RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 IQGAP1P46940 1657 aa11.51□□□□□ -0.57
NPAS3-213ENST00000552874 ZFYVE9O95405 1425 aa11.51□□□□□ -0.57
NPAS3-213ENST00000552874 ESF1Q9H501 851 aaKnown RBP11.5□□□□□ -0.57
NPAS3-213ENST00000552874 ACIN1Q9UKV3 1341 aaKnown RBP11.49□□□□□ -0.57
NPAS3-213ENST00000552874 DHX57Q6P158 1386 aaKnown RBP11.49□□□□□ -0.57
NPAS3-213ENST00000552874 SPATA31E1Q6ZUB1 1445 aa11.49□□□□□ -0.57
NPAS3-213ENST00000552874 PKD2Q13563 968 aa11.48□□□□□ -0.57
NPAS3-213ENST00000552874 MPHOSPH9Q99550 1183 aa11.48□□□□□ -0.57
NPAS3-213ENST00000552874 ANKRD30BQ9BXX2 1392 aa11.48□□□□□ -0.57
NPAS3-213ENST00000552874 STRCP1A6NGW2 1772 aa11.48□□□□□ -0.57
NPAS3-213ENST00000552874 MED14O60244 1454 aa11.47□□□□□ -0.57
NPAS3-213ENST00000552874 SLC4A1APQ9BWU0 796 aaKnown RBP11.46□□□□□ -0.57
NPAS3-213ENST00000552874 TRIM52Q96A61 297 aa11.45□□□□□ -0.58
NPAS3-213ENST00000552874 SETBP1Q9Y6X0 1596 aa11.45□□□□□ -0.58
NPAS3-213ENST00000552874 IDI1Q13907 227 aa11.44□□□□□ -0.58
NPAS3-213ENST00000552874 SCAF11Q99590 1463 aaKnown RBP11.44□□□□□ -0.58
NPAS3-213ENST00000552874 CHD2O14647 1828 aaKnown RBP11.43□□□□□ -0.58
NPAS3-213ENST00000552874 XIRP1Q702N8 1843 aaKnown RBP11.43□□□□□ -0.58
NPAS3-213ENST00000552874 CCDC144AA2RUR9 1427 aa11.43□□□□□ -0.58
NPAS3-213ENST00000552874 TMEM2Q9UHN6 1383 aa11.42□□□□□ -0.58
NPAS3-213ENST00000552874 DIP2AQ14689 1571 aa11.42□□□□□ -0.58
NPAS3-213ENST00000552874 NWD1Q149M9 1564 aa11.42□□□□□ -0.58
NPAS3-213ENST00000552874 HSPA2P54652 639 aa11.42□□□□□ -0.58
NPAS3-213ENST00000552874 SLC52A1Q9NWF4 448 aa11.42□□□□□ -0.58
NPAS3-213ENST00000552874 NRXN1Q9ULB1 1477 aa11.42□□□□□ -0.58
NPAS3-213ENST00000552874 LAMC1P11047 1609 aa11.41□□□□□ -0.58
NPAS3-213ENST00000552874 XRN1Q8IZH2 1706 aaKnown RBP11.4□□□□□ -0.58
NPAS3-213ENST00000552874 MYOM2P54296 1465 aa11.4□□□□□ -0.58
NPAS3-213ENST00000552874 RIMS2Q9UQ26 1411 aa11.4□□□□□ -0.58
NPAS3-213ENST00000552874 ASXL1Q8IXJ9 1541 aa11.4□□□□□ -0.59
NPAS3-213ENST00000552874 KNDC1Q76NI1 1749 aa11.39□□□□□ -0.59
NPAS3-213ENST00000552874 PCGF6Q9BYE7 350 aa11.39□□□□□ -0.59
NPAS3-213ENST00000552874 KIAA1210Q9ULL0 1709 aa11.39□□□□□ -0.59
NPAS3-213ENST00000552874 LTBP4Q8N2S1 1624 aa11.38□□□□□ -0.59
NPAS3-213ENST00000552874 NPHP4O75161 1426 aaPredicted RBP11.37□□□□□ -0.59
NPAS3-213ENST00000552874 ADAMTS13Q76LX8 1427 aa11.37□□□□□ -0.59
NPAS3-213ENST00000552874 LTKP29376 864 aa11.36□□□□□ -0.59
NPAS3-213ENST00000552874 PLEKHG1Q9ULL1 1385 aa11.36□□□□□ -0.59
NPAS3-213ENST00000552874 TRPM1Q7Z4N2 1603 aa11.35□□□□□ -0.59
NPAS3-213ENST00000552874 ALKQ9UM73 1620 aa11.35□□□□□ -0.59
NPAS3-213ENST00000552874 PIK3C2GO75747 1445 aa11.35□□□□□ -0.59
NPAS3-213ENST00000552874 THEMISQ8N1K5 641 aaPredicted RBP11.34□□□□□ -0.59
NPAS3-213ENST00000552874 PRAG1Q86YV5 1406 aa11.34□□□□□ -0.59
NPAS3-213ENST00000552874 NCKAP5LQ9HCH0 1330 aa11.33□□□□□ -0.6
NPAS3-213ENST00000552874 ADGRB1O14514 1584 aa11.33□□□□□ -0.6
NPAS3-213ENST00000552874 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
NPAS3-213ENST00000552874 ARHGEF28Q8N1W1 1705 aaKnown RBP11.32□□□□□ -0.6
NPAS3-213ENST00000552874 CPS1P31327 1500 aa11.31□□□□□ -0.6
NPAS3-213ENST00000552874 NALCNQ8IZF0 1738 aa11.3□□□□□ -0.6
NPAS3-213ENST00000552874 PTPRUQ92729 1446 aa11.29□□□□□ -0.6
NPAS3-213ENST00000552874 NKTRP30414 1462 aaKnown RBP11.29□□□□□ -0.6
NPAS3-213ENST00000552874 RPGRIP1LQ68CZ1 1315 aa11.29□□□□□ -0.6
NPAS3-213ENST00000552874 ANKLE2Q86XL3 938 aa11.28□□□□□ -0.6
NPAS3-213ENST00000552874 TXNDC2Q86VQ3 553 aa11.27□□□□□ -0.61
NPAS3-213ENST00000552874 ADGRF5Q8IZF2 1346 aa11.27□□□□□ -0.61
NPAS3-213ENST00000552874 CLSPNQ9HAW4 1339 aa11.27□□□□□ -0.61
NPAS3-213ENST00000552874 SLC4A2P04920 1241 aa11.26□□□□□ -0.61
NPAS3-213ENST00000552874 SIN3AQ96ST3 1273 aa11.26□□□□□ -0.61
NPAS3-213ENST00000552874 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
NPAS3-213ENST00000552874 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.25□□□□□ -0.61
NPAS3-213ENST00000552874 STAG3Q9UJ98 1225 aa11.25□□□□□ -0.61
NPAS3-213ENST00000552874 PIK3R4Q99570 1358 aa11.25□□□□□ -0.61
NPAS3-213ENST00000552874 TECPR2O15040 1411 aa11.25□□□□□ -0.61
NPAS3-213ENST00000552874 IQSEC2Q5JU85 1478 aa11.25□□□□□ -0.61
NPAS3-213ENST00000552874 LRRC7Q96NW7 1537 aa11.25□□□□□ -0.61
NPAS3-213ENST00000552874 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.24□□□□□ -0.61
NPAS3-213ENST00000552874 NUTM2DQ5VT03 806 aaPredicted RBP11.24□□□□□ -0.61
NPAS3-213ENST00000552874 METP08581 1390 aa11.24□□□□□ -0.61
NPAS3-213ENST00000552874 PTCH1Q13635 1447 aa11.24□□□□□ -0.61
NPAS3-213ENST00000552874 DLC1Q96QB1 1528 aa11.24□□□□□ -0.61
NPAS3-213ENST00000552874 EID1Q9Y6B2 187 aa11.23□□□□□ -0.61
NPAS3-213ENST00000552874 ZNF335Q9H4Z2 1342 aaPredicted RBP11.23□□□□□ -0.61
NPAS3-213ENST00000552874 RALGAPBQ86X10 1494 aa11.23□□□□□ -0.61
NPAS3-213ENST00000552874 ADGRB2O60241 1585 aa11.22□□□□□ -0.61
NPAS3-213ENST00000552874 ZNF326Q5BKZ1 582 aaKnown RBP11.22□□□□□ -0.61
NPAS3-213ENST00000552874 QRICH2Q9H0J4 1663 aa11.21□□□□□ -0.61
NPAS3-213ENST00000552874 RGL3Q3MIN7 710 aa11.21□□□□□ -0.61
NPAS3-213ENST00000552874 L3MBTL2Q969R5 705 aa11.2□□□□□ -0.62
NPAS3-213ENST00000552874 TBX22Q9Y458 520 aa11.2□□□□□ -0.62
NPAS3-213ENST00000552874 FMN2Q9NZ56 1722 aa11.2□□□□□ -0.62
NPAS3-213ENST00000552874 YTHDC2Q9H6S0 1430 aaKnown RBP11.19□□□□□ -0.62
NPAS3-213ENST00000552874 GPRASP1Q5JY77 1395 aa11.19□□□□□ -0.62
NPAS3-213ENST00000552874 VGFO15240 615 aaPredicted RBP11.19□□□□□ -0.62
NPAS3-213ENST00000552874 SLC26A8Q96RN1 970 aa11.19□□□□□ -0.62
NPAS3-213ENST00000552874 CDC42BPGQ6DT37 1551 aa11.19□□□□□ -0.62
NPAS3-213ENST00000552874 RGPD8O14715 1765 aaPredicted RBP11.18□□□□□ -0.62
NPAS3-213ENST00000552874 PPP1R15AO75807 674 aaPredicted RBP11.18□□□□□ -0.62
NPAS3-213ENST00000552874 TOPAZ1Q8N9V7 1692 aa11.17□□□□□ -0.62
NPAS3-213ENST00000552874 LRPPRCP42704 1394 aaKnown RBP11.17□□□□□ -0.62
NPAS3-213ENST00000552874 USP32Q8NFA0 1604 aa11.17□□□□□ -0.62
NPAS3-213ENST00000552874 HDGFP51858 240 aaKnown RBP11.17□□□□□ -0.62
NPAS3-213ENST00000552874 STAC3Q96MF2 364 aa11.17□□□□□ -0.62
NPAS3-213ENST00000552874 C14orf93Q9H972 538 aaKnown RBP11.17□□□□□ -0.62
NPAS3-213ENST00000552874 ROBO2Q9HCK4 1378 aa11.16□□□□□ -0.62
NPAS3-213ENST00000552874 DCAF11Q8TEB1 546 aa11.16□□□□□ -0.62
NPAS3-213ENST00000552874 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
NPAS3-213ENST00000552874 KCNA6P17658 529 aa11.15□□□□□ -0.62
NPAS3-213ENST00000552874 NBPF8Q3BBV2 869 aa11.15□□□□□ -0.62
NPAS3-213ENST00000552874 FAM135BQ49AJ0 1406 aa11.15□□□□□ -0.62
NPAS3-213ENST00000552874 ABCC11Q96J66 1382 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms