RNA–Protein interactions for RNA: ENST00000553343.5

SDR39U1-204, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 681 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-204ENST00000553343 PPLO60437 1756 aa29.75■■■□□ 2.35
SDR39U1-204ENST00000553343 RIMS2Q9UQ26 1411 aa29.74■■■□□ 2.35
SDR39U1-204ENST00000553343 SCAF11Q99590 1463 aaKnown RBP29.74■■■□□ 2.35
SDR39U1-204ENST00000553343 EID1Q9Y6B2 187 aa29.73■■■□□ 2.35
SDR39U1-204ENST00000553343 ZNF326Q5BKZ1 582 aaKnown RBP29.72■■■□□ 2.35
SDR39U1-204ENST00000553343 TIMELESSQ9UNS1 1208 aa29.72■■■□□ 2.35
SDR39U1-204ENST00000553343 MYOM2P54296 1465 aa29.72■■■□□ 2.35
SDR39U1-204ENST00000553343 ANKLE2Q86XL3 938 aa29.71■■■□□ 2.35
SDR39U1-204ENST00000553343 MED14O60244 1454 aa29.7■■■□□ 2.35
SDR39U1-204ENST00000553343 SIN3AQ96ST3 1273 aa29.69■■■□□ 2.34
SDR39U1-204ENST00000553343 VGFO15240 615 aaPredicted RBP29.67■■■□□ 2.34
SDR39U1-204ENST00000553343 TONSLQ96HA7 1378 aa29.65■■■□□ 2.34
SDR39U1-204ENST00000553343 PLEKHG1Q9ULL1 1385 aa29.64■■■□□ 2.34
SDR39U1-204ENST00000553343 NEUROD1Q13562 356 aa29.64■■■□□ 2.34
SDR39U1-204ENST00000553343 RGL3Q3MIN7 710 aa29.64■■■□□ 2.34
SDR39U1-204ENST00000553343 TXNDC2Q86VQ3 553 aa29.64■■■□□ 2.34
SDR39U1-204ENST00000553343 STRCQ7RTU9 1775 aa29.63■■■□□ 2.33
SDR39U1-204ENST00000553343 HSPA2P54652 639 aa29.63■■■□□ 2.33
SDR39U1-204ENST00000553343 NRXN1Q9ULB1 1477 aa29.62■■■□□ 2.33
SDR39U1-204ENST00000553343 SETBP1Q9Y6X0 1596 aa29.61■■■□□ 2.33
SDR39U1-204ENST00000553343 IQGAP1P46940 1657 aa29.6■■■□□ 2.33
SDR39U1-204ENST00000553343 PPP1R15AO75807 674 aaPredicted RBP29.6■■■□□ 2.33
SDR39U1-204ENST00000553343 LTKP29376 864 aa29.6■■■□□ 2.33
SDR39U1-204ENST00000553343 DIP2AQ14689 1571 aa29.6■■■□□ 2.33
SDR39U1-204ENST00000553343 DMRT2Q9Y5R5 561 aa29.59■■■□□ 2.33
SDR39U1-204ENST00000553343 NPHP4O75161 1426 aaPredicted RBP29.58■■■□□ 2.33
SDR39U1-204ENST00000553343 LAMC1P11047 1609 aa29.56■■■□□ 2.32
SDR39U1-204ENST00000553343 PIK3C2GO75747 1445 aa29.55■■■□□ 2.32
SDR39U1-204ENST00000553343 DCAF11Q8TEB1 546 aa29.55■■■□□ 2.32
SDR39U1-204ENST00000553343 L3MBTL2Q969R5 705 aa29.55■■■□□ 2.32
SDR39U1-204ENST00000553343 NRXN3Q9Y4C0 1643 aa29.52■■■□□ 2.32
SDR39U1-204ENST00000553343 NCKAP5LQ9HCH0 1330 aa29.51■■■□□ 2.32
SDR39U1-204ENST00000553343 KIAA1210Q9ULL0 1709 aa29.51■■■□□ 2.31
SDR39U1-204ENST00000553343 PRAG1Q86YV5 1406 aa29.49■■■□□ 2.31
SDR39U1-204ENST00000553343 ADGRF5Q8IZF2 1346 aa29.47■■■□□ 2.31
SDR39U1-204ENST00000553343 ADAMTS13Q76LX8 1427 aa29.47■■■□□ 2.31
SDR39U1-204ENST00000553343 PIK3R4Q99570 1358 aa29.47■■■□□ 2.31
SDR39U1-204ENST00000553343 TBX22Q9Y458 520 aa29.45■■■□□ 2.31
SDR39U1-204ENST00000553343 SETD1AO15047 1707 aaKnown RBP29.45■■■□□ 2.3
SDR39U1-204ENST00000553343 ALKQ9UM73 1620 aa29.45■■■□□ 2.3
SDR39U1-204ENST00000553343 NUTM2DQ5VT03 806 aaPredicted RBP29.44■■■□□ 2.3
SDR39U1-204ENST00000553343 KDM2AQ9Y2K7 1162 aa29.42■■■□□ 2.3
SDR39U1-204ENST00000553343 C14orf93Q9H972 538 aaKnown RBP29.4■■■□□ 2.3
SDR39U1-204ENST00000553343 BCANQ96GW7 911 aa29.39■■■□□ 2.3
SDR39U1-204ENST00000553343 TRPM1Q7Z4N2 1603 aa29.38■■■□□ 2.29
SDR39U1-204ENST00000553343 NWD1Q149M9 1564 aa29.35■■■□□ 2.29
SDR39U1-204ENST00000553343 RALGAPBQ86X10 1494 aa29.33■■■□□ 2.29
SDR39U1-204ENST00000553343 CHD2O14647 1828 aaKnown RBP29.33■■■□□ 2.29
SDR39U1-204ENST00000553343 ADGRB1O14514 1584 aa29.32■■■□□ 2.28
SDR39U1-204ENST00000553343 SLC26A8Q96RN1 970 aa29.32■■■□□ 2.28
SDR39U1-204ENST00000553343 ZEB1P37275 1124 aaPredicted RBP29.3■■■□□ 2.28
SDR39U1-204ENST00000553343 ASXL1Q8IXJ9 1541 aa29.3■■■□□ 2.28
SDR39U1-204ENST00000553343 KNDC1Q76NI1 1749 aa29.29■■■□□ 2.28
SDR39U1-204ENST00000553343 CFAP70Q5T0N1 1121 aa29.29■■■□□ 2.28
SDR39U1-204ENST00000553343 XRN1Q8IZH2 1706 aaKnown RBP29.28■■■□□ 2.28
SDR39U1-204ENST00000553343 GPRASP1Q5JY77 1395 aa29.28■■■□□ 2.28
SDR39U1-204ENST00000553343 NKTRP30414 1462 aaKnown RBP29.28■■■□□ 2.28
SDR39U1-204ENST00000553343 METP08581 1390 aa29.27■■■□□ 2.28
SDR39U1-204ENST00000553343 TECPR2O15040 1411 aa29.27■■■□□ 2.28
SDR39U1-204ENST00000553343 LRPPRCP42704 1394 aaKnown RBP29.26■■■□□ 2.27
SDR39U1-204ENST00000553343 KCNA6P17658 529 aa29.25■■■□□ 2.27
SDR39U1-204ENST00000553343 NBPF8Q3BBV2 869 aa29.25■■■□□ 2.27
SDR39U1-204ENST00000553343 CPS1P31327 1500 aa29.25■■■□□ 2.27
SDR39U1-204ENST00000553343 PTCH1Q13635 1447 aa29.24■■■□□ 2.27
SDR39U1-204ENST00000553343 DLC1Q96QB1 1528 aa29.24■■■□□ 2.27
SDR39U1-204ENST00000553343 ABCC11Q96J66 1382 aa29.24■■■□□ 2.27
SDR39U1-204ENST00000553343 YTHDC2Q9H6S0 1430 aaKnown RBP29.23■■■□□ 2.27
SDR39U1-204ENST00000553343 ROCK2O75116 1388 aaKnown RBP29.23■■■□□ 2.27
SDR39U1-204ENST00000553343 PTPRUQ92729 1446 aa29.2■■■□□ 2.27
SDR39U1-204ENST00000553343 SIRT1Q96EB6 747 aa29.2■■■□□ 2.26
SDR39U1-204ENST00000553343 AMOTL2Q9Y2J4 779 aa29.17■■■□□ 2.26
SDR39U1-204ENST00000553343 FAM135BQ49AJ0 1406 aa29.17■■■□□ 2.26
SDR39U1-204ENST00000553343 NCOA3Q9Y6Q9 1424 aa29.17■■■□□ 2.26
SDR39U1-204ENST00000553343 STRCP1A6NGW2 1772 aa29.16■■■□□ 2.26
SDR39U1-204ENST00000553343 SENP3Q9H4L4 574 aaPredicted RBP29.15■■■□□ 2.26
SDR39U1-204ENST00000553343 LTBP4Q8N2S1 1624 aa29.15■■■□□ 2.26
SDR39U1-204ENST00000553343 NBPF1Q3BBV0 1214 aa29.14■■■□□ 2.26
SDR39U1-204ENST00000553343 TMEM132EQ6IEE7 984 aa29.14■■■□□ 2.26
SDR39U1-204ENST00000553343 ZNF335Q9H4Z2 1342 aaPredicted RBP29.14■■■□□ 2.25
SDR39U1-204ENST00000553343 EIF3AQ14152 1382 aaKnown RBP29.13■■■□□ 2.25
SDR39U1-204ENST00000553343 ARHGEF28Q8N1W1 1705 aaKnown RBP29.12■■■□□ 2.25
SDR39U1-204ENST00000553343 CARD11Q9BXL7 1154 aa29.11■■■□□ 2.25
SDR39U1-204ENST00000553343 IQSEC2Q5JU85 1478 aa29.08■■■□□ 2.25
SDR39U1-204ENST00000553343 LRRC7Q96NW7 1537 aa29.06■■■□□ 2.24
SDR39U1-204ENST00000553343 ROBO2Q9HCK4 1378 aa29.05■■■□□ 2.24
SDR39U1-204ENST00000553343 STK26Q9P289 416 aa29.03■■■□□ 2.24
SDR39U1-204ENST00000553343 TRAK1Q9UPV9 953 aa29.03■■■□□ 2.24
SDR39U1-204ENST00000553343 PROSER2Q86WR7 435 aaPredicted RBP29.01■■■□□ 2.23
SDR39U1-204ENST00000553343 SBNO2Q9Y2G9 1366 aa29.01■■■□□ 2.23
SDR39U1-204ENST00000553343 SLC24A1O60721 1099 aa29■■■□□ 2.23
SDR39U1-204ENST00000553343 ADGRB2O60241 1585 aa29■■■□□ 2.23
SDR39U1-204ENST00000553343 DCCP43146 1447 aa28.99■■■□□ 2.23
SDR39U1-204ENST00000553343 TMEM94Q12767 1356 aa28.99■■■□□ 2.23
SDR39U1-204ENST00000553343 USP47Q96K76 1375 aa28.99■■■□□ 2.23
SDR39U1-204ENST00000553343 XIRP1Q702N8 1843 aaKnown RBP28.99■■■□□ 2.23
SDR39U1-204ENST00000553343 ADGRL3Q9HAR2 1447 aa28.98■■■□□ 2.23
SDR39U1-204ENST00000553343 CENPJQ9HC77 1338 aaPredicted RBP28.97■■■□□ 2.23
SDR39U1-204ENST00000553343 POGKQ9P215 609 aa28.97■■■□□ 2.23
SDR39U1-204ENST00000553343 PRAM1Q96QH2 718 aa28.96■■■□□ 2.23
SDR39U1-204ENST00000553343 QRICH2Q9H0J4 1663 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms