RNA–Protein interactions for RNA: ENST00000552873.1

RDH12-204, Transcript of retinol dehydrogenase 12, humanhuman

TSL 5

Gene RDH12, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH12-204ENST00000552873 GCC2Q8IWJ2 1684 aa20.54■□□□□ 0.88
RDH12-204ENST00000552873 NUP155O75694 1391 aa20.52■□□□□ 0.88
RDH12-204ENST00000552873 PPP1R15AO75807 674 aaPredicted RBP20.51■□□□□ 0.87
RDH12-204ENST00000552873 CHGAP10645 457 aaKnown RBP20.51■□□□□ 0.87
RDH12-204ENST00000552873 PROSER2Q86WR7 435 aaPredicted RBP20.51■□□□□ 0.87
RDH12-204ENST00000552873 TMEM94Q12767 1356 aa20.5■□□□□ 0.87
RDH12-204ENST00000552873 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
RDH12-204ENST00000552873 RIMS2Q9UQ26 1411 aa20.5■□□□□ 0.87
RDH12-204ENST00000552873 ZFYVE9O95405 1425 aa20.49■□□□□ 0.87
RDH12-204ENST00000552873 IQGAP3Q86VI3 1631 aa20.49■□□□□ 0.87
RDH12-204ENST00000552873 XIRP1Q702N8 1843 aaKnown RBP20.48■□□□□ 0.87
RDH12-204ENST00000552873 E9PCH4 1651 aa20.48■□□□□ 0.87
RDH12-204ENST00000552873 PLEKHG1Q9ULL1 1385 aa20.48■□□□□ 0.87
RDH12-204ENST00000552873 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.48■□□□□ 0.87
RDH12-204ENST00000552873 TMEM131LA2VDJ0 1609 aa20.48■□□□□ 0.87
RDH12-204ENST00000552873 MYO5BQ9ULV0 1848 aa20.47■□□□□ 0.87
RDH12-204ENST00000552873 MED1Q15648 1581 aaPredicted RBP20.46■□□□□ 0.87
RDH12-204ENST00000552873 RBM33Q96EV2 1170 aaKnown RBP20.45■□□□□ 0.86
RDH12-204ENST00000552873 TBX22Q9Y458 520 aa20.44■□□□□ 0.86
RDH12-204ENST00000552873 NKTRP30414 1462 aaKnown RBP20.43■□□□□ 0.86
RDH12-204ENST00000552873 NUTM2DQ5VT03 806 aaPredicted RBP20.42■□□□□ 0.86
RDH12-204ENST00000552873 FAM135BQ49AJ0 1406 aa20.42■□□□□ 0.86
RDH12-204ENST00000552873 NWD1Q149M9 1564 aa20.42■□□□□ 0.86
RDH12-204ENST00000552873 PHF23Q9BUL5 403 aaPredicted RBP20.4■□□□□ 0.86
RDH12-204ENST00000552873 SETD5Q9C0A6 1442 aa20.4■□□□□ 0.86
RDH12-204ENST00000552873 HFM1A2PYH4 1435 aa20.39■□□□□ 0.85
RDH12-204ENST00000552873 MSH6P52701 1360 aa20.39■□□□□ 0.85
RDH12-204ENST00000552873 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
RDH12-204ENST00000552873 RAB3GAP2Q9H2M9 1393 aa20.36■□□□□ 0.85
RDH12-204ENST00000552873 NAIPQ13075 1403 aa20.36■□□□□ 0.85
RDH12-204ENST00000552873 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
RDH12-204ENST00000552873 SLAIN2Q9P270 581 aa20.34■□□□□ 0.85
RDH12-204ENST00000552873 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
RDH12-204ENST00000552873 DIP2AQ14689 1571 aa20.33■□□□□ 0.84
RDH12-204ENST00000552873 HRCP23327 699 aa20.32■□□□□ 0.84
RDH12-204ENST00000552873 ZNF326Q5BKZ1 582 aaKnown RBP20.32■□□□□ 0.84
RDH12-204ENST00000552873 C14orf37Q86TY3 774 aa20.32■□□□□ 0.84
RDH12-204ENST00000552873 NCOA3Q9Y6Q9 1424 aa20.32■□□□□ 0.84
RDH12-204ENST00000552873 SPHKAPQ2M3C7 1700 aa20.31■□□□□ 0.84
RDH12-204ENST00000552873 ROBO1Q9Y6N7 1651 aa20.3■□□□□ 0.84
RDH12-204ENST00000552873 TRIM52Q96A61 297 aa20.29■□□□□ 0.84
RDH12-204ENST00000552873 AMOTL2Q9Y2J4 779 aa20.29■□□□□ 0.84
RDH12-204ENST00000552873 TRPM2O94759 1503 aa20.28■□□□□ 0.84
RDH12-204ENST00000552873 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.84
RDH12-204ENST00000552873 C19orf44Q9H6X5 657 aa20.27■□□□□ 0.84
RDH12-204ENST00000552873 DHX57Q6P158 1386 aaKnown RBP20.26■□□□□ 0.83
RDH12-204ENST00000552873 CADPS2Q86UW7 1296 aa20.26■□□□□ 0.83
RDH12-204ENST00000552873 ATF3P18847 181 aa20.25■□□□□ 0.83
RDH12-204ENST00000552873 PTPRUQ92729 1446 aa20.24■□□□□ 0.83
RDH12-204ENST00000552873 CLTCL1P53675 1640 aa20.23■□□□□ 0.83
RDH12-204ENST00000552873 SETBP1Q9Y6X0 1596 aa20.22■□□□□ 0.83
RDH12-204ENST00000552873 SLC4A1APQ9BWU0 796 aaKnown RBP20.22■□□□□ 0.83
RDH12-204ENST00000552873 RGS17Q9UGC6 210 aaPredicted RBP20.22■□□□□ 0.83
RDH12-204ENST00000552873 NRXN3Q9Y4C0 1643 aa20.2■□□□□ 0.82
RDH12-204ENST00000552873 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.82
RDH12-204ENST00000552873 PHLPP1O60346 1717 aa20.19■□□□□ 0.82
RDH12-204ENST00000552873 METP08581 1390 aa20.19■□□□□ 0.82
RDH12-204ENST00000552873 JCADQ9P266 1359 aa20.19■□□□□ 0.82
RDH12-204ENST00000552873 KIF1BO60333 1816 aa20.18■□□□□ 0.82
RDH12-204ENST00000552873 NEXMIFQ5QGS0 1516 aa20.18■□□□□ 0.82
RDH12-204ENST00000552873 ZEB1P37275 1124 aaPredicted RBP20.18■□□□□ 0.82
RDH12-204ENST00000552873 VGFO15240 615 aaPredicted RBP20.17■□□□□ 0.82
RDH12-204ENST00000552873 XRN1Q8IZH2 1706 aaKnown RBP20.16■□□□□ 0.82
RDH12-204ENST00000552873 RPGRIP1LQ68CZ1 1315 aa20.15■□□□□ 0.82
RDH12-204ENST00000552873 DCCP43146 1447 aa20.14■□□□□ 0.81
RDH12-204ENST00000552873 CLSPNQ9HAW4 1339 aa20.14■□□□□ 0.81
RDH12-204ENST00000552873 COL16A1Q07092 1604 aaPredicted RBP20.13■□□□□ 0.81
RDH12-204ENST00000552873 ACIN1Q9UKV3 1341 aaKnown RBP20.12■□□□□ 0.81
RDH12-204ENST00000552873 BRINP3Q76B58 766 aa20.12■□□□□ 0.81
RDH12-204ENST00000552873 POTEAQ6S8J7 498 aa20.11■□□□□ 0.81
RDH12-204ENST00000552873 AHDC1Q5TGY3 1603 aaPredicted RBP20.1■□□□□ 0.81
RDH12-204ENST00000552873 FOXD1Q16676 465 aa20.1■□□□□ 0.81
RDH12-204ENST00000552873 SPATA31A6Q5VVP1 1343 aa20.09■□□□□ 0.81
RDH12-204ENST00000552873 ADGRL3Q9HAR2 1447 aa20.08■□□□□ 0.8
RDH12-204ENST00000552873 MPHOSPH9Q99550 1183 aa20.07■□□□□ 0.8
RDH12-204ENST00000552873 MST1RQ04912 1400 aa20.07■□□□□ 0.8
RDH12-204ENST00000552873 MEX3CQ5U5Q3 659 aaKnown RBP20.05■□□□□ 0.8
RDH12-204ENST00000552873 CCDC144AA2RUR9 1427 aa20.04■□□□□ 0.8
RDH12-204ENST00000552873 ASXL1Q8IXJ9 1541 aa20.04■□□□□ 0.8
RDH12-204ENST00000552873 PPLO60437 1756 aa20.03■□□□□ 0.8
RDH12-204ENST00000552873 PTCH1Q13635 1447 aa20.02■□□□□ 0.8
RDH12-204ENST00000552873 RGL3Q3MIN7 710 aa20.02■□□□□ 0.8
RDH12-204ENST00000552873 ROBO2Q9HCK4 1378 aa20.02■□□□□ 0.8
RDH12-204ENST00000552873 LRP6O75581 1613 aa20.02■□□□□ 0.79
RDH12-204ENST00000552873 SHPRHQ149N8 1683 aa20.01■□□□□ 0.79
RDH12-204ENST00000552873 LRRC59Q96AG4 307 aaKnown RBP20.01■□□□□ 0.79
RDH12-204ENST00000552873 SETD1AO15047 1707 aaKnown RBP20.01■□□□□ 0.79
RDH12-204ENST00000552873 NALCNQ8IZF0 1738 aa20■□□□□ 0.79
RDH12-204ENST00000552873 NUTM2BA6NNL0 878 aaPredicted RBP20■□□□□ 0.79
RDH12-204ENST00000552873 NUTM2EB1AL46 878 aaPredicted RBP20■□□□□ 0.79
RDH12-204ENST00000552873 NUTM2AQ8IVF1 878 aaPredicted RBP20■□□□□ 0.79
RDH12-204ENST00000552873 ADGRF5Q8IZF2 1346 aa20■□□□□ 0.79
RDH12-204ENST00000552873 ZNF772Q68DY9 489 aaPredicted RBP19.99■□□□□ 0.79
RDH12-204ENST00000552873 PRAG1Q86YV5 1406 aa19.99■□□□□ 0.79
RDH12-204ENST00000552873 DDX17Q92841 729 aaKnown RBP19.98■□□□□ 0.79
RDH12-204ENST00000552873 SPATA31E1Q6ZUB1 1445 aa19.98■□□□□ 0.79
RDH12-204ENST00000552873 C1orf167Q5SNV9 1468 aa19.98■□□□□ 0.79
RDH12-204ENST00000552873 ANKRD30BQ9BXX2 1392 aa19.97■□□□□ 0.79
RDH12-204ENST00000552873 NHSL1Q5SYE7 1610 aa19.97■□□□□ 0.79
RDH12-204ENST00000552873 ORAI2Q96SN7 254 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms