RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 SPATA31E1Q6ZUB1 1445 aa24.88■■□□□ 1.57
ITGA5-213ENST00000553071 SIN3AQ96ST3 1273 aa24.88■■□□□ 1.57
ITGA5-213ENST00000553071 SLIT1O75093 1534 aa24.87■■□□□ 1.57
ITGA5-213ENST00000553071 DMRT2Q9Y5R5 561 aa24.87■■□□□ 1.57
ITGA5-213ENST00000553071 ARHGAP23Q9P227 1491 aa24.86■■□□□ 1.57
ITGA5-213ENST00000553071 PPP1R15AO75807 674 aaPredicted RBP24.86■■□□□ 1.57
ITGA5-213ENST00000553071 RIMS2Q9UQ26 1411 aa24.86■■□□□ 1.57
ITGA5-213ENST00000553071 TIMELESSQ9UNS1 1208 aa24.85■■□□□ 1.57
ITGA5-213ENST00000553071 LTKP29376 864 aa24.81■■□□□ 1.56
ITGA5-213ENST00000553071 SCAF11Q99590 1463 aaKnown RBP24.81■■□□□ 1.56
ITGA5-213ENST00000553071 ZFYVE9O95405 1425 aa24.8■■□□□ 1.56
ITGA5-213ENST00000553071 DCAF11Q8TEB1 546 aa24.79■■□□□ 1.56
ITGA5-213ENST00000553071 NCKAP5LQ9HCH0 1330 aa24.79■■□□□ 1.56
ITGA5-213ENST00000553071 TONSLQ96HA7 1378 aa24.79■■□□□ 1.56
ITGA5-213ENST00000553071 BCANQ96GW7 911 aa24.77■■□□□ 1.56
ITGA5-213ENST00000553071 PLEKHG1Q9ULL1 1385 aa24.76■■□□□ 1.55
ITGA5-213ENST00000553071 L3MBTL2Q969R5 705 aa24.75■■□□□ 1.55
ITGA5-213ENST00000553071 MED14O60244 1454 aa24.75■■□□□ 1.55
ITGA5-213ENST00000553071 NUTM2DQ5VT03 806 aaPredicted RBP24.74■■□□□ 1.55
ITGA5-213ENST00000553071 MYO5BQ9ULV0 1848 aa24.73■■□□□ 1.55
ITGA5-213ENST00000553071 NEXMIFQ5QGS0 1516 aa24.73■■□□□ 1.55
ITGA5-213ENST00000553071 NPHP4O75161 1426 aaPredicted RBP24.73■■□□□ 1.55
ITGA5-213ENST00000553071 KDM2AQ9Y2K7 1162 aa24.73■■□□□ 1.55
ITGA5-213ENST00000553071 MYOM2P54296 1465 aa24.7■■□□□ 1.54
ITGA5-213ENST00000553071 TBX22Q9Y458 520 aa24.69■■□□□ 1.54
ITGA5-213ENST00000553071 ADGRF5Q8IZF2 1346 aa24.67■■□□□ 1.54
ITGA5-213ENST00000553071 PPLO60437 1756 aa24.65■■□□□ 1.54
ITGA5-213ENST00000553071 POLR1AO95602 1720 aaPredicted RBP24.65■■□□□ 1.54
ITGA5-213ENST00000553071 STRCQ7RTU9 1775 aa24.63■■□□□ 1.53
ITGA5-213ENST00000553071 SLC26A8Q96RN1 970 aa24.62■■□□□ 1.53
ITGA5-213ENST00000553071 C14orf93Q9H972 538 aaKnown RBP24.62■■□□□ 1.53
ITGA5-213ENST00000553071 NRXN1Q9ULB1 1477 aa24.62■■□□□ 1.53
ITGA5-213ENST00000553071 PIK3C2GO75747 1445 aa24.61■■□□□ 1.53
ITGA5-213ENST00000553071 SETBP1Q9Y6X0 1596 aa24.6■■□□□ 1.53
ITGA5-213ENST00000553071 PIK3R4Q99570 1358 aa24.6■■□□□ 1.53
ITGA5-213ENST00000553071 IFT172Q9UG01 1749 aa24.6■■□□□ 1.53
ITGA5-213ENST00000553071 IQGAP1P46940 1657 aa24.59■■□□□ 1.53
ITGA5-213ENST00000553071 ADAMTS13Q76LX8 1427 aa24.58■■□□□ 1.53
ITGA5-213ENST00000553071 DIP2AQ14689 1571 aa24.58■■□□□ 1.52
ITGA5-213ENST00000553071 PRAG1Q86YV5 1406 aa24.56■■□□□ 1.52
ITGA5-213ENST00000553071 CFAP70Q5T0N1 1121 aa24.55■■□□□ 1.52
ITGA5-213ENST00000553071 SENP3Q9H4L4 574 aaPredicted RBP24.55■■□□□ 1.52
ITGA5-213ENST00000553071 KCNA6P17658 529 aa24.54■■□□□ 1.52
ITGA5-213ENST00000553071 ALKQ9UM73 1620 aa24.52■■□□□ 1.52
ITGA5-213ENST00000553071 ZEB1P37275 1124 aaPredicted RBP24.51■■□□□ 1.51
ITGA5-213ENST00000553071 LAMC1P11047 1609 aa24.49■■□□□ 1.51
ITGA5-213ENST00000553071 METP08581 1390 aa24.48■■□□□ 1.51
ITGA5-213ENST00000553071 AMOTL2Q9Y2J4 779 aa24.48■■□□□ 1.51
ITGA5-213ENST00000553071 NRXN3Q9Y4C0 1643 aa24.47■■□□□ 1.51
ITGA5-213ENST00000553071 NBPF8Q3BBV2 869 aa24.47■■□□□ 1.51
ITGA5-213ENST00000553071 TMEM132EQ6IEE7 984 aa24.45■■□□□ 1.5
ITGA5-213ENST00000553071 LRPPRCP42704 1394 aaKnown RBP24.44■■□□□ 1.5
ITGA5-213ENST00000553071 SIRT1Q96EB6 747 aa24.44■■□□□ 1.5
ITGA5-213ENST00000553071 KIAA1210Q9ULL0 1709 aa24.44■■□□□ 1.5
ITGA5-213ENST00000553071 ROCK2O75116 1388 aaKnown RBP24.43■■□□□ 1.5
ITGA5-213ENST00000553071 ABCC11Q96J66 1382 aa24.43■■□□□ 1.5
ITGA5-213ENST00000553071 ZNF335Q9H4Z2 1342 aaPredicted RBP24.43■■□□□ 1.5
ITGA5-213ENST00000553071 NBPF1Q3BBV0 1214 aa24.42■■□□□ 1.5
ITGA5-213ENST00000553071 STK26Q9P289 416 aa24.41■■□□□ 1.5
ITGA5-213ENST00000553071 YTHDC2Q9H6S0 1430 aaKnown RBP24.41■■□□□ 1.5
ITGA5-213ENST00000553071 PROSER2Q86WR7 435 aaPredicted RBP24.39■■□□□ 1.49
ITGA5-213ENST00000553071 CARD11Q9BXL7 1154 aa24.39■■□□□ 1.49
ITGA5-213ENST00000553071 GPRASP1Q5JY77 1395 aa24.39■■□□□ 1.49
ITGA5-213ENST00000553071 RALGAPBQ86X10 1494 aa24.38■■□□□ 1.49
ITGA5-213ENST00000553071 CPS1P31327 1500 aa24.38■■□□□ 1.49
ITGA5-213ENST00000553071 NKTRP30414 1462 aaKnown RBP24.38■■□□□ 1.49
ITGA5-213ENST00000553071 PTPRUQ92729 1446 aa24.37■■□□□ 1.49
ITGA5-213ENST00000553071 ADGRB1O14514 1584 aa24.37■■□□□ 1.49
ITGA5-213ENST00000553071 TECPR2O15040 1411 aa24.36■■□□□ 1.49
ITGA5-213ENST00000553071 SETD1AO15047 1707 aaKnown RBP24.36■■□□□ 1.49
ITGA5-213ENST00000553071 TRAK1Q9UPV9 953 aa24.36■■□□□ 1.49
ITGA5-213ENST00000553071 NCOA3Q9Y6Q9 1424 aa24.35■■□□□ 1.49
ITGA5-213ENST00000553071 CHD2O14647 1828 aaKnown RBP24.35■■□□□ 1.49
ITGA5-213ENST00000553071 PTCH1Q13635 1447 aa24.35■■□□□ 1.49
ITGA5-213ENST00000553071 NWD1Q149M9 1564 aa24.34■■□□□ 1.49
ITGA5-213ENST00000553071 TRPM1Q7Z4N2 1603 aa24.34■■□□□ 1.49
ITGA5-213ENST00000553071 FAM135BQ49AJ0 1406 aa24.34■■□□□ 1.49
ITGA5-213ENST00000553071 EIF3AQ14152 1382 aaKnown RBP24.33■■□□□ 1.49
ITGA5-213ENST00000553071 POGKQ9P215 609 aa24.33■■□□□ 1.49
ITGA5-213ENST00000553071 ASXL1Q8IXJ9 1541 aa24.31■■□□□ 1.48
ITGA5-213ENST00000553071 SLC24A1O60721 1099 aa24.31■■□□□ 1.48
ITGA5-213ENST00000553071 DLC1Q96QB1 1528 aa24.3■■□□□ 1.48
ITGA5-213ENST00000553071 C14orf37Q86TY3 774 aa24.29■■□□□ 1.48
ITGA5-213ENST00000553071 XRN1Q8IZH2 1706 aaKnown RBP24.29■■□□□ 1.48
ITGA5-213ENST00000553071 ROBO2Q9HCK4 1378 aa24.29■■□□□ 1.48
ITGA5-213ENST00000553071 PRAM1Q96QH2 718 aa24.28■■□□□ 1.48
ITGA5-213ENST00000553071 TMEM94Q12767 1356 aa24.28■■□□□ 1.48
ITGA5-213ENST00000553071 LTBP4Q8N2S1 1624 aa24.28■■□□□ 1.48
ITGA5-213ENST00000553071 LRRC7Q96NW7 1537 aa24.26■■□□□ 1.47
ITGA5-213ENST00000553071 WAPLQ7Z5K2 1190 aa24.26■■□□□ 1.47
ITGA5-213ENST00000553071 C19orf44Q9H6X5 657 aa24.26■■□□□ 1.47
ITGA5-213ENST00000553071 CENPJQ9HC77 1338 aaPredicted RBP24.25■■□□□ 1.47
ITGA5-213ENST00000553071 KNDC1Q76NI1 1749 aa24.24■■□□□ 1.47
ITGA5-213ENST00000553071 CERKQ8TCT0 537 aa24.24■■□□□ 1.47
ITGA5-213ENST00000553071 MSH6P52701 1360 aa24.22■■□□□ 1.47
ITGA5-213ENST00000553071 EIF4G2P78344 907 aaKnown RBP eCLIP24.22■■□□□ 1.47
ITGA5-213ENST00000553071 IQSEC2Q5JU85 1478 aa24.21■■□□□ 1.47
ITGA5-213ENST00000553071 STRCP1A6NGW2 1772 aa24.21■■□□□ 1.47
ITGA5-213ENST00000553071 USP47Q96K76 1375 aa24.19■■□□□ 1.46
ITGA5-213ENST00000553071 ATF3P18847 181 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms