RNA–Protein interactions for RNA: ENST00000554014.6

NUMB-208, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 1,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-208ENST00000554014 CCDC144AA2RUR9 1427 aa13.64□□□□□ -0.23
NUMB-208ENST00000554014 NEURL4Q96JN8 1562 aa13.64□□□□□ -0.23
NUMB-208ENST00000554014 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
NUMB-208ENST00000554014 IDI1Q13907 227 aa13.63□□□□□ -0.23
NUMB-208ENST00000554014 PPLO60437 1756 aa13.63□□□□□ -0.23
NUMB-208ENST00000554014 SPATA31E1Q6ZUB1 1445 aa13.62□□□□□ -0.23
NUMB-208ENST00000554014 POLR1AO95602 1720 aaPredicted RBP13.62□□□□□ -0.23
NUMB-208ENST00000554014 SLC52A1Q9NWF4 448 aa13.61□□□□□ -0.23
NUMB-208ENST00000554014 NEXMIFQ5QGS0 1516 aa13.6□□□□□ -0.23
NUMB-208ENST00000554014 SLIT1O75093 1534 aa13.6□□□□□ -0.23
NUMB-208ENST00000554014 STRCQ7RTU9 1775 aa13.59□□□□□ -0.23
NUMB-208ENST00000554014 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
NUMB-208ENST00000554014 ARHGAP23Q9P227 1491 aa13.58□□□□□ -0.23
NUMB-208ENST00000554014 SIN3AQ96ST3 1273 aa13.58□□□□□ -0.24
NUMB-208ENST00000554014 ZFYVE9O95405 1425 aa13.57□□□□□ -0.24
NUMB-208ENST00000554014 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
NUMB-208ENST00000554014 CLSPNQ9HAW4 1339 aa13.55□□□□□ -0.24
NUMB-208ENST00000554014 TMEM2Q9UHN6 1383 aa13.54□□□□□ -0.24
NUMB-208ENST00000554014 IQGAP1P46940 1657 aa13.54□□□□□ -0.24
NUMB-208ENST00000554014 CHGAP10645 457 aaKnown RBP13.54□□□□□ -0.24
NUMB-208ENST00000554014 NRXN3Q9Y4C0 1643 aa13.54□□□□□ -0.24
NUMB-208ENST00000554014 HSPA2P54652 639 aa13.53□□□□□ -0.24
NUMB-208ENST00000554014 RIMS2Q9UQ26 1411 aa13.53□□□□□ -0.24
NUMB-208ENST00000554014 SETD1AO15047 1707 aaKnown RBP13.52□□□□□ -0.24
NUMB-208ENST00000554014 SCAF11Q99590 1463 aaKnown RBP13.52□□□□□ -0.25
NUMB-208ENST00000554014 MYOM2P54296 1465 aa13.51□□□□□ -0.25
NUMB-208ENST00000554014 NEUROD1Q13562 356 aa13.51□□□□□ -0.25
NUMB-208ENST00000554014 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
NUMB-208ENST00000554014 RGL3Q3MIN7 710 aa13.5□□□□□ -0.25
NUMB-208ENST00000554014 THEMISQ8N1K5 641 aaPredicted RBP13.5□□□□□ -0.25
NUMB-208ENST00000554014 SETBP1Q9Y6X0 1596 aa13.49□□□□□ -0.25
NUMB-208ENST00000554014 NRXN1Q9ULB1 1477 aa13.49□□□□□ -0.25
NUMB-208ENST00000554014 LTKP29376 864 aa13.48□□□□□ -0.25
NUMB-208ENST00000554014 ZNF326Q5BKZ1 582 aaKnown RBP13.48□□□□□ -0.25
NUMB-208ENST00000554014 MED14O60244 1454 aa13.48□□□□□ -0.25
NUMB-208ENST00000554014 NUTM2DQ5VT03 806 aaPredicted RBP13.47□□□□□ -0.25
NUMB-208ENST00000554014 LAMC1P11047 1609 aa13.46□□□□□ -0.25
NUMB-208ENST00000554014 L3MBTL2Q969R5 705 aa13.46□□□□□ -0.25
NUMB-208ENST00000554014 PIK3C2GO75747 1445 aa13.46□□□□□ -0.26
NUMB-208ENST00000554014 RPGRIP1LQ68CZ1 1315 aa13.46□□□□□ -0.26
NUMB-208ENST00000554014 TRPM1Q7Z4N2 1603 aa13.45□□□□□ -0.26
NUMB-208ENST00000554014 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
NUMB-208ENST00000554014 KIAA1210Q9ULL0 1709 aa13.45□□□□□ -0.26
NUMB-208ENST00000554014 NCKAP5LQ9HCH0 1330 aa13.45□□□□□ -0.26
NUMB-208ENST00000554014 PLEKHG1Q9ULL1 1385 aa13.45□□□□□ -0.26
NUMB-208ENST00000554014 TXNDC2Q86VQ3 553 aa13.44□□□□□ -0.26
NUMB-208ENST00000554014 ADGRF5Q8IZF2 1346 aa13.44□□□□□ -0.26
NUMB-208ENST00000554014 ASXL1Q8IXJ9 1541 aa13.44□□□□□ -0.26
NUMB-208ENST00000554014 DIP2AQ14689 1571 aa13.44□□□□□ -0.26
NUMB-208ENST00000554014 NPHP4O75161 1426 aaPredicted RBP13.44□□□□□ -0.26
NUMB-208ENST00000554014 ALKQ9UM73 1620 aa13.44□□□□□ -0.26
NUMB-208ENST00000554014 ADAMTS13Q76LX8 1427 aa13.43□□□□□ -0.26
NUMB-208ENST00000554014 PRAG1Q86YV5 1406 aa13.43□□□□□ -0.26
NUMB-208ENST00000554014 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
NUMB-208ENST00000554014 ANKLE2Q86XL3 938 aa13.42□□□□□ -0.26
NUMB-208ENST00000554014 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
NUMB-208ENST00000554014 STRCP1A6NGW2 1772 aa13.42□□□□□ -0.26
NUMB-208ENST00000554014 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.42□□□□□ -0.26
NUMB-208ENST00000554014 EID1Q9Y6B2 187 aa13.42□□□□□ -0.26
NUMB-208ENST00000554014 CHD2O14647 1828 aaKnown RBP13.41□□□□□ -0.26
NUMB-208ENST00000554014 PPP1R15AO75807 674 aaPredicted RBP13.4□□□□□ -0.26
NUMB-208ENST00000554014 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
NUMB-208ENST00000554014 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
NUMB-208ENST00000554014 XRN1Q8IZH2 1706 aaKnown RBP13.4□□□□□ -0.27
NUMB-208ENST00000554014 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
NUMB-208ENST00000554014 ADGRB1O14514 1584 aa13.39□□□□□ -0.27
NUMB-208ENST00000554014 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
NUMB-208ENST00000554014 KNDC1Q76NI1 1749 aa13.38□□□□□ -0.27
NUMB-208ENST00000554014 NWD1Q149M9 1564 aa13.38□□□□□ -0.27
NUMB-208ENST00000554014 NBPF8Q3BBV2 869 aa13.38□□□□□ -0.27
NUMB-208ENST00000554014 HDGFP51858 240 aaKnown RBP13.37□□□□□ -0.27
NUMB-208ENST00000554014 RALGAPBQ86X10 1494 aa13.37□□□□□ -0.27
NUMB-208ENST00000554014 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
NUMB-208ENST00000554014 METP08581 1390 aa13.36□□□□□ -0.27
NUMB-208ENST00000554014 STAC3Q96MF2 364 aa13.36□□□□□ -0.27
NUMB-208ENST00000554014 SLC26A8Q96RN1 970 aa13.36□□□□□ -0.27
NUMB-208ENST00000554014 PTPRUQ92729 1446 aa13.35□□□□□ -0.27
NUMB-208ENST00000554014 ARHGEF28Q8N1W1 1705 aaKnown RBP13.35□□□□□ -0.27
NUMB-208ENST00000554014 CFAP70Q5T0N1 1121 aa13.34□□□□□ -0.27
NUMB-208ENST00000554014 C14orf93Q9H972 538 aaKnown RBP13.33□□□□□ -0.27
NUMB-208ENST00000554014 CPS1P31327 1500 aa13.33□□□□□ -0.28
NUMB-208ENST00000554014 XIRP1Q702N8 1843 aaKnown RBP13.33□□□□□ -0.28
NUMB-208ENST00000554014 BCANQ96GW7 911 aa13.32□□□□□ -0.28
NUMB-208ENST00000554014 TBX22Q9Y458 520 aa13.32□□□□□ -0.28
NUMB-208ENST00000554014 CAPN15O75808 1086 aa13.3□□□□□ -0.28
NUMB-208ENST00000554014 NBPF1Q3BBV0 1214 aa13.3□□□□□ -0.28
NUMB-208ENST00000554014 GPRASP1Q5JY77 1395 aa13.3□□□□□ -0.28
NUMB-208ENST00000554014 PIK3R4Q99570 1358 aa13.3□□□□□ -0.28
NUMB-208ENST00000554014 YTHDC2Q9H6S0 1430 aaKnown RBP13.3□□□□□ -0.28
NUMB-208ENST00000554014 LTBP4Q8N2S1 1624 aa13.3□□□□□ -0.28
NUMB-208ENST00000554014 TMEM132EQ6IEE7 984 aa13.3□□□□□ -0.28
NUMB-208ENST00000554014 TECPR2O15040 1411 aa13.29□□□□□ -0.28
NUMB-208ENST00000554014 NKTRP30414 1462 aaKnown RBP13.29□□□□□ -0.28
NUMB-208ENST00000554014 NALCNQ8IZF0 1738 aa13.29□□□□□ -0.28
NUMB-208ENST00000554014 ZNF335Q9H4Z2 1342 aaPredicted RBP13.29□□□□□ -0.28
NUMB-208ENST00000554014 ROCK2O75116 1388 aaKnown RBP13.28□□□□□ -0.28
NUMB-208ENST00000554014 DLC1Q96QB1 1528 aa13.28□□□□□ -0.28
NUMB-208ENST00000554014 QRICH2Q9H0J4 1663 aa13.28□□□□□ -0.28
NUMB-208ENST00000554014 LRPPRCP42704 1394 aaKnown RBP13.28□□□□□ -0.28
NUMB-208ENST00000554014 PTCH1Q13635 1447 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms