RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 MYO5BQ9ULV0 1848 aa14.57□□□□□ -0.08
PRKCH-208ENST00000553846 PROSER2Q86WR7 435 aaPredicted RBP14.56□□□□□ -0.08
PRKCH-208ENST00000553846 UPF1Q92900 1129 aaKnown RBP eCLIP14.56□□□□□ -0.08
PRKCH-208ENST00000553846 SLAIN2Q9P270 581 aa14.56□□□□□ -0.08
PRKCH-208ENST00000553846 DAPK1P53355 1430 aa14.55□□□□□ -0.08
PRKCH-208ENST00000553846 PTPN23Q9H3S7 1636 aa14.55□□□□□ -0.08
PRKCH-208ENST00000553846 PLEKHG1Q9ULL1 1385 aa14.54□□□□□ -0.08
PRKCH-208ENST00000553846 NCOA3Q9Y6Q9 1424 aa14.54□□□□□ -0.08
PRKCH-208ENST00000553846 CDK12Q9NYV4 1490 aaPredicted RBP14.54□□□□□ -0.08
PRKCH-208ENST00000553846 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.53□□□□□ -0.08
PRKCH-208ENST00000553846 TMEM131LA2VDJ0 1609 aa14.53□□□□□ -0.08
PRKCH-208ENST00000553846 SPATA31A6Q5VVP1 1343 aa14.53□□□□□ -0.08
PRKCH-208ENST00000553846 GCC2Q8IWJ2 1684 aa14.52□□□□□ -0.08
PRKCH-208ENST00000553846 RPRD2Q5VT52 1461 aaKnown RBP14.52□□□□□ -0.08
PRKCH-208ENST00000553846 ADAMTS13Q76LX8 1427 aa14.51□□□□□ -0.09
PRKCH-208ENST00000553846 RRP7BPQ9NSQ0 103 aa14.51□□□□□ -0.09
PRKCH-208ENST00000553846 KANK1Q14678 1352 aa14.5□□□□□ -0.09
PRKCH-208ENST00000553846 ADGRL2O95490 1459 aa14.5□□□□□ -0.09
PRKCH-208ENST00000553846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.48□□□□□ -0.09
PRKCH-208ENST00000553846 SLC52A1Q9NWF4 448 aa14.48□□□□□ -0.09
PRKCH-208ENST00000553846 STAG3Q9UJ98 1225 aa14.48□□□□□ -0.09
PRKCH-208ENST00000553846 RIMS2Q9UQ26 1411 aa14.48□□□□□ -0.09
PRKCH-208ENST00000553846 EP400Q96L91 3159 aa14.48□□□□□ -0.09
PRKCH-208ENST00000553846 ZNF772Q68DY9 489 aaPredicted RBP14.47□□□□□ -0.09
PRKCH-208ENST00000553846 NHSL1Q5SYE7 1610 aa14.47□□□□□ -0.09
PRKCH-208ENST00000553846 XRN1Q8IZH2 1706 aaKnown RBP14.45□□□□□ -0.1
PRKCH-208ENST00000553846 TBX22Q9Y458 520 aa14.45□□□□□ -0.1
PRKCH-208ENST00000553846 ANKRD30AQ9BXX3 1397 aa14.45□□□□□ -0.1
PRKCH-208ENST00000553846 RGS12O14924 1447 aa14.44□□□□□ -0.1
PRKCH-208ENST00000553846 PTPRUQ92729 1446 aa14.44□□□□□ -0.1
PRKCH-208ENST00000553846 TRIM52Q96A61 297 aa14.44□□□□□ -0.1
PRKCH-208ENST00000553846 ASXL1Q8IXJ9 1541 aa14.44□□□□□ -0.1
PRKCH-208ENST00000553846 PIK3R4Q99570 1358 aa14.44□□□□□ -0.1
PRKCH-208ENST00000553846 NRXN3Q9Y4C0 1643 aa14.44□□□□□ -0.1
PRKCH-208ENST00000553846 DCCP43146 1447 aa14.43□□□□□ -0.1
PRKCH-208ENST00000553846 SETD5Q9C0A6 1442 aa14.43□□□□□ -0.1
PRKCH-208ENST00000553846 UNC13BO14795 1591 aa14.43□□□□□ -0.1
PRKCH-208ENST00000553846 BRINP3Q76B58 766 aa14.42□□□□□ -0.1
PRKCH-208ENST00000553846 C19orf44Q9H6X5 657 aa14.41□□□□□ -0.1
PRKCH-208ENST00000553846 E9PCH4 1651 aa14.41□□□□□ -0.1
PRKCH-208ENST00000553846 TRPM2O94759 1503 aa14.41□□□□□ -0.1
PRKCH-208ENST00000553846 RXRBP28702 533 aa14.4□□□□□ -0.1
PRKCH-208ENST00000553846 CADPS2Q86UW7 1296 aa14.4□□□□□ -0.1
PRKCH-208ENST00000553846 MST1RQ04912 1400 aa14.4□□□□□ -0.1
PRKCH-208ENST00000553846 LAMC1P11047 1609 aa14.39□□□□□ -0.11
PRKCH-208ENST00000553846 MEX3CQ5U5Q3 659 aaKnown RBP14.38□□□□□ -0.11
PRKCH-208ENST00000553846 ANKRD50Q9ULJ7 1429 aa14.38□□□□□ -0.11
PRKCH-208ENST00000553846 SETBP1Q9Y6X0 1596 aa14.38□□□□□ -0.11
PRKCH-208ENST00000553846 AFF2P51816 1311 aa14.38□□□□□ -0.11
PRKCH-208ENST00000553846 CHIC2Q9UKJ5 165 aa14.36□□□□□ -0.11
PRKCH-208ENST00000553846 IQGAP3Q86VI3 1631 aa14.36□□□□□ -0.11
PRKCH-208ENST00000553846 PNPLA6Q8IY17 1366 aa14.35□□□□□ -0.11
PRKCH-208ENST00000553846 NALCNQ8IZF0 1738 aa14.35□□□□□ -0.11
PRKCH-208ENST00000553846 PPP1R15AO75807 674 aaPredicted RBP14.34□□□□□ -0.11
PRKCH-208ENST00000553846 ATF3P18847 181 aa14.34□□□□□ -0.11
PRKCH-208ENST00000553846 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRKCH-208ENST00000553846 BCANQ96GW7 911 aa14.34□□□□□ -0.11
PRKCH-208ENST00000553846 ADGRL3Q9HAR2 1447 aa14.32□□□□□ -0.12
PRKCH-208ENST00000553846 NUTM2BA6NNL0 878 aaPredicted RBP14.31□□□□□ -0.12
PRKCH-208ENST00000553846 NUTM2EB1AL46 878 aaPredicted RBP14.31□□□□□ -0.12
PRKCH-208ENST00000553846 HDGFP51858 240 aaKnown RBP14.31□□□□□ -0.12
PRKCH-208ENST00000553846 NUTM2AQ8IVF1 878 aaPredicted RBP14.31□□□□□ -0.12
PRKCH-208ENST00000553846 AMOTL2Q9Y2J4 779 aa14.31□□□□□ -0.12
PRKCH-208ENST00000553846 RBM6P78332 1123 aaKnown RBP14.3□□□□□ -0.12
PRKCH-208ENST00000553846 NUTM2DQ5VT03 806 aaPredicted RBP14.3□□□□□ -0.12
PRKCH-208ENST00000553846 C14orf37Q86TY3 774 aa14.3□□□□□ -0.12
PRKCH-208ENST00000553846 LOC105371045A0A1W2PR82 267 aa14.28□□□□□ -0.12
PRKCH-208ENST00000553846 METP08581 1390 aa14.28□□□□□ -0.12
PRKCH-208ENST00000553846 COL22A1Q8NFW1 1626 aaPredicted RBP14.28□□□□□ -0.12
PRKCH-208ENST00000553846 QTRT2Q9H974 415 aaKnown RBP14.27□□□□□ -0.13
PRKCH-208ENST00000553846 PRAG1Q86YV5 1406 aa14.26□□□□□ -0.13
PRKCH-208ENST00000553846 ATAD2Q6PL18 1390 aa14.26□□□□□ -0.13
PRKCH-208ENST00000553846 DDX17Q92841 729 aaKnown RBP14.26□□□□□ -0.13
PRKCH-208ENST00000553846 LRRC59Q96AG4 307 aaKnown RBP14.26□□□□□ -0.13
PRKCH-208ENST00000553846 C8orf37Q96NL8 207 aa14.26□□□□□ -0.13
PRKCH-208ENST00000553846 ATRNO75882 1429 aa14.25□□□□□ -0.13
PRKCH-208ENST00000553846 SPHKAPQ2M3C7 1700 aa14.25□□□□□ -0.13
PRKCH-208ENST00000553846 NEXMIFQ5QGS0 1516 aa14.25□□□□□ -0.13
PRKCH-208ENST00000553846 C1orf167Q5SNV9 1468 aa14.25□□□□□ -0.13
PRKCH-208ENST00000553846 ROCK1Q13464 1354 aa14.23□□□□□ -0.13
PRKCH-208ENST00000553846 SOS2Q07890 1332 aaPredicted RBP14.23□□□□□ -0.13
PRKCH-208ENST00000553846 MYOM2P54296 1465 aa14.23□□□□□ -0.13
PRKCH-208ENST00000553846 PTCH1Q13635 1447 aa14.23□□□□□ -0.13
PRKCH-208ENST00000553846 CHGAP10645 457 aaKnown RBP14.22□□□□□ -0.13
PRKCH-208ENST00000553846 FNBP4Q8N3X1 1017 aaPredicted RBP14.22□□□□□ -0.13
PRKCH-208ENST00000553846 MARF1Q9Y4F3 1742 aaKnown RBP14.21□□□□□ -0.14
PRKCH-208ENST00000553846 BCL9LQ86UU0 1499 aa14.2□□□□□ -0.14
PRKCH-208ENST00000553846 CLTCL1P53675 1640 aa14.2□□□□□ -0.14
PRKCH-208ENST00000553846 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.18□□□□□ -0.14
PRKCH-208ENST00000553846 ADAMTS2O95450 1211 aa14.18□□□□□ -0.14
PRKCH-208ENST00000553846 NGLY1Q96IV0 654 aa14.18□□□□□ -0.14
PRKCH-208ENST00000553846 ROBO2Q9HCK4 1378 aa14.17□□□□□ -0.14
PRKCH-208ENST00000553846 PXDNQ92626 1479 aa14.17□□□□□ -0.14
PRKCH-208ENST00000553846 LRP5O75197 1615 aa14.16□□□□□ -0.14
PRKCH-208ENST00000553846 FAM50AQ14320 339 aaKnown RBP14.16□□□□□ -0.14
PRKCH-208ENST00000553846 USP21Q9UK80 565 aa14.16□□□□□ -0.14
PRKCH-208ENST00000553846 TRPC5Q9UL62 973 aaPredicted RBP14.16□□□□□ -0.14
PRKCH-208ENST00000553846 GLI3P10071 1580 aa14.16□□□□□ -0.14
PRKCH-208ENST00000553846 CDC42BPGQ6DT37 1551 aa14.15□□□□□ -0.14
PRKCH-208ENST00000553846 NUP155O75694 1391 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms