aaKnown RBP15.54■□□□□ 0.08
PTCD2P1-201ENST00000554393 ZNF326Q5BKZ1 582 aaKnown RBP15.54■□□□□ 0.08
PTCD2P1-201ENST00000554393 NUTM2DQ5VT03 806 aaPredicted RBP15.54■□□□□ 0.08
PTCD2P1-201ENST00000554393 MSH6P52701 1360 aa15.52■□□□□ 0.08
PTCD2P1-201ENST00000554393 FAM135BQ49AJ0 1406 aa15.51■□□□□ 0.07
PTCD2P1-201ENST00000554393 SETD1AO15047 1707 aaKnown RBP15.51■□□□□ 0.07
PTCD2P1-201ENST00000554393 RPGRIP1LQ68CZ1 1315 aa15.51■□□□□ 0.07
PTCD2P1-201ENST00000554393 CACNB1Q02641 598 aaPredicted RBP15.51■□□□□ 0.07
PTCD2P1-201ENST00000554393 MPHOSPH9Q99550 1183 aa15.51■□□□□ 0.07
PTCD2P1-201ENST00000554393 CCDC144AA2RUR9 1427 aa15.51■□□□□ 0.07
PTCD2P1-201ENST00000554393 IFT172Q9UG01 1749 aa15.5■□□□□ 0.07
PTCD2P1-201ENST00000554393 ROBO1Q9Y6N7 1651 aa15.5■□□□□ 0.07
PTCD2P1-201ENST00000554393 PTPRUQ92729 1446 aa15.49■□□□□ 0.07
PTCD2P1-201ENST00000554393 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.48■□□□□ 0.07
PTCD2P1-201ENST00000554393 VGFO15240 615 aaPredicted RBP15.48■□□□□ 0.07
PTCD2P1-201ENST00000554393 RAB3GAP2Q9H2M9 1393 aa15.48■□□□□ 0.07
PTCD2P1-201ENST00000554393 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
PTCD2P1-201ENST00000554393 SPATA31E1Q6ZUB1 1445 aa15.46■□□□□ 0.07
PTCD2P1-201ENST00000554393 MYCNP04198 464 aaPredicted RBP15.46■□□□□ 0.07
PTCD2P1-201ENST00000554393 RBM33Q96EV2 1170 aaKnown RBP15.46■□□□□ 0.07
PTCD2P1-201ENST00000554393 RNF39Q9H2S5 420 aa15.46■□□□□ 0.07
PTCD2P1-201ENST00000554393 AMOTL2Q9Y2J4 779 aa15.46■□□□□ 0.07
PTCD2P1-201ENST00000554393 METP08581 1390 aa15.46■□□□□ 0.07
PTCD2P1-201ENST00000554393 DCCP43146 1447 aa15.45■□□□□ 0.06
PTCD2P1-201ENST00000554393 PRAG1Q86YV5 1406 aa15.45■□□□□ 0.06
PTCD2P1-201ENST00000554393 POTEAQ6S8J7 498 aa15.44■□□□□ 0.06
PTCD2P1-201ENST00000554393 HRCP23327 699 aa15.43■□□□□ 0.06
PTCD2P1-201ENST00000554393 C19orf44Q9H6X5 657 aa15.43■□□□□ 0.06
PTCD2P1-201ENST00000554393 PTCH1Q13635 1447 aa15.43■□□□□ 0.06
PTCD2P1-201ENST00000554393 ANKRD30BQ9BXX2 1392 aa15.42■□□□□ 0.06
PTCD2P1-201ENST00000554393 CADPS2Q86UW7 1296 aa15.42■□□□□ 0.06
PTCD2P1-201ENST00000554393 SLAIN2Q9P270 581 aa15.42■□□□□ 0.06
PTCD2P1-201ENST00000554393 NALCNQ8IZF0 1738 aa15.42■□□□□ 0.06
PTCD2P1-201ENST00000554393 PHLPP1O60346 1717 aa15.41■□□□□ 0.06
PTCD2P1-201ENST00000554393 C14orf37Q86TY3 774 aa15.41■□□□□ 0.06
PTCD2P1-201ENST00000554393 ADGRL3Q9HAR2 1447 aa15.4■□□□□ 0.06
PTCD2P1-201ENST00000554393 ATF3P18847 181 aa15.39■□□□□ 0.05
PTCD2P1-201ENST00000554393 LAMC1P11047 1609 aa15.38■□□□□ 0.05
PTCD2P1-201ENST00000554393 AHDC1Q5TGY3 1603 aaPredicted RBP15.38■□□□□ 0.05
PTCD2P1-201ENST00000554393 KNDC1Q76NI1 1749 aa15.37■□□□□ 0.05
PTCD2P1-201ENST00000554393 PIK3C2GO75747 1445 aa15.37■□□□□ 0.05
PTCD2P1-201ENST00000554393 COL16A1Q07092 1604 aaPredicted RBP15.37■□□□□ 0.05
PTCD2P1-201ENST00000554393 MYOM2P54296 1465 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms