RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 EID1Q9Y6B2 187 aa19.7■□□□□ 0.74
PSMC6-205ENST00000553899 NEXMIFQ5QGS0 1516 aa19.7■□□□□ 0.74
PSMC6-205ENST00000553899 PPLO60437 1756 aa19.7■□□□□ 0.74
PSMC6-205ENST00000553899 VGFO15240 615 aaPredicted RBP19.69■□□□□ 0.74
PSMC6-205ENST00000553899 ANKLE2Q86XL3 938 aa19.69■□□□□ 0.74
PSMC6-205ENST00000553899 SIN3AQ96ST3 1273 aa19.69■□□□□ 0.74
PSMC6-205ENST00000553899 RIMS2Q9UQ26 1411 aa19.68■□□□□ 0.74
PSMC6-205ENST00000553899 MED14O60244 1454 aa19.68■□□□□ 0.74
PSMC6-205ENST00000553899 CHGAP10645 457 aaKnown RBP19.68■□□□□ 0.74
PSMC6-205ENST00000553899 MYOM2P54296 1465 aa19.67■□□□□ 0.74
PSMC6-205ENST00000553899 ZNF326Q5BKZ1 582 aaKnown RBP19.67■□□□□ 0.74
PSMC6-205ENST00000553899 POLR1AO95602 1720 aaPredicted RBP19.67■□□□□ 0.74
PSMC6-205ENST00000553899 SCAF11Q99590 1463 aaKnown RBP19.67■□□□□ 0.74
PSMC6-205ENST00000553899 NEUROD1Q13562 356 aa19.64■□□□□ 0.73
PSMC6-205ENST00000553899 RGL3Q3MIN7 710 aa19.64■□□□□ 0.73
PSMC6-205ENST00000553899 TXNDC2Q86VQ3 553 aa19.64■□□□□ 0.73
PSMC6-205ENST00000553899 NRXN1Q9ULB1 1477 aa19.64■□□□□ 0.73
PSMC6-205ENST00000553899 TONSLQ96HA7 1378 aa19.63■□□□□ 0.73
PSMC6-205ENST00000553899 PLEKHG1Q9ULL1 1385 aa19.63■□□□□ 0.73
PSMC6-205ENST00000553899 STRCQ7RTU9 1775 aa19.62■□□□□ 0.73
PSMC6-205ENST00000553899 LTKP29376 864 aa19.62■□□□□ 0.73
PSMC6-205ENST00000553899 L3MBTL2Q969R5 705 aa19.62■□□□□ 0.73
PSMC6-205ENST00000553899 DMRT2Q9Y5R5 561 aa19.62■□□□□ 0.73
PSMC6-205ENST00000553899 SETBP1Q9Y6X0 1596 aa19.61■□□□□ 0.73
PSMC6-205ENST00000553899 DCAF11Q8TEB1 546 aa19.6■□□□□ 0.73
PSMC6-205ENST00000553899 HSPA2P54652 639 aa19.59■□□□□ 0.73
PSMC6-205ENST00000553899 DIP2AQ14689 1571 aa19.58■□□□□ 0.73
PSMC6-205ENST00000553899 PPP1R15AO75807 674 aaPredicted RBP19.58■□□□□ 0.72
PSMC6-205ENST00000553899 PIK3C2GO75747 1445 aa19.58■□□□□ 0.72
PSMC6-205ENST00000553899 IQGAP1P46940 1657 aa19.57■□□□□ 0.72
PSMC6-205ENST00000553899 LAMC1P11047 1609 aa19.57■□□□□ 0.72
PSMC6-205ENST00000553899 NPHP4O75161 1426 aaPredicted RBP19.57■□□□□ 0.72
PSMC6-205ENST00000553899 KIAA1210Q9ULL0 1709 aa19.56■□□□□ 0.72
PSMC6-205ENST00000553899 TBX22Q9Y458 520 aa19.55■□□□□ 0.72
PSMC6-205ENST00000553899 PIK3R4Q99570 1358 aa19.54■□□□□ 0.72
PSMC6-205ENST00000553899 ADGRF5Q8IZF2 1346 aa19.53■□□□□ 0.72
PSMC6-205ENST00000553899 NCKAP5LQ9HCH0 1330 aa19.53■□□□□ 0.72
PSMC6-205ENST00000553899 PRAG1Q86YV5 1406 aa19.53■□□□□ 0.72
PSMC6-205ENST00000553899 NRXN3Q9Y4C0 1643 aa19.53■□□□□ 0.72
PSMC6-205ENST00000553899 C14orf93Q9H972 538 aaKnown RBP19.52■□□□□ 0.72
PSMC6-205ENST00000553899 ADAMTS13Q76LX8 1427 aa19.51■□□□□ 0.71
PSMC6-205ENST00000553899 KDM2AQ9Y2K7 1162 aa19.5■□□□□ 0.71
PSMC6-205ENST00000553899 ALKQ9UM73 1620 aa19.5■□□□□ 0.71
PSMC6-205ENST00000553899 SETD1AO15047 1707 aaKnown RBP19.49■□□□□ 0.71
PSMC6-205ENST00000553899 ZEB1P37275 1124 aaPredicted RBP19.48■□□□□ 0.71
PSMC6-205ENST00000553899 NUTM2DQ5VT03 806 aaPredicted RBP19.47■□□□□ 0.71
PSMC6-205ENST00000553899 TRPM1Q7Z4N2 1603 aa19.45■□□□□ 0.7
PSMC6-205ENST00000553899 BCANQ96GW7 911 aa19.44■□□□□ 0.7
PSMC6-205ENST00000553899 CHD2O14647 1828 aaKnown RBP19.44■□□□□ 0.7
PSMC6-205ENST00000553899 GPRASP1Q5JY77 1395 aa19.43■□□□□ 0.7
PSMC6-205ENST00000553899 RALGAPBQ86X10 1494 aa19.42■□□□□ 0.7
PSMC6-205ENST00000553899 ADGRB1O14514 1584 aa19.42■□□□□ 0.7
PSMC6-205ENST00000553899 SLC26A8Q96RN1 970 aa19.42■□□□□ 0.7
PSMC6-205ENST00000553899 NBPF8Q3BBV2 869 aa19.41■□□□□ 0.7
PSMC6-205ENST00000553899 CFAP70Q5T0N1 1121 aa19.41■□□□□ 0.7
PSMC6-205ENST00000553899 NWD1Q149M9 1564 aa19.4■□□□□ 0.7
PSMC6-205ENST00000553899 SIRT1Q96EB6 747 aa19.4■□□□□ 0.7
PSMC6-205ENST00000553899 METP08581 1390 aa19.4■□□□□ 0.7
PSMC6-205ENST00000553899 TECPR2O15040 1411 aa19.4■□□□□ 0.7
PSMC6-205ENST00000553899 KCNA6P17658 529 aa19.39■□□□□ 0.69
PSMC6-205ENST00000553899 ABCC11Q96J66 1382 aa19.39■□□□□ 0.69
PSMC6-205ENST00000553899 LRPPRCP42704 1394 aaKnown RBP19.38■□□□□ 0.69
PSMC6-205ENST00000553899 KNDC1Q76NI1 1749 aa19.37■□□□□ 0.69
PSMC6-205ENST00000553899 XRN1Q8IZH2 1706 aaKnown RBP19.37■□□□□ 0.69
PSMC6-205ENST00000553899 ASXL1Q8IXJ9 1541 aa19.37■□□□□ 0.69
PSMC6-205ENST00000553899 NKTRP30414 1462 aaKnown RBP19.37■□□□□ 0.69
PSMC6-205ENST00000553899 YTHDC2Q9H6S0 1430 aaKnown RBP19.36■□□□□ 0.69
PSMC6-205ENST00000553899 DLC1Q96QB1 1528 aa19.35■□□□□ 0.69
PSMC6-205ENST00000553899 PTCH1Q13635 1447 aa19.35■□□□□ 0.69
PSMC6-205ENST00000553899 ROCK2O75116 1388 aaKnown RBP19.35■□□□□ 0.69
PSMC6-205ENST00000553899 CPS1P31327 1500 aa19.35■□□□□ 0.69
PSMC6-205ENST00000553899 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
PSMC6-205ENST00000553899 NCOA3Q9Y6Q9 1424 aa19.34■□□□□ 0.69
PSMC6-205ENST00000553899 NBPF1Q3BBV0 1214 aa19.33■□□□□ 0.68
PSMC6-205ENST00000553899 AMOTL2Q9Y2J4 779 aa19.33■□□□□ 0.68
PSMC6-205ENST00000553899 PTPRUQ92729 1446 aa19.33■□□□□ 0.68
PSMC6-205ENST00000553899 TMEM132EQ6IEE7 984 aa19.31■□□□□ 0.68
PSMC6-205ENST00000553899 STRCP1A6NGW2 1772 aa19.29■□□□□ 0.68
PSMC6-205ENST00000553899 SLC24A1O60721 1099 aa19.29■□□□□ 0.68
PSMC6-205ENST00000553899 CARD11Q9BXL7 1154 aa19.29■□□□□ 0.68
PSMC6-205ENST00000553899 EIF3AQ14152 1382 aaKnown RBP19.29■□□□□ 0.68
PSMC6-205ENST00000553899 LTBP4Q8N2S1 1624 aa19.28■□□□□ 0.68
PSMC6-205ENST00000553899 ARHGEF28Q8N1W1 1705 aaKnown RBP19.27■□□□□ 0.68
PSMC6-205ENST00000553899 ZNF335Q9H4Z2 1342 aaPredicted RBP19.26■□□□□ 0.67
PSMC6-205ENST00000553899 SBNO2Q9Y2G9 1366 aa19.25■□□□□ 0.67
PSMC6-205ENST00000553899 IQSEC2Q5JU85 1478 aa19.24■□□□□ 0.67
PSMC6-205ENST00000553899 ROBO2Q9HCK4 1378 aa19.24■□□□□ 0.67
PSMC6-205ENST00000553899 LRRC7Q96NW7 1537 aa19.24■□□□□ 0.67
PSMC6-205ENST00000553899 TRAK1Q9UPV9 953 aa19.23■□□□□ 0.67
PSMC6-205ENST00000553899 PROSER2Q86WR7 435 aaPredicted RBP19.22■□□□□ 0.67
PSMC6-205ENST00000553899 STK26Q9P289 416 aa19.22■□□□□ 0.67
PSMC6-205ENST00000553899 USP47Q96K76 1375 aa19.2■□□□□ 0.66
PSMC6-205ENST00000553899 DCCP43146 1447 aa19.2■□□□□ 0.66
PSMC6-205ENST00000553899 CENPJQ9HC77 1338 aaPredicted RBP19.2■□□□□ 0.66
PSMC6-205ENST00000553899 XIRP1Q702N8 1843 aaKnown RBP19.19■□□□□ 0.66
PSMC6-205ENST00000553899 EIF4G2P78344 907 aaKnown RBP eCLIP19.19■□□□□ 0.66
PSMC6-205ENST00000553899 PRAM1Q96QH2 718 aa19.19■□□□□ 0.66
PSMC6-205ENST00000553899 POGKQ9P215 609 aa19.19■□□□□ 0.66
PSMC6-205ENST00000553899 ADGRB2O60241 1585 aa19.19■□□□□ 0.66
PSMC6-205ENST00000553899 TMEM94Q12767 1356 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms