RNA–Protein interactions for RNA: ENST00000553288.5

AL355916.1-201, humanhuman

TSL 3

Gene AL355916.1, Length 470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355916.1-201ENST00000553288 PPP4CP60510 307 aa9.85□□□□□ -0.83
AL355916.1-201ENST00000553288 RBM46Q8TBY0 533 aaKnown RBP9.85□□□□□ -0.83
AL355916.1-201ENST00000553288 TSR3Q9UJK0 312 aaKnown RBP9.85□□□□□ -0.83
AL355916.1-201ENST00000553288 TULP1O00294 542 aaPredicted RBP9.84□□□□□ -0.83
AL355916.1-201ENST00000553288 PXYLP1Q8TE99 480 aa9.84□□□□□ -0.83
AL355916.1-201ENST00000553288 METTL3Q86U44 580 aaKnown RBP9.83□□□□□ -0.84
AL355916.1-201ENST00000553288 EIF4G1Q04637 1599 aaKnown RBP9.81□□□□□ -0.84
AL355916.1-201ENST00000553288 DNAJB2P25686 324 aa9.81□□□□□ -0.84
AL355916.1-201ENST00000553288 APLP1P51693 650 aa9.81□□□□□ -0.84
AL355916.1-201ENST00000553288 HDGFP51858 240 aaKnown RBP9.81□□□□□ -0.84
AL355916.1-201ENST00000553288 TMEM134Q9H6X4 195 aa9.81□□□□□ -0.84
AL355916.1-201ENST00000553288 OATP04181 439 aa9.78□□□□□ -0.84
AL355916.1-201ENST00000553288 ZC3H15Q8WU90 426 aaKnown RBP9.78□□□□□ -0.84
AL355916.1-201ENST00000553288 SLC10A3P09131 477 aa9.77□□□□□ -0.85
AL355916.1-201ENST00000553288 CC2D2AQ9P2K1 1620 aa9.77□□□□□ -0.85
AL355916.1-201ENST00000553288 BAZ1AQ9NRL2 1556 aaPredicted RBP9.76□□□□□ -0.85
AL355916.1-201ENST00000553288 IRF6O14896 467 aa9.76□□□□□ -0.85
AL355916.1-201ENST00000553288 SLF2Q8IX21 1173 aa9.76□□□□□ -0.85
AL355916.1-201ENST00000553288 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.75□□□□□ -0.85
AL355916.1-201ENST00000553288 MAP2K5Q13163 448 aa9.75□□□□□ -0.85
AL355916.1-201ENST00000553288 ZNF516Q92618 1163 aa9.75□□□□□ -0.85
AL355916.1-201ENST00000553288 CCDC102AQ96A19 550 aa9.75□□□□□ -0.85
AL355916.1-201ENST00000553288 COPS2P61201 443 aa9.74□□□□□ -0.85
AL355916.1-201ENST00000553288 KRI1Q8N9T8 703 aaKnown RBP9.73□□□□□ -0.85
AL355916.1-201ENST00000553288 DDX11L8A8MPP1 907 aa9.72□□□□□ -0.85
AL355916.1-201ENST00000553288 MDM2Q00987 491 aaPredicted RBP9.72□□□□□ -0.85
AL355916.1-201ENST00000553288 TJAP1Q5JTD0 557 aa9.72□□□□□ -0.85
AL355916.1-201ENST00000553288 MTRQ99707 1265 aa9.72□□□□□ -0.85
AL355916.1-201ENST00000553288 ZMYND10O75800 440 aa9.71□□□□□ -0.86
AL355916.1-201ENST00000553288 CFHP08603 1231 aa9.71□□□□□ -0.86
AL355916.1-201ENST00000553288 CECR2Q9BXF3 1484 aa9.71□□□□□ -0.86
AL355916.1-201ENST00000553288 SMARCA4P51532 1647 aa9.71□□□□□ -0.86
AL355916.1-201ENST00000553288 BARGINQ6ZT62 677 aa9.7□□□□□ -0.86
AL355916.1-201ENST00000553288 RDH13Q8NBN7 331 aa9.7□□□□□ -0.86
AL355916.1-201ENST00000553288 NKX2-3Q8TAU0 364 aa9.7□□□□□ -0.86
AL355916.1-201ENST00000553288 MINK1Q8N4C8 1332 aaPredicted RBP9.7□□□□□ -0.86
AL355916.1-201ENST00000553288 SMARCA2P51531 1590 aa9.7□□□□□ -0.86
AL355916.1-201ENST00000553288 DAXXQ9UER7 740 aaPredicted RBP9.69□□□□□ -0.86
AL355916.1-201ENST00000553288 ITGBL1O95965 494 aaPredicted RBP9.68□□□□□ -0.86
AL355916.1-201ENST00000553288 PUS10Q3MIT2 529 aaKnown RBP9.68□□□□□ -0.86
AL355916.1-201ENST00000553288 BLOC1S3Q6QNY0 202 aa9.68□□□□□ -0.86
AL355916.1-201ENST00000553288 NYAP1Q6ZVC0 841 aa9.68□□□□□ -0.86
AL355916.1-201ENST00000553288 REPIN1Q9BWE0 567 aaKnown RBP9.68□□□□□ -0.86
AL355916.1-201ENST00000553288 SLC4A3P48751 1232 aa9.67□□□□□ -0.86
AL355916.1-201ENST00000553288 KCNC4Q03721 635 aa9.67□□□□□ -0.86
AL355916.1-201ENST00000553288 BCANQ96GW7 911 aa9.67□□□□□ -0.86
AL355916.1-201ENST00000553288 PCDHB3Q9Y5E6 796 aa9.66□□□□□ -0.86
AL355916.1-201ENST00000553288 TLL1O43897 1013 aa9.64□□□□□ -0.87
AL355916.1-201ENST00000553288 IL21Q9HBE4 155 aa9.63□□□□□ -0.87
AL355916.1-201ENST00000553288 SLC24A3Q9HC58 644 aa9.63□□□□□ -0.87
AL355916.1-201ENST00000553288 A0A0G2JS52 829 aa9.62□□□□□ -0.87
AL355916.1-201ENST00000553288 ACTN4O43707 911 aaKnown RBP9.62□□□□□ -0.87
AL355916.1-201ENST00000553288 BAZ1BQ9UIG0 1483 aaKnown RBP9.61□□□□□ -0.87
AL355916.1-201ENST00000553288 FUT2Q10981 343 aa9.61□□□□□ -0.87
AL355916.1-201ENST00000553288 KMT5BQ4FZB7 885 aa9.61□□□□□ -0.87
AL355916.1-201ENST00000553288 ATAD2BQ9ULI0 1458 aa9.59□□□□□ -0.87
AL355916.1-201ENST00000553288 MROH2BQ7Z745 1585 aa9.59□□□□□ -0.87
AL355916.1-201ENST00000553288 ZPR1O75312 459 aa9.59□□□□□ -0.87
AL355916.1-201ENST00000553288 GCGRP47871 477 aa9.59□□□□□ -0.87
AL355916.1-201ENST00000553288 HLA-CQ95604 372 aa9.59□□□□□ -0.87
AL355916.1-201ENST00000553288 HMGXB3Q12766 1538 aa9.58□□□□□ -0.88
AL355916.1-201ENST00000553288 TRIM66O15016 1216 aa9.58□□□□□ -0.88
AL355916.1-201ENST00000553288 TTLL12Q14166 644 aaPredicted RBP9.58□□□□□ -0.88
AL355916.1-201ENST00000553288 IFFO2Q5TF58 517 aa9.58□□□□□ -0.88
AL355916.1-201ENST00000553288 NECTIN2Q92692 538 aa9.58□□□□□ -0.88
AL355916.1-201ENST00000553288 TMUB1Q9BVT8 246 aa9.58□□□□□ -0.88
AL355916.1-201ENST00000553288 NCAPD3P42695 1498 aa9.58□□□□□ -0.88
AL355916.1-201ENST00000553288 CD46P15529 392 aa9.57□□□□□ -0.88
AL355916.1-201ENST00000553288 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
AL355916.1-201ENST00000553288 FAM217BQ9NTX9 383 aaPredicted RBP9.57□□□□□ -0.88
AL355916.1-201ENST00000553288 PEG3Q9GZU2 1588 aa9.57□□□□□ -0.88
AL355916.1-201ENST00000553288 RSPH4AQ5TD94 716 aa9.56□□□□□ -0.88
AL355916.1-201ENST00000553288 PPP1R18Q6NYC8 613 aa9.56□□□□□ -0.88
AL355916.1-201ENST00000553288 SULF1Q8IWU6 871 aa9.56□□□□□ -0.88
AL355916.1-201ENST00000553288 SCUBE3Q8IX30 993 aa9.56□□□□□ -0.88
AL355916.1-201ENST00000553288 PRR14Q9BWN1 585 aa9.56□□□□□ -0.88
AL355916.1-201ENST00000553288 CLCN1P35523 988 aa9.55□□□□□ -0.88
AL355916.1-201ENST00000553288 WIZO95785 1651 aa9.55□□□□□ -0.88
AL355916.1-201ENST00000553288 PPEF1O14829 653 aaPredicted RBP9.54□□□□□ -0.88
AL355916.1-201ENST00000553288 SSTR3P32745 418 aaPredicted RBP9.54□□□□□ -0.88
AL355916.1-201ENST00000553288 GUCA2AQ02747 115 aa9.54□□□□□ -0.88
AL355916.1-201ENST00000553288 AK7Q96M32 723 aa9.54□□□□□ -0.88
AL355916.1-201ENST00000553288 SLC27A5Q9Y2P5 690 aa9.54□□□□□ -0.88
AL355916.1-201ENST00000553288 MORN1Q5T089 497 aa9.53□□□□□ -0.88
AL355916.1-201ENST00000553288 GIGYF2Q6Y7W6 1299 aaKnown RBP9.53□□□□□ -0.88
AL355916.1-201ENST00000553288 PARP9Q8IXQ6 854 aa9.53□□□□□ -0.88
AL355916.1-201ENST00000553288 AMHR2Q16671 573 aa9.52□□□□□ -0.89
AL355916.1-201ENST00000553288 RSF1Q96T23 1441 aaPredicted RBP9.52□□□□□ -0.89
AL355916.1-201ENST00000553288 S1PR4O95977 384 aa9.51□□□□□ -0.89
AL355916.1-201ENST00000553288 ATP6V1AP38606 617 aa9.51□□□□□ -0.89
AL355916.1-201ENST00000553288 SUPT5HO00267 1087 aaKnown RBP9.5□□□□□ -0.89
AL355916.1-201ENST00000553288 KDM4AO75164 1064 aa9.5□□□□□ -0.89
AL355916.1-201ENST00000553288 NR1I2O75469 434 aa9.5□□□□□ -0.89
AL355916.1-201ENST00000553288 MS4A1P11836 297 aa9.5□□□□□ -0.89
AL355916.1-201ENST00000553288 RNF19BQ6ZMZ0 732 aa9.5□□□□□ -0.89
AL355916.1-201ENST00000553288 PDE4DQ08499 809 aa9.49□□□□□ -0.89
AL355916.1-201ENST00000553288 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.49□□□□□ -0.89
AL355916.1-201ENST00000553288 SYMPKQ92797 1274 aaKnown RBP9.48□□□□□ -0.89
AL355916.1-201ENST00000553288 SPSB2Q99619 263 aa9.48□□□□□ -0.89
AL355916.1-201ENST00000553288 PRDM9Q9NQV7 894 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms