RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 DNAJB2P25686 324 aa9.03□□□□□ -0.96
ATXN3-222ENST00000553570 PHOX2BQ99453 314 aa9.03□□□□□ -0.96
ATXN3-222ENST00000553570 TMEM134Q9H6X4 195 aa9.03□□□□□ -0.96
ATXN3-222ENST00000553570 NYAP1Q6ZVC0 841 aa9.02□□□□□ -0.97
ATXN3-222ENST00000553570 PLA2G2EQ9NZK7 142 aa9.02□□□□□ -0.97
ATXN3-222ENST00000553570 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9□□□□□ -0.97
ATXN3-222ENST00000553570 PPP4CP60510 307 aa9□□□□□ -0.97
ATXN3-222ENST00000553570 HDGFP51858 240 aaKnown RBP8.99□□□□□ -0.97
ATXN3-222ENST00000553570 IFFO2Q5TF58 517 aa8.99□□□□□ -0.97
ATXN3-222ENST00000553570 ITGBL1O95965 494 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-222ENST00000553570 MAP2K5Q13163 448 aa8.98□□□□□ -0.97
ATXN3-222ENST00000553570 SLF2Q8IX21 1173 aa8.98□□□□□ -0.97
ATXN3-222ENST00000553570 IRF6O14896 467 aa8.97□□□□□ -0.97
ATXN3-222ENST00000553570 APLP1P51693 650 aa8.97□□□□□ -0.97
ATXN3-222ENST00000553570 ZC3H15Q8WU90 426 aaKnown RBP8.97□□□□□ -0.97
ATXN3-222ENST00000553570 ZMYND10O75800 440 aa8.96□□□□□ -0.98
ATXN3-222ENST00000553570 SLC10A3P09131 477 aa8.96□□□□□ -0.98
ATXN3-222ENST00000553570 MINK1Q8N4C8 1332 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-222ENST00000553570 BARGINQ6ZT62 677 aa8.95□□□□□ -0.98
ATXN3-222ENST00000553570 NLRP7Q8WX94 980 aa8.95□□□□□ -0.98
ATXN3-222ENST00000553570 MYO15BQ96JP2 1530 aa8.95□□□□□ -0.98
ATXN3-222ENST00000553570 SCRIBQ14160 1630 aa8.94□□□□□ -0.98
ATXN3-222ENST00000553570 RNF40O75150 1001 aa8.94□□□□□ -0.98
ATXN3-222ENST00000553570 DCAF1Q9Y4B6 1507 aa8.94□□□□□ -0.98
ATXN3-222ENST00000553570 TJAP1Q5JTD0 557 aa8.93□□□□□ -0.98
ATXN3-222ENST00000553570 DAXXQ9UER7 740 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-222ENST00000553570 NECTIN2Q92692 538 aa8.92□□□□□ -0.98
ATXN3-222ENST00000553570 CCDC102AQ96A19 550 aa8.92□□□□□ -0.98
ATXN3-222ENST00000553570 SLC4A3P48751 1232 aa8.89□□□□□ -0.99
ATXN3-222ENST00000553570 MTRQ99707 1265 aa8.89□□□□□ -0.99
ATXN3-222ENST00000553570 TMUB1Q9BVT8 246 aa8.89□□□□□ -0.99
ATXN3-222ENST00000553570 KCNC4Q03721 635 aa8.88□□□□□ -0.99
ATXN3-222ENST00000553570 ACTN4O43707 911 aaKnown RBP8.87□□□□□ -0.99
ATXN3-222ENST00000553570 CFHP08603 1231 aa8.87□□□□□ -0.99
ATXN3-222ENST00000553570 ZNF516Q92618 1163 aa8.87□□□□□ -0.99
ATXN3-222ENST00000553570 A0A0G2JS52 829 aa8.86□□□□□ -0.99
ATXN3-222ENST00000553570 IL21Q9HBE4 155 aa8.86□□□□□ -0.99
ATXN3-222ENST00000553570 REPIN1Q9BWE0 567 aaKnown RBP8.85□□□□□ -0.99
ATXN3-222ENST00000553570 PRR14Q9BWN1 585 aa8.85□□□□□ -0.99
ATXN3-222ENST00000553570 BICRAQ9NZM4 1560 aa8.85□□□□□ -0.99
ATXN3-222ENST00000553570 DDX11L8A8MPP1 907 aa8.84□□□□□ -0.99
ATXN3-222ENST00000553570 MDM2Q00987 491 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-222ENST00000553570 KRI1Q8N9T8 703 aaKnown RBP8.84□□□□□ -0.99
ATXN3-222ENST00000553570 GCGRP47871 477 aa8.83□□□□□ -1
ATXN3-222ENST00000553570 KMT5BQ4FZB7 885 aa8.83□□□□□ -1
ATXN3-222ENST00000553570 BLOC1S3Q6QNY0 202 aa8.83□□□□□ -1
ATXN3-222ENST00000553570 PCDHB3Q9Y5E6 796 aa8.83□□□□□ -1
ATXN3-222ENST00000553570 CD46P15529 392 aa8.82□□□□□ -1
ATXN3-222ENST00000553570 COPS2P61201 443 aa8.82□□□□□ -1
ATXN3-222ENST00000553570 ZPR1O75312 459 aa8.81□□□□□ -1
ATXN3-222ENST00000553570 AMHR2Q16671 573 aa8.81□□□□□ -1
ATXN3-222ENST00000553570 RSPH4AQ5TD94 716 aa8.81□□□□□ -1
ATXN3-222ENST00000553570 SULF1Q8IWU6 871 aa8.81□□□□□ -1
ATXN3-222ENST00000553570 RDH13Q8NBN7 331 aa8.81□□□□□ -1
ATXN3-222ENST00000553570 NKX2-3Q8TAU0 364 aa8.81□□□□□ -1
ATXN3-222ENST00000553570 GPCPD1Q9NPB8 672 aa8.81□□□□□ -1
ATXN3-222ENST00000553570 FAM217BQ9NTX9 383 aaPredicted RBP8.8□□□□□ -1
ATXN3-222ENST00000553570 SHROOM4Q9ULL8 1493 aa8.8□□□□□ -1
ATXN3-222ENST00000553570 TRIM66O15016 1216 aa8.79□□□□□ -1
ATXN3-222ENST00000553570 CLCN1P35523 988 aa8.79□□□□□ -1
ATXN3-222ENST00000553570 FUT2Q10981 343 aa8.78□□□□□ -1
ATXN3-222ENST00000553570 PUS10Q3MIT2 529 aaKnown RBP8.77□□□□□ -1.01
ATXN3-222ENST00000553570 MORN1Q5T089 497 aa8.77□□□□□ -1.01
ATXN3-222ENST00000553570 AK7Q96M32 723 aa8.77□□□□□ -1.01
ATXN3-222ENST00000553570 SLC24A3Q9HC58 644 aa8.77□□□□□ -1.01
ATXN3-222ENST00000553570 SCUBE3Q8IX30 993 aa8.76□□□□□ -1.01
ATXN3-222ENST00000553570 TLL1O43897 1013 aa8.75□□□□□ -1.01
ATXN3-222ENST00000553570 RGS20O76081 388 aa8.75□□□□□ -1.01
ATXN3-222ENST00000553570 ATP6V1AP38606 617 aa8.75□□□□□ -1.01
ATXN3-222ENST00000553570 PPP1R18Q6NYC8 613 aa8.75□□□□□ -1.01
ATXN3-222ENST00000553570 SSTR3P32745 418 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-222ENST00000553570 THAP11Q96EK4 314 aa8.74□□□□□ -1.01
ATXN3-222ENST00000553570 NR1I2O75469 434 aa8.73□□□□□ -1.01
ATXN3-222ENST00000553570 PARP9Q8IXQ6 854 aa8.73□□□□□ -1.01
ATXN3-222ENST00000553570 SLC27A5Q9Y2P5 690 aa8.73□□□□□ -1.01
ATXN3-222ENST00000553570 GIGYF2Q6Y7W6 1299 aaKnown RBP8.72□□□□□ -1.01
ATXN3-222ENST00000553570 KDM4AO75164 1064 aa8.71□□□□□ -1.02
ATXN3-222ENST00000553570 TTLL12Q14166 644 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-222ENST00000553570 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.71□□□□□ -1.02
ATXN3-222ENST00000553570 ADH1BP00325 375 aa8.7□□□□□ -1.02
ATXN3-222ENST00000553570 PDE4DQ08499 809 aa8.7□□□□□ -1.02
ATXN3-222ENST00000553570 MS4A1P11836 297 aa8.69□□□□□ -1.02
ATXN3-222ENST00000553570 BRICD5Q6PL45 260 aa8.69□□□□□ -1.02
ATXN3-222ENST00000553570 HLA-CQ95604 372 aa8.69□□□□□ -1.02
ATXN3-222ENST00000553570 SALL2Q9Y467 1007 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-222ENST00000553570 HOXA2O43364 376 aa8.68□□□□□ -1.02
ATXN3-222ENST00000553570 USP46P62068 366 aa8.68□□□□□ -1.02
ATXN3-222ENST00000553570 SPSB2Q99619 263 aa8.68□□□□□ -1.02
ATXN3-222ENST00000553570 RNF223E7ERA6 249 aa8.67□□□□□ -1.02
ATXN3-222ENST00000553570 S1PR4O95977 384 aa8.67□□□□□ -1.02
ATXN3-222ENST00000553570 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-222ENST00000553570 EMID1Q96A84 441 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-222ENST00000553570 GRIPAP1Q4V328 841 aa8.66□□□□□ -1.02
ATXN3-222ENST00000553570 RNF19BQ6ZMZ0 732 aa8.66□□□□□ -1.02
ATXN3-222ENST00000553570 SPIRE2Q8WWL2 714 aa8.66□□□□□ -1.02
ATXN3-222ENST00000553570 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
ATXN3-222ENST00000553570 SLC6A16Q9GZN6 736 aa8.65□□□□□ -1.02
ATXN3-222ENST00000553570 CC2D2AQ9P2K1 1620 aa8.65□□□□□ -1.03
ATXN3-222ENST00000553570 PPEF1O14829 653 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-222ENST00000553570 FMNL1O95466 1100 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms