RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 UNC13BO14795 1591 aa19.09■□□□□ 0.65
SIX1-202ENST00000553535 KCNA6P17658 529 aa19.09■□□□□ 0.65
SIX1-202ENST00000553535 SLC26A8Q96RN1 970 aa19.09■□□□□ 0.65
SIX1-202ENST00000553535 GCC2Q8IWJ2 1684 aa19.08■□□□□ 0.64
SIX1-202ENST00000553535 MYO5BQ9ULV0 1848 aa19.07■□□□□ 0.64
SIX1-202ENST00000553535 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
SIX1-202ENST00000553535 MED1Q15648 1581 aaPredicted RBP19.05■□□□□ 0.64
SIX1-202ENST00000553535 ZFYVE9O95405 1425 aa19.05■□□□□ 0.64
SIX1-202ENST00000553535 TMEM94Q12767 1356 aa19.04■□□□□ 0.64
SIX1-202ENST00000553535 TMEM131LA2VDJ0 1609 aa19.04■□□□□ 0.64
SIX1-202ENST00000553535 E9PCH4 1651 aa19.03■□□□□ 0.64
SIX1-202ENST00000553535 ITGAEP38570 1179 aa19.03■□□□□ 0.64
SIX1-202ENST00000553535 HDGFP51858 240 aaKnown RBP19.02■□□□□ 0.64
SIX1-202ENST00000553535 PROSER2Q86WR7 435 aaPredicted RBP19.02■□□□□ 0.64
SIX1-202ENST00000553535 IQGAP3Q86VI3 1631 aa19.02■□□□□ 0.64
SIX1-202ENST00000553535 RIMS2Q9UQ26 1411 aa19.02■□□□□ 0.64
SIX1-202ENST00000553535 BCANQ96GW7 911 aa19.02■□□□□ 0.63
SIX1-202ENST00000553535 PLEKHG1Q9ULL1 1385 aa19.01■□□□□ 0.63
SIX1-202ENST00000553535 NUP155O75694 1391 aa19.01■□□□□ 0.63
SIX1-202ENST00000553535 NWD1Q149M9 1564 aa18.99■□□□□ 0.63
SIX1-202ENST00000553535 RBM33Q96EV2 1170 aaKnown RBP18.99■□□□□ 0.63
SIX1-202ENST00000553535 FAM135BQ49AJ0 1406 aa18.98■□□□□ 0.63
SIX1-202ENST00000553535 CHGAP10645 457 aaKnown RBP18.98■□□□□ 0.63
SIX1-202ENST00000553535 NKTRP30414 1462 aaKnown RBP18.98■□□□□ 0.63
SIX1-202ENST00000553535 PPP1R15AO75807 674 aaPredicted RBP18.98■□□□□ 0.63
SIX1-202ENST00000553535 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.98■□□□□ 0.63
SIX1-202ENST00000553535 TBX22Q9Y458 520 aa18.98■□□□□ 0.63
SIX1-202ENST00000553535 CHD2O14647 1828 aaKnown RBP18.97■□□□□ 0.63
SIX1-202ENST00000553535 DCAF8L1A6NGE4 600 aa18.94■□□□□ 0.62
SIX1-202ENST00000553535 NUTM2DQ5VT03 806 aaPredicted RBP18.93■□□□□ 0.62
SIX1-202ENST00000553535 ADAMTS13Q76LX8 1427 aa18.93■□□□□ 0.62
SIX1-202ENST00000553535 RRBP1Q9P2E9 1410 aaKnown RBP18.91■□□□□ 0.62
SIX1-202ENST00000553535 MSH6P52701 1360 aa18.9■□□□□ 0.62
SIX1-202ENST00000553535 ROBO1Q9Y6N7 1651 aa18.89■□□□□ 0.61
SIX1-202ENST00000553535 SLAIN2Q9P270 581 aa18.89■□□□□ 0.61
SIX1-202ENST00000553535 PIK3R4Q99570 1358 aa18.88■□□□□ 0.61
SIX1-202ENST00000553535 NCOA3Q9Y6Q9 1424 aa18.88■□□□□ 0.61
SIX1-202ENST00000553535 DIP2AQ14689 1571 aa18.87■□□□□ 0.61
SIX1-202ENST00000553535 SPHKAPQ2M3C7 1700 aa18.87■□□□□ 0.61
SIX1-202ENST00000553535 NAIPQ13075 1403 aa18.85■□□□□ 0.61
SIX1-202ENST00000553535 RNF39Q9H2S5 420 aa18.85■□□□□ 0.61
SIX1-202ENST00000553535 RGS17Q9UGC6 210 aaPredicted RBP18.85■□□□□ 0.61
SIX1-202ENST00000553535 AMOTL2Q9Y2J4 779 aa18.83■□□□□ 0.6
SIX1-202ENST00000553535 PTPRUQ92729 1446 aa18.82■□□□□ 0.6
SIX1-202ENST00000553535 C19orf44Q9H6X5 657 aa18.82■□□□□ 0.6
SIX1-202ENST00000553535 TRPM2O94759 1503 aa18.82■□□□□ 0.6
SIX1-202ENST00000553535 ZNF326Q5BKZ1 582 aaKnown RBP18.81■□□□□ 0.6
SIX1-202ENST00000553535 C14orf37Q86TY3 774 aa18.81■□□□□ 0.6
SIX1-202ENST00000553535 NRXN3Q9Y4C0 1643 aa18.8■□□□□ 0.6
SIX1-202ENST00000553535 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.79■□□□□ 0.6
SIX1-202ENST00000553535 CADPS2Q86UW7 1296 aa18.79■□□□□ 0.6
SIX1-202ENST00000553535 SETBP1Q9Y6X0 1596 aa18.79■□□□□ 0.6
SIX1-202ENST00000553535 PHLPP1O60346 1717 aa18.78■□□□□ 0.6
SIX1-202ENST00000553535 CLTCL1P53675 1640 aa18.78■□□□□ 0.6
SIX1-202ENST00000553535 HFM1A2PYH4 1435 aa18.77■□□□□ 0.59
SIX1-202ENST00000553535 ATF3P18847 181 aa18.76■□□□□ 0.59
SIX1-202ENST00000553535 HOXD11P31277 338 aaPredicted RBP18.76■□□□□ 0.59
SIX1-202ENST00000553535 TRIM52Q96A61 297 aa18.76■□□□□ 0.59
SIX1-202ENST00000553535 METP08581 1390 aa18.75■□□□□ 0.59
SIX1-202ENST00000553535 KIF1BO60333 1816 aa18.75■□□□□ 0.59
SIX1-202ENST00000553535 NEXMIFQ5QGS0 1516 aa18.75■□□□□ 0.59
SIX1-202ENST00000553535 XRN1Q8IZH2 1706 aaKnown RBP18.75■□□□□ 0.59
SIX1-202ENST00000553535 JCADQ9P266 1359 aa18.74■□□□□ 0.59
SIX1-202ENST00000553535 COL16A1Q07092 1604 aaPredicted RBP18.73■□□□□ 0.59
SIX1-202ENST00000553535 POTEAQ6S8J7 498 aa18.72■□□□□ 0.59
SIX1-202ENST00000553535 SLC4A1APQ9BWU0 796 aaKnown RBP18.71■□□□□ 0.59
SIX1-202ENST00000553535 DCCP43146 1447 aa18.7■□□□□ 0.58
SIX1-202ENST00000553535 BRINP3Q76B58 766 aa18.7■□□□□ 0.58
SIX1-202ENST00000553535 AHDC1Q5TGY3 1603 aaPredicted RBP18.69■□□□□ 0.58
SIX1-202ENST00000553535 VGFO15240 615 aaPredicted RBP18.68■□□□□ 0.58
SIX1-202ENST00000553535 RPGRIP1LQ68CZ1 1315 aa18.67■□□□□ 0.58
SIX1-202ENST00000553535 MST1RQ04912 1400 aa18.66■□□□□ 0.58
SIX1-202ENST00000553535 SPATA31A6Q5VVP1 1343 aa18.66■□□□□ 0.58
SIX1-202ENST00000553535 ADGRL3Q9HAR2 1447 aa18.64■□□□□ 0.57
SIX1-202ENST00000553535 C1QBPQ07021 282 aaKnown RBP18.64■□□□□ 0.57
SIX1-202ENST00000553535 SETD1AO15047 1707 aaKnown RBP18.63■□□□□ 0.57
SIX1-202ENST00000553535 SHPRHQ149N8 1683 aa18.63■□□□□ 0.57
SIX1-202ENST00000553535 LRP6O75581 1613 aa18.62■□□□□ 0.57
SIX1-202ENST00000553535 ASXL1Q8IXJ9 1541 aa18.62■□□□□ 0.57
SIX1-202ENST00000553535 PPLO60437 1756 aa18.61■□□□□ 0.57
SIX1-202ENST00000553535 NALCNQ8IZF0 1738 aa18.61■□□□□ 0.57
SIX1-202ENST00000553535 ROBO2Q9HCK4 1378 aa18.59■□□□□ 0.57
SIX1-202ENST00000553535 SETD5Q9C0A6 1442 aa18.59■□□□□ 0.57
SIX1-202ENST00000553535 NHSL1Q5SYE7 1610 aa18.59■□□□□ 0.57
SIX1-202ENST00000553535 MPHOSPH9Q99550 1183 aa18.59■□□□□ 0.57
SIX1-202ENST00000553535 PTCH1Q13635 1447 aa18.59■□□□□ 0.57
SIX1-202ENST00000553535 PRAG1Q86YV5 1406 aa18.58■□□□□ 0.56
SIX1-202ENST00000553535 MEX3CQ5U5Q3 659 aaKnown RBP18.57■□□□□ 0.56
SIX1-202ENST00000553535 LRRC59Q96AG4 307 aaKnown RBP18.57■□□□□ 0.56
SIX1-202ENST00000553535 DDX17Q92841 729 aaKnown RBP18.56■□□□□ 0.56
SIX1-202ENST00000553535 PPP4R3CPQ6ZMV5 832 aa18.55■□□□□ 0.56
SIX1-202ENST00000553535 C1orf167Q5SNV9 1468 aa18.55■□□□□ 0.56
SIX1-202ENST00000553535 CCDC144AA2RUR9 1427 aa18.55■□□□□ 0.56
SIX1-202ENST00000553535 SPATA31E1Q6ZUB1 1445 aa18.55■□□□□ 0.56
SIX1-202ENST00000553535 ADGRF5Q8IZF2 1346 aa18.55■□□□□ 0.56
SIX1-202ENST00000553535 ZNF772Q68DY9 489 aaPredicted RBP18.55■□□□□ 0.56
SIX1-202ENST00000553535 NUTM2BA6NNL0 878 aaPredicted RBP18.54■□□□□ 0.56
SIX1-202ENST00000553535 NUTM2EB1AL46 878 aaPredicted RBP18.54■□□□□ 0.56
SIX1-202ENST00000553535 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
SIX1-202ENST00000553535 NUTM2AQ8IVF1 878 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms