RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 KDM4FA0A1W2PPD8 638 aa20.79■□□□□ 0.92
SHMT2-210ENST00000553950 PLPPR3Q6T4P5 718 aa20.79■□□□□ 0.92
SHMT2-210ENST00000553950 ZFYVE9O95405 1425 aa20.78■□□□□ 0.92
SHMT2-210ENST00000553950 NRXN1Q9ULB1 1477 aa20.77■□□□□ 0.92
SHMT2-210ENST00000553950 RGL3Q3MIN7 710 aa20.77■□□□□ 0.92
SHMT2-210ENST00000553950 POLR1AO95602 1720 aaPredicted RBP20.77■□□□□ 0.92
SHMT2-210ENST00000553950 TRPM1Q7Z4N2 1603 aa20.77■□□□□ 0.92
SHMT2-210ENST00000553950 PRAG1Q86YV5 1406 aa20.77■□□□□ 0.91
SHMT2-210ENST00000553950 ARHGAP23Q9P227 1491 aa20.76■□□□□ 0.91
SHMT2-210ENST00000553950 HDGFP51858 240 aaKnown RBP20.76■□□□□ 0.91
SHMT2-210ENST00000553950 DCAF11Q8TEB1 546 aa20.75■□□□□ 0.91
SHMT2-210ENST00000553950 RIMS2Q9UQ26 1411 aa20.75■□□□□ 0.91
SHMT2-210ENST00000553950 RALGAPBQ86X10 1494 aa20.75■□□□□ 0.91
SHMT2-210ENST00000553950 TMEM2Q9UHN6 1383 aa20.74■□□□□ 0.91
SHMT2-210ENST00000553950 THEMISQ8N1K5 641 aaPredicted RBP20.74■□□□□ 0.91
SHMT2-210ENST00000553950 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.74■□□□□ 0.91
SHMT2-210ENST00000553950 PPP1R15AO75807 674 aaPredicted RBP20.73■□□□□ 0.91
SHMT2-210ENST00000553950 VGFO15240 615 aaPredicted RBP20.72■□□□□ 0.91
SHMT2-210ENST00000553950 PIK3C2GO75747 1445 aa20.71■□□□□ 0.91
SHMT2-210ENST00000553950 SETBP1Q9Y6X0 1596 aa20.71■□□□□ 0.91
SHMT2-210ENST00000553950 SCAF11Q99590 1463 aaKnown RBP20.69■□□□□ 0.9
SHMT2-210ENST00000553950 DIP2AQ14689 1571 aa20.69■□□□□ 0.9
SHMT2-210ENST00000553950 IQGAP1P46940 1657 aa20.67■□□□□ 0.9
SHMT2-210ENST00000553950 KDM2AQ9Y2K7 1162 aa20.67■□□□□ 0.9
SHMT2-210ENST00000553950 EID1Q9Y6B2 187 aa20.67■□□□□ 0.9
SHMT2-210ENST00000553950 LMTK3Q96Q04 1460 aa20.65■□□□□ 0.9
SHMT2-210ENST00000553950 SETD1AO15047 1707 aaKnown RBP20.64■□□□□ 0.9
SHMT2-210ENST00000553950 NRXN3Q9Y4C0 1643 aa20.64■□□□□ 0.9
SHMT2-210ENST00000553950 PLEKHG1Q9ULL1 1385 aa20.64■□□□□ 0.89
SHMT2-210ENST00000553950 ROCK2O75116 1388 aaKnown RBP20.62■□□□□ 0.89
SHMT2-210ENST00000553950 GPRASP1Q5JY77 1395 aa20.61■□□□□ 0.89
SHMT2-210ENST00000553950 ALKQ9UM73 1620 aa20.61■□□□□ 0.89
SHMT2-210ENST00000553950 ADGRF5Q8IZF2 1346 aa20.61■□□□□ 0.89
SHMT2-210ENST00000553950 MED14O60244 1454 aa20.59■□□□□ 0.89
SHMT2-210ENST00000553950 NBPF8Q3BBV2 869 aa20.59■□□□□ 0.89
SHMT2-210ENST00000553950 TXNDC2Q86VQ3 553 aa20.58■□□□□ 0.89
SHMT2-210ENST00000553950 ANKLE2Q86XL3 938 aa20.58■□□□□ 0.89
SHMT2-210ENST00000553950 KNDC1Q76NI1 1749 aa20.58■□□□□ 0.88
SHMT2-210ENST00000553950 ADGRB1O14514 1584 aa20.56■□□□□ 0.88
SHMT2-210ENST00000553950 EIF3AQ14152 1382 aaKnown RBP20.55■□□□□ 0.88
SHMT2-210ENST00000553950 C14orf93Q9H972 538 aaKnown RBP20.54■□□□□ 0.88
SHMT2-210ENST00000553950 NPHP4O75161 1426 aaPredicted RBP20.53■□□□□ 0.88
SHMT2-210ENST00000553950 ASXL1Q8IXJ9 1541 aa20.53■□□□□ 0.88
SHMT2-210ENST00000553950 NUTM2DQ5VT03 806 aaPredicted RBP20.53■□□□□ 0.88
SHMT2-210ENST00000553950 ARHGEF28Q8N1W1 1705 aaKnown RBP20.53■□□□□ 0.88
SHMT2-210ENST00000553950 CARD11Q9BXL7 1154 aa20.52■□□□□ 0.88
SHMT2-210ENST00000553950 LTKP29376 864 aa20.51■□□□□ 0.87
SHMT2-210ENST00000553950 ADAMTS13Q76LX8 1427 aa20.51■□□□□ 0.87
SHMT2-210ENST00000553950 PIK3R4Q99570 1358 aa20.5■□□□□ 0.87
SHMT2-210ENST00000553950 STRCQ7RTU9 1775 aa20.5■□□□□ 0.87
SHMT2-210ENST00000553950 BCANQ96GW7 911 aa20.5■□□□□ 0.87
SHMT2-210ENST00000553950 USP47Q96K76 1375 aa20.49■□□□□ 0.87
SHMT2-210ENST00000553950 DLC1Q96QB1 1528 aa20.49■□□□□ 0.87
SHMT2-210ENST00000553950 CFAP70Q5T0N1 1121 aa20.49■□□□□ 0.87
SHMT2-210ENST00000553950 CPS1P31327 1500 aa20.48■□□□□ 0.87
SHMT2-210ENST00000553950 EIF4G2P78344 907 aaKnown RBP eCLIP20.47■□□□□ 0.87
SHMT2-210ENST00000553950 XRN1Q8IZH2 1706 aaKnown RBP20.47■□□□□ 0.87
SHMT2-210ENST00000553950 CHD2O14647 1828 aaKnown RBP20.46■□□□□ 0.87
SHMT2-210ENST00000553950 YTHDC2Q9H6S0 1430 aaKnown RBP20.46■□□□□ 0.87
SHMT2-210ENST00000553950 QRICH2Q9H0J4 1663 aa20.45■□□□□ 0.86
SHMT2-210ENST00000553950 TBX22Q9Y458 520 aa20.45■□□□□ 0.86
SHMT2-210ENST00000553950 NWD1Q149M9 1564 aa20.45■□□□□ 0.86
SHMT2-210ENST00000553950 TECPR2O15040 1411 aa20.44■□□□□ 0.86
SHMT2-210ENST00000553950 NBPF1Q3BBV0 1214 aa20.44■□□□□ 0.86
SHMT2-210ENST00000553950 LRPPRCP42704 1394 aaKnown RBP20.44■□□□□ 0.86
SHMT2-210ENST00000553950 PTCH1Q13635 1447 aa20.42■□□□□ 0.86
SHMT2-210ENST00000553950 SLC24A1O60721 1099 aa20.4■□□□□ 0.86
SHMT2-210ENST00000553950 METP08581 1390 aa20.4■□□□□ 0.86
SHMT2-210ENST00000553950 HSPA2P54652 639 aa20.4■□□□□ 0.86
SHMT2-210ENST00000553950 ABCC11Q96J66 1382 aa20.4■□□□□ 0.86
SHMT2-210ENST00000553950 SBNO2Q9Y2G9 1366 aa20.39■□□□□ 0.85
SHMT2-210ENST00000553950 NCKAP5LQ9HCH0 1330 aa20.39■□□□□ 0.85
SHMT2-210ENST00000553950 NKTRP30414 1462 aaKnown RBP20.38■□□□□ 0.85
SHMT2-210ENST00000553950 FAM135BQ49AJ0 1406 aa20.38■□□□□ 0.85
SHMT2-210ENST00000553950 DMRT2Q9Y5R5 561 aa20.37■□□□□ 0.85
SHMT2-210ENST00000553950 HSPA5P11021 654 aaKnown RBP20.36■□□□□ 0.85
SHMT2-210ENST00000553950 TMEM132EQ6IEE7 984 aa20.36■□□□□ 0.85
SHMT2-210ENST00000553950 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
SHMT2-210ENST00000553950 SLC26A8Q96RN1 970 aa20.36■□□□□ 0.85
SHMT2-210ENST00000553950 CENPJQ9HC77 1338 aaPredicted RBP20.34■□□□□ 0.85
SHMT2-210ENST00000553950 ADGRB2O60241 1585 aa20.34■□□□□ 0.85
SHMT2-210ENST00000553950 SIRT1Q96EB6 747 aa20.33■□□□□ 0.85
SHMT2-210ENST00000553950 SENP3Q9H4L4 574 aaPredicted RBP20.32■□□□□ 0.84
SHMT2-210ENST00000553950 TRAK1Q9UPV9 953 aa20.32■□□□□ 0.84
SHMT2-210ENST00000553950 PTPRUQ92729 1446 aa20.32■□□□□ 0.84
SHMT2-210ENST00000553950 ST20-MTHFSA0A0A6YYL1 179 aa20.29■□□□□ 0.84
SHMT2-210ENST00000553950 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
SHMT2-210ENST00000553950 STK26Q9P289 416 aa20.29■□□□□ 0.84
SHMT2-210ENST00000553950 POGKQ9P215 609 aa20.28■□□□□ 0.84
SHMT2-210ENST00000553950 AMOTL2Q9Y2J4 779 aa20.28■□□□□ 0.84
SHMT2-210ENST00000553950 KCNA6P17658 529 aa20.27■□□□□ 0.84
SHMT2-210ENST00000553950 STRCP1A6NGW2 1772 aa20.26■□□□□ 0.83
SHMT2-210ENST00000553950 ROBO2Q9HCK4 1378 aa20.26■□□□□ 0.83
SHMT2-210ENST00000553950 TMF1P82094 1093 aa20.26■□□□□ 0.83
SHMT2-210ENST00000553950 CDCA8Q53HL2 280 aa20.26■□□□□ 0.83
SHMT2-210ENST00000553950 NALCNQ8IZF0 1738 aa20.25■□□□□ 0.83
SHMT2-210ENST00000553950 PRAM1Q96QH2 718 aa20.25■□□□□ 0.83
SHMT2-210ENST00000553950 CDC42BPGQ6DT37 1551 aa20.25■□□□□ 0.83
SHMT2-210ENST00000553950 TESK2Q96S53 571 aa20.23■□□□□ 0.83
SHMT2-210ENST00000553950 NCOA3Q9Y6Q9 1424 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms