RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 RBM27Q9P2N5 1060 aaKnown RBP10.67□□□□□ -0.7
CHD8-207ENST00000554384 DDRGK1Q96HY6 314 aa10.66□□□□□ -0.7
CHD8-207ENST00000554384 NBPF3Q9H094 633 aa10.66□□□□□ -0.7
CHD8-207ENST00000554384 SMAPO00193 183 aa10.65□□□□□ -0.7
CHD8-207ENST00000554384 NUDT18Q6ZVK8 323 aa10.65□□□□□ -0.7
CHD8-207ENST00000554384 EYA1Q99502 592 aa10.65□□□□□ -0.7
CHD8-207ENST00000554384 RABGEF1Q9UJ41 708 aa10.65□□□□□ -0.7
CHD8-207ENST00000554384 RBM46Q8TBY0 533 aaKnown RBP10.64□□□□□ -0.71
CHD8-207ENST00000554384 RCCD1A6NED2 376 aa10.63□□□□□ -0.71
CHD8-207ENST00000554384 TRIM6-TRIM34B2RNG4 842 aa10.63□□□□□ -0.71
CHD8-207ENST00000554384 FAM217BQ9NTX9 383 aaPredicted RBP10.63□□□□□ -0.71
CHD8-207ENST00000554384 PNMA3Q9UL41 463 aa10.62□□□□□ -0.71
CHD8-207ENST00000554384 IFFO2Q5TF58 517 aa10.61□□□□□ -0.71
CHD8-207ENST00000554384 C14orf37Q86TY3 774 aa10.61□□□□□ -0.71
CHD8-207ENST00000554384 TATDN2Q93075 761 aa10.61□□□□□ -0.71
CHD8-207ENST00000554384 BEGAINQ9BUH8 593 aa10.61□□□□□ -0.71
CHD8-207ENST00000554384 KIAA1468Q9P260 1216 aa10.6□□□□□ -0.71
CHD8-207ENST00000554384 BCAMP50895 628 aa10.58□□□□□ -0.72
CHD8-207ENST00000554384 PACS2Q86VP3 889 aa10.58□□□□□ -0.72
CHD8-207ENST00000554384 DAXXQ9UER7 740 aaPredicted RBP10.57□□□□□ -0.72
CHD8-207ENST00000554384 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.56□□□□□ -0.72
CHD8-207ENST00000554384 ANKK1Q8NFD2 765 aa10.56□□□□□ -0.72
CHD8-207ENST00000554384 A0A0G2JS52 829 aa10.55□□□□□ -0.72
CHD8-207ENST00000554384 NBPF26B4DH59 902 aa10.55□□□□□ -0.72
CHD8-207ENST00000554384 LAPTM4BQ86VI4 370 aa10.55□□□□□ -0.72
CHD8-207ENST00000554384 ZFRQ96KR1 1074 aaKnown RBP10.55□□□□□ -0.72
CHD8-207ENST00000554384 POLR3EQ9NVU0 708 aa10.55□□□□□ -0.72
CHD8-207ENST00000554384 PROCA1Q8NCQ7 364 aaPredicted RBP10.54□□□□□ -0.72
CHD8-207ENST00000554384 SEPT9Q9UHD8 586 aaPredicted RBP10.54□□□□□ -0.72
CHD8-207ENST00000554384 SOWAHBA6NEL2 793 aa10.53□□□□□ -0.72
CHD8-207ENST00000554384 DDX11L8A8MPP1 907 aa10.53□□□□□ -0.72
CHD8-207ENST00000554384 ONECUT3O60422 494 aaPredicted RBP10.52□□□□□ -0.73
CHD8-207ENST00000554384 DNAJB2P25686 324 aa10.52□□□□□ -0.73
CHD8-207ENST00000554384 TMEM134Q9H6X4 195 aa10.52□□□□□ -0.73
CHD8-207ENST00000554384 SH3D19Q5HYK7 790 aa10.51□□□□□ -0.73
CHD8-207ENST00000554384 TBC1D2Q9BYX2 928 aa10.51□□□□□ -0.73
CHD8-207ENST00000554384 MYSM1Q5VVJ2 828 aa10.5□□□□□ -0.73
CHD8-207ENST00000554384 PCMTD1Q96MG8 357 aaPredicted RBP10.5□□□□□ -0.73
CHD8-207ENST00000554384 GOPCQ9HD26 462 aa10.5□□□□□ -0.73
CHD8-207ENST00000554384 WBP1LQ9NX94 342 aa10.5□□□□□ -0.73
CHD8-207ENST00000554384 RGS20O76081 388 aa10.49□□□□□ -0.73
CHD8-207ENST00000554384 CD46P15529 392 aa10.49□□□□□ -0.73
CHD8-207ENST00000554384 ITGBL1O95965 494 aaPredicted RBP10.48□□□□□ -0.73
CHD8-207ENST00000554384 SKIV2LQ15477 1246 aaKnown RBP10.48□□□□□ -0.73
CHD8-207ENST00000554384 ATP1B4Q9UN42 357 aaPredicted RBP10.48□□□□□ -0.73
CHD8-207ENST00000554384 SWT1Q5T5J6 900 aaKnown RBP10.47□□□□□ -0.73
CHD8-207ENST00000554384 FBXO31Q5XUX0 539 aaPredicted RBP10.47□□□□□ -0.73
CHD8-207ENST00000554384 SPIRE2Q8WWL2 714 aa10.47□□□□□ -0.73
CHD8-207ENST00000554384 FAM98CQ17RN3 349 aaKnown RBP10.46□□□□□ -0.73
CHD8-207ENST00000554384 RSPH6AQ9H0K4 717 aa10.46□□□□□ -0.73
CHD8-207ENST00000554384 RDH13Q8NBN7 331 aa10.45□□□□□ -0.74
CHD8-207ENST00000554384 LIMD1Q9UGP4 676 aa10.45□□□□□ -0.74
CHD8-207ENST00000554384 SLC10A3P09131 477 aa10.44□□□□□ -0.74
CHD8-207ENST00000554384 NDUFV2P19404 249 aa10.43□□□□□ -0.74
CHD8-207ENST00000554384 ERICH6Q7L0X2 663 aa10.43□□□□□ -0.74
CHD8-207ENST00000554384 SULF1Q8IWU6 871 aa10.43□□□□□ -0.74
CHD8-207ENST00000554384 NYAP1Q6ZVC0 841 aa10.42□□□□□ -0.74
CHD8-207ENST00000554384 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.42□□□□□ -0.74
CHD8-207ENST00000554384 MOXD2PA6NHM9 499 aa10.41□□□□□ -0.74
CHD8-207ENST00000554384 SUPT5HO00267 1087 aaKnown RBP10.41□□□□□ -0.74
CHD8-207ENST00000554384 CLK2P49760 499 aaKnown RBP10.41□□□□□ -0.74
CHD8-207ENST00000554384 CSPP1Q1MSJ5 1256 aa10.41□□□□□ -0.74
CHD8-207ENST00000554384 NUTM1Q86Y26 1132 aa10.41□□□□□ -0.74
CHD8-207ENST00000554384 IRX2Q9BZI1 471 aaPredicted RBP10.41□□□□□ -0.74
CHD8-207ENST00000554384 HPS5Q9UPZ3 1129 aa10.41□□□□□ -0.74
CHD8-207ENST00000554384 SAMD7Q7Z3H4 446 aa10.4□□□□□ -0.74
CHD8-207ENST00000554384 RIC3Q7Z5B4 369 aa10.4□□□□□ -0.74
CHD8-207ENST00000554384 LRCH3Q96II8 777 aa10.4□□□□□ -0.74
CHD8-207ENST00000554384 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.74
CHD8-207ENST00000554384 TSR3Q9UJK0 312 aaKnown RBP10.4□□□□□ -0.74
CHD8-207ENST00000554384 PCDHB15Q9Y5E8 787 aa10.39□□□□□ -0.75
CHD8-207ENST00000554384 GCGRP47871 477 aa10.38□□□□□ -0.75
CHD8-207ENST00000554384 KCNC4Q03721 635 aa10.38□□□□□ -0.75
CHD8-207ENST00000554384 HLA-CQ95604 372 aa10.38□□□□□ -0.75
CHD8-207ENST00000554384 RSBN1LQ6PCB5 846 aaPredicted RBP10.37□□□□□ -0.75
CHD8-207ENST00000554384 SPTLC1O15269 473 aa10.36□□□□□ -0.75
CHD8-207ENST00000554384 KDM4AO75164 1064 aa10.36□□□□□ -0.75
CHD8-207ENST00000554384 GUCA2AQ02747 115 aa10.36□□□□□ -0.75
CHD8-207ENST00000554384 RNF40O75150 1001 aa10.35□□□□□ -0.75
CHD8-207ENST00000554384 QPCTQ16769 361 aa10.35□□□□□ -0.75
CHD8-207ENST00000554384 HDGFP51858 240 aaKnown RBP10.34□□□□□ -0.75
CHD8-207ENST00000554384 DIXDC1Q155Q3 683 aa10.34□□□□□ -0.75
CHD8-207ENST00000554384 CABLES1Q8TDN4 633 aa10.34□□□□□ -0.75
CHD8-207ENST00000554384 ZMYND15Q9H091 742 aa10.34□□□□□ -0.75
CHD8-207ENST00000554384 RFC5P40937 340 aa10.32□□□□□ -0.76
CHD8-207ENST00000554384 PPP4CP60510 307 aa10.32□□□□□ -0.76
CHD8-207ENST00000554384 PCDHGC3Q9UN70 934 aa10.32□□□□□ -0.76
CHD8-207ENST00000554384 HOXA2O43364 376 aa10.31□□□□□ -0.76
CHD8-207ENST00000554384 CFHP08603 1231 aa10.31□□□□□ -0.76
CHD8-207ENST00000554384 RTL5Q5HYW3 569 aaPredicted RBP10.31□□□□□ -0.76
CHD8-207ENST00000554384 RSPH4AQ5TD94 716 aa10.31□□□□□ -0.76
CHD8-207ENST00000554384 FLIIQ13045 1269 aa10.3□□□□□ -0.76
CHD8-207ENST00000554384 MCM6Q14566 821 aa10.3□□□□□ -0.76
CHD8-207ENST00000554384 SLF2Q8IX21 1173 aa10.3□□□□□ -0.76
CHD8-207ENST00000554384 CLUAP1Q96AJ1 413 aa10.3□□□□□ -0.76
CHD8-207ENST00000554384 SNRKQ9NRH2 765 aa10.3□□□□□ -0.76
CHD8-207ENST00000554384 FDX1P10109 184 aa10.29□□□□□ -0.76
CHD8-207ENST00000554384 FUT2Q10981 343 aa10.29□□□□□ -0.76
CHD8-207ENST00000554384 TJAP1Q5JTD0 557 aa10.29□□□□□ -0.76
CHD8-207ENST00000554384 LILRB3O75022 631 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms