RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 HDGFP51858 240 aaKnown RBP12.67□□□□□ -0.38
ACTN1-212ENST00000554158 SLC26A8Q96RN1 970 aa12.67□□□□□ -0.38
ACTN1-212ENST00000554158 MSH6P52701 1360 aa12.67□□□□□ -0.38
ACTN1-212ENST00000554158 ADGRB3O60242 1522 aa12.67□□□□□ -0.38
ACTN1-212ENST00000554158 IDI1Q13907 227 aa12.66□□□□□ -0.38
ACTN1-212ENST00000554158 NKTRP30414 1462 aaKnown RBP12.65□□□□□ -0.38
ACTN1-212ENST00000554158 FGD6Q6ZV73 1430 aa12.65□□□□□ -0.38
ACTN1-212ENST00000554158 GCC2Q8IWJ2 1684 aa12.65□□□□□ -0.38
ACTN1-212ENST00000554158 LMTK2Q8IWU2 1503 aa12.65□□□□□ -0.38
ACTN1-212ENST00000554158 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.39
ACTN1-212ENST00000554158 C14orf37Q86TY3 774 aa12.64□□□□□ -0.39
ACTN1-212ENST00000554158 SLC52A1Q9NWF4 448 aa12.64□□□□□ -0.39
ACTN1-212ENST00000554158 TET3O43151 1660 aa12.62□□□□□ -0.39
ACTN1-212ENST00000554158 NWD1Q149M9 1564 aa12.62□□□□□ -0.39
ACTN1-212ENST00000554158 FAM50AQ14320 339 aaKnown RBP12.62□□□□□ -0.39
ACTN1-212ENST00000554158 RBM33Q96EV2 1170 aaKnown RBP12.62□□□□□ -0.39
ACTN1-212ENST00000554158 RPRD2Q5VT52 1461 aaKnown RBP12.61□□□□□ -0.39
ACTN1-212ENST00000554158 CHGAP10645 457 aaKnown RBP12.61□□□□□ -0.39
ACTN1-212ENST00000554158 RGS17Q9UGC6 210 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-212ENST00000554158 MEX3CQ5U5Q3 659 aaKnown RBP12.6□□□□□ -0.39
ACTN1-212ENST00000554158 SLAIN2Q9P270 581 aa12.6□□□□□ -0.39
ACTN1-212ENST00000554158 NOS1P29475 1434 aa12.6□□□□□ -0.39
ACTN1-212ENST00000554158 JCADQ9P266 1359 aa12.59□□□□□ -0.39
ACTN1-212ENST00000554158 SETD1AO15047 1707 aaKnown RBP12.59□□□□□ -0.39
ACTN1-212ENST00000554158 POTEAQ6S8J7 498 aa12.58□□□□□ -0.4
ACTN1-212ENST00000554158 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.58□□□□□ -0.4
ACTN1-212ENST00000554158 ANKRD50Q9ULJ7 1429 aa12.58□□□□□ -0.4
ACTN1-212ENST00000554158 ADGRL2O95490 1459 aa12.58□□□□□ -0.4
ACTN1-212ENST00000554158 PLEKHG1Q9ULL1 1385 aa12.57□□□□□ -0.4
ACTN1-212ENST00000554158 RIMS2Q9UQ26 1411 aa12.57□□□□□ -0.4
ACTN1-212ENST00000554158 TMEM131LA2VDJ0 1609 aa12.56□□□□□ -0.4
ACTN1-212ENST00000554158 ATF3P18847 181 aa12.56□□□□□ -0.4
ACTN1-212ENST00000554158 DIP2AQ14689 1571 aa12.56□□□□□ -0.4
ACTN1-212ENST00000554158 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-212ENST00000554158 CADPS2Q86UW7 1296 aa12.54□□□□□ -0.4
ACTN1-212ENST00000554158 ZFYVE9O95405 1425 aa12.54□□□□□ -0.4
ACTN1-212ENST00000554158 NCOA3Q9Y6Q9 1424 aa12.54□□□□□ -0.4
ACTN1-212ENST00000554158 UNC13BO14795 1591 aa12.53□□□□□ -0.4
ACTN1-212ENST00000554158 COL16A1Q07092 1604 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-212ENST00000554158 ZNF772Q68DY9 489 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-212ENST00000554158 TBX22Q9Y458 520 aa12.53□□□□□ -0.4
ACTN1-212ENST00000554158 E9PCH4 1651 aa12.53□□□□□ -0.4
ACTN1-212ENST00000554158 SPATA31A6Q5VVP1 1343 aa12.53□□□□□ -0.4
ACTN1-212ENST00000554158 SHPRHQ149N8 1683 aa12.52□□□□□ -0.4
ACTN1-212ENST00000554158 TRPM2O94759 1503 aa12.52□□□□□ -0.41
ACTN1-212ENST00000554158 NUTM2DQ5VT03 806 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-212ENST00000554158 C19orf44Q9H6X5 657 aa12.51□□□□□ -0.41
ACTN1-212ENST00000554158 MSH5O43196 834 aa12.5□□□□□ -0.41
ACTN1-212ENST00000554158 PIK3R4Q99570 1358 aa12.5□□□□□ -0.41
ACTN1-212ENST00000554158 IQGAP3Q86VI3 1631 aa12.5□□□□□ -0.41
ACTN1-212ENST00000554158 AHDC1Q5TGY3 1603 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-212ENST00000554158 TRIM52Q96A61 297 aa12.49□□□□□ -0.41
ACTN1-212ENST00000554158 SPHKAPQ2M3C7 1700 aa12.48□□□□□ -0.41
ACTN1-212ENST00000554158 NUTM2BA6NNL0 878 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-212ENST00000554158 NUTM2EB1AL46 878 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-212ENST00000554158 ZNF326Q5BKZ1 582 aaKnown RBP12.47□□□□□ -0.41
ACTN1-212ENST00000554158 NUTM2AQ8IVF1 878 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-212ENST00000554158 RXRBP28702 533 aa12.46□□□□□ -0.41
ACTN1-212ENST00000554158 AMOTL2Q9Y2J4 779 aa12.46□□□□□ -0.41
ACTN1-212ENST00000554158 KIF1BO60333 1816 aa12.46□□□□□ -0.42
ACTN1-212ENST00000554158 NUP155O75694 1391 aa12.45□□□□□ -0.42
ACTN1-212ENST00000554158 ITGAEP38570 1179 aa12.45□□□□□ -0.42
ACTN1-212ENST00000554158 ADAMTS13Q76LX8 1427 aa12.45□□□□□ -0.42
ACTN1-212ENST00000554158 LRP6O75581 1613 aa12.44□□□□□ -0.42
ACTN1-212ENST00000554158 ROCK1Q13464 1354 aa12.44□□□□□ -0.42
ACTN1-212ENST00000554158 ZBTB22O15209 634 aa12.44□□□□□ -0.42
ACTN1-212ENST00000554158 DCCP43146 1447 aa12.44□□□□□ -0.42
ACTN1-212ENST00000554158 NHSL1Q5SYE7 1610 aa12.42□□□□□ -0.42
ACTN1-212ENST00000554158 BRINP3Q76B58 766 aa12.42□□□□□ -0.42
ACTN1-212ENST00000554158 XRN1Q8IZH2 1706 aaKnown RBP12.42□□□□□ -0.42
ACTN1-212ENST00000554158 ASXL1Q8IXJ9 1541 aa12.42□□□□□ -0.42
ACTN1-212ENST00000554158 UPF1Q92900 1129 aaKnown RBP eCLIP12.41□□□□□ -0.42
ACTN1-212ENST00000554158 LRRC59Q96AG4 307 aaKnown RBP12.41□□□□□ -0.42
ACTN1-212ENST00000554158 AFF2P51816 1311 aa12.4□□□□□ -0.42
ACTN1-212ENST00000554158 SETBP1Q9Y6X0 1596 aa12.4□□□□□ -0.42
ACTN1-212ENST00000554158 CDK12Q9NYV4 1490 aaPredicted RBP12.4□□□□□ -0.43
ACTN1-212ENST00000554158 C8orf37Q96NL8 207 aa12.39□□□□□ -0.43
ACTN1-212ENST00000554158 NRXN3Q9Y4C0 1643 aa12.39□□□□□ -0.43
ACTN1-212ENST00000554158 NALCNQ8IZF0 1738 aa12.38□□□□□ -0.43
ACTN1-212ENST00000554158 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
ACTN1-212ENST00000554158 PTPRUQ92729 1446 aa12.37□□□□□ -0.43
ACTN1-212ENST00000554158 SETD5Q9C0A6 1442 aa12.37□□□□□ -0.43
ACTN1-212ENST00000554158 MST1RQ04912 1400 aa12.37□□□□□ -0.43
ACTN1-212ENST00000554158 NGLY1Q96IV0 654 aa12.36□□□□□ -0.43
ACTN1-212ENST00000554158 ADGRL3Q9HAR2 1447 aa12.36□□□□□ -0.43
ACTN1-212ENST00000554158 RBM6P78332 1123 aaKnown RBP12.35□□□□□ -0.43
ACTN1-212ENST00000554158 QTRT2Q9H974 415 aaKnown RBP12.35□□□□□ -0.43
ACTN1-212ENST00000554158 CLTCL1P53675 1640 aa12.34□□□□□ -0.43
ACTN1-212ENST00000554158 METP08581 1390 aa12.33□□□□□ -0.44
ACTN1-212ENST00000554158 ADAMTS2O95450 1211 aa12.33□□□□□ -0.44
ACTN1-212ENST00000554158 NEXMIFQ5QGS0 1516 aa12.32□□□□□ -0.44
ACTN1-212ENST00000554158 PNPLA6Q8IY17 1366 aa12.32□□□□□ -0.44
ACTN1-212ENST00000554158 VGFO15240 615 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-212ENST00000554158 DDX17Q92841 729 aaKnown RBP12.31□□□□□ -0.44
ACTN1-212ENST00000554158 ATAD2Q6PL18 1390 aa12.3□□□□□ -0.44
ACTN1-212ENST00000554158 USP21Q9UK80 565 aa12.3□□□□□ -0.44
ACTN1-212ENST00000554158 MARF1Q9Y4F3 1742 aaKnown RBP12.3□□□□□ -0.44
ACTN1-212ENST00000554158 RGS12O14924 1447 aa12.29□□□□□ -0.44
ACTN1-212ENST00000554158 C1orf167Q5SNV9 1468 aa12.29□□□□□ -0.44
ACTN1-212ENST00000554158 PPARGC1BQ86YN6 1023 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms