RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 MADDQ8WXG6 1647 aa19.89■□□□□ 0.78
PPP4R3A-201ENST00000554308 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
PPP4R3A-201ENST00000554308 MLECQ14165 292 aa19.88■□□□□ 0.77
PPP4R3A-201ENST00000554308 FANCIQ9NVI1 1328 aa19.86■□□□□ 0.77
PPP4R3A-201ENST00000554308 NOS1P29475 1434 aa19.85■□□□□ 0.77
PPP4R3A-201ENST00000554308 IDI1Q13907 227 aa19.85■□□□□ 0.77
PPP4R3A-201ENST00000554308 KIF1BO60333 1816 aa19.84■□□□□ 0.77
PPP4R3A-201ENST00000554308 FBXO31Q5XUX0 539 aaPredicted RBP19.84■□□□□ 0.77
PPP4R3A-201ENST00000554308 PANK3Q9H999 370 aa19.83■□□□□ 0.76
PPP4R3A-201ENST00000554308 LAMC1P11047 1609 aa19.83■□□□□ 0.76
PPP4R3A-201ENST00000554308 COL17A1Q9UMD9 1497 aaPredicted RBP19.82■□□□□ 0.76
PPP4R3A-201ENST00000554308 SCAF11Q99590 1463 aaKnown RBP19.82■□□□□ 0.76
PPP4R3A-201ENST00000554308 MROH2AA6NES4 1674 aa19.81■□□□□ 0.76
PPP4R3A-201ENST00000554308 CAMSAP1Q5T5Y3 1602 aa19.81■□□□□ 0.76
PPP4R3A-201ENST00000554308 B4GALNT3Q6L9W6 998 aa19.81■□□□□ 0.76
PPP4R3A-201ENST00000554308 TMEM132EQ6IEE7 984 aa19.8■□□□□ 0.76
PPP4R3A-201ENST00000554308 PPP4R2Q9NY27 417 aa19.8■□□□□ 0.76
PPP4R3A-201ENST00000554308 CC2D1BQ5T0F9 858 aaKnown RBP19.79■□□□□ 0.76
PPP4R3A-201ENST00000554308 TMC1Q8TDI8 760 aa19.79■□□□□ 0.76
PPP4R3A-201ENST00000554308 ZMYM4Q5VZL5 1548 aa19.79■□□□□ 0.76
PPP4R3A-201ENST00000554308 PER1O15534 1290 aaPredicted RBP19.78■□□□□ 0.76
PPP4R3A-201ENST00000554308 MYOM2P54296 1465 aa19.78■□□□□ 0.76
PPP4R3A-201ENST00000554308 TRAK1Q9UPV9 953 aa19.78■□□□□ 0.76
PPP4R3A-201ENST00000554308 ADGRB3O60242 1522 aa19.78■□□□□ 0.76
PPP4R3A-201ENST00000554308 SIGLEC1Q9BZZ2 1709 aa19.78■□□□□ 0.76
PPP4R3A-201ENST00000554308 NEURL4Q96JN8 1562 aa19.78■□□□□ 0.76
PPP4R3A-201ENST00000554308 ERICH6Q7L0X2 663 aa19.77■□□□□ 0.76
PPP4R3A-201ENST00000554308 EIF3AQ14152 1382 aaKnown RBP19.76■□□□□ 0.75
PPP4R3A-201ENST00000554308 SENP3-EIF4A1A0A087X0R7 540 aa19.76■□□□□ 0.75
PPP4R3A-201ENST00000554308 SLC52A1Q9NWF4 448 aa19.76■□□□□ 0.75
PPP4R3A-201ENST00000554308 ARHGAP31Q2M1Z3 1444 aa19.76■□□□□ 0.75
PPP4R3A-201ENST00000554308 VGFO15240 615 aaPredicted RBP19.75■□□□□ 0.75
PPP4R3A-201ENST00000554308 RPGRIP1LQ68CZ1 1315 aa19.75■□□□□ 0.75
PPP4R3A-201ENST00000554308 SYNMO15061 1565 aa19.74■□□□□ 0.75
PPP4R3A-201ENST00000554308 C14orf93Q9H972 538 aaKnown RBP19.74■□□□□ 0.75
PPP4R3A-201ENST00000554308 KIF13AQ9H1H9 1805 aa19.74■□□□□ 0.75
PPP4R3A-201ENST00000554308 RALBP1Q15311 655 aa19.74■□□□□ 0.75
PPP4R3A-201ENST00000554308 CDCA8Q53HL2 280 aa19.73■□□□□ 0.75
PPP4R3A-201ENST00000554308 STAG3Q9UJ98 1225 aa19.73■□□□□ 0.75
PPP4R3A-201ENST00000554308 IQGAP1P46940 1657 aa19.73■□□□□ 0.75
PPP4R3A-201ENST00000554308 KTN1Q86UP2 1357 aaKnown RBP19.72■□□□□ 0.75
PPP4R3A-201ENST00000554308 MYBBP1AQ9BQG0 1328 aaKnown RBP19.72■□□□□ 0.75
PPP4R3A-201ENST00000554308 ERICH6BQ5W0A0 696 aa19.71■□□□□ 0.75
PPP4R3A-201ENST00000554308 NRXN1Q9ULB1 1477 aa19.71■□□□□ 0.75
PPP4R3A-201ENST00000554308 PIK3C2GO75747 1445 aa19.71■□□□□ 0.75
PPP4R3A-201ENST00000554308 ESF1Q9H501 851 aaKnown RBP19.7■□□□□ 0.74
PPP4R3A-201ENST00000554308 ZBED9Q6R2W3 1325 aa19.7■□□□□ 0.74
PPP4R3A-201ENST00000554308 IFT172Q9UG01 1749 aa19.7■□□□□ 0.74
PPP4R3A-201ENST00000554308 PNISRQ8TF01 805 aaKnown RBP19.69■□□□□ 0.74
PPP4R3A-201ENST00000554308 ZC3H13Q5T200 1668 aaKnown RBP19.69■□□□□ 0.74
PPP4R3A-201ENST00000554308 KNSTRNQ9Y448 316 aa19.68■□□□□ 0.74
PPP4R3A-201ENST00000554308 KIAA1210Q9ULL0 1709 aa19.68■□□□□ 0.74
PPP4R3A-201ENST00000554308 CENPJQ9HC77 1338 aaPredicted RBP19.67■□□□□ 0.74
PPP4R3A-201ENST00000554308 PPP6R1Q9UPN7 881 aa19.67■□□□□ 0.74
PPP4R3A-201ENST00000554308 TRHP20396 242 aaPredicted RBP19.66■□□□□ 0.74
PPP4R3A-201ENST00000554308 STK26Q9P289 416 aa19.66■□□□□ 0.74
PPP4R3A-201ENST00000554308 PIK3C2BO00750 1634 aa19.66■□□□□ 0.74
PPP4R3A-201ENST00000554308 PPLO60437 1756 aa19.66■□□□□ 0.74
PPP4R3A-201ENST00000554308 SAFB2Q14151 953 aaKnown RBP eCLIP19.65■□□□□ 0.74
PPP4R3A-201ENST00000554308 NLRP13Q86W25 1043 aa19.65■□□□□ 0.74
PPP4R3A-201ENST00000554308 PARD3Q8TEW0 1356 aa19.65■□□□□ 0.74
PPP4R3A-201ENST00000554308 AGLP35573 1532 aa19.64■□□□□ 0.73
PPP4R3A-201ENST00000554308 PREX1Q8TCU6 1659 aa19.63■□□□□ 0.73
PPP4R3A-201ENST00000554308 BRD4O60885 1362 aaPredicted RBP19.63■□□□□ 0.73
PPP4R3A-201ENST00000554308 SLC24A1O60721 1099 aa19.63■□□□□ 0.73
PPP4R3A-201ENST00000554308 ERVK-7P63135 1459 aa19.62■□□□□ 0.73
PPP4R3A-201ENST00000554308 NEXMIFQ5QGS0 1516 aa19.62■□□□□ 0.73
PPP4R3A-201ENST00000554308 REREQ9P2R6 1566 aa19.61■□□□□ 0.73
PPP4R3A-201ENST00000554308 CLTCQ00610 1675 aaKnown RBP19.6■□□□□ 0.73
PPP4R3A-201ENST00000554308 ADGRB1O14514 1584 aa19.59■□□□□ 0.73
PPP4R3A-201ENST00000554308 AMER1Q5JTC6 1135 aaPredicted RBP19.59■□□□□ 0.73
PPP4R3A-201ENST00000554308 ZMYM3Q14202 1370 aa19.59■□□□□ 0.73
PPP4R3A-201ENST00000554308 ARHGEF40Q8TER5 1519 aa19.58■□□□□ 0.73
PPP4R3A-201ENST00000554308 SETBP1Q9Y6X0 1596 aa19.58■□□□□ 0.72
PPP4R3A-201ENST00000554308 PLPPR3Q6T4P5 718 aa19.57■□□□□ 0.72
PPP4R3A-201ENST00000554308 SALL2Q9Y467 1007 aaPredicted RBP19.57■□□□□ 0.72
PPP4R3A-201ENST00000554308 TMEM131LA2VDJ0 1609 aa19.57■□□□□ 0.72
PPP4R3A-201ENST00000554308 PAK3O75914 559 aaPredicted RBP19.57■□□□□ 0.72
PPP4R3A-201ENST00000554308 MYO5BQ9ULV0 1848 aa19.56■□□□□ 0.72
PPP4R3A-201ENST00000554308 SLC12A5Q9H2X9 1139 aa19.56■□□□□ 0.72
PPP4R3A-201ENST00000554308 CARD14Q9BXL6 1004 aa19.56■□□□□ 0.72
PPP4R3A-201ENST00000554308 SBNO2Q9Y2G9 1366 aa19.54■□□□□ 0.72
PPP4R3A-201ENST00000554308 ZFYVE9O95405 1425 aa19.53■□□□□ 0.72
PPP4R3A-201ENST00000554308 DEKP35659 375 aaKnown RBP19.53■□□□□ 0.72
PPP4R3A-201ENST00000554308 KDM5AP29375 1690 aaKnown RBP19.53■□□□□ 0.72
PPP4R3A-201ENST00000554308 SMG6Q86US8 1419 aaKnown RBP19.52■□□□□ 0.72
PPP4R3A-201ENST00000554308 PPP2R1AP30153 589 aa19.52■□□□□ 0.72
PPP4R3A-201ENST00000554308 NBR1Q14596 966 aa19.52■□□□□ 0.72
PPP4R3A-201ENST00000554308 LRPPRCP42704 1394 aaKnown RBP19.52■□□□□ 0.72
PPP4R3A-201ENST00000554308 CABP2Q9NPB3 220 aa19.52■□□□□ 0.71
PPP4R3A-201ENST00000554308 NOP58Q9Y2X3 529 aaKnown RBP19.52■□□□□ 0.71
PPP4R3A-201ENST00000554308 CEBPAP49715 358 aaPredicted RBP19.51■□□□□ 0.71
PPP4R3A-201ENST00000554308 PRAM1Q96QH2 718 aa19.51■□□□□ 0.71
PPP4R3A-201ENST00000554308 POGKQ9P215 609 aa19.51■□□□□ 0.71
PPP4R3A-201ENST00000554308 EVC2Q86UK5 1308 aa19.5■□□□□ 0.71
PPP4R3A-201ENST00000554308 NUDCQ9Y266 331 aa19.5■□□□□ 0.71
PPP4R3A-201ENST00000554308 A2ML1A8K2U0 1454 aa19.49■□□□□ 0.71
PPP4R3A-201ENST00000554308 MINK1Q8N4C8 1332 aaPredicted RBP19.49■□□□□ 0.71
PPP4R3A-201ENST00000554308 MYOM1P52179 1685 aa19.49■□□□□ 0.71
PPP4R3A-201ENST00000554308 ASXL1Q8IXJ9 1541 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms