RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 ABCC5O15440 1437 aa18.12■□□□□ 0.49
SUPT16H-202ENST00000552829 NCOA3Q9Y6Q9 1424 aa18.12■□□□□ 0.49
SUPT16H-202ENST00000552829 CROCC2H7BZ55 1655 aa18.12■□□□□ 0.49
SUPT16H-202ENST00000552829 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
SUPT16H-202ENST00000552829 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
SUPT16H-202ENST00000552829 TRIM52Q96A61 297 aa18.11■□□□□ 0.49
SUPT16H-202ENST00000552829 RRP7BPQ9NSQ0 103 aa18.11■□□□□ 0.49
SUPT16H-202ENST00000552829 AHDC1Q5TGY3 1603 aaPredicted RBP18.11■□□□□ 0.49
SUPT16H-202ENST00000552829 CDK12Q9NYV4 1490 aaPredicted RBP18.1■□□□□ 0.49
SUPT16H-202ENST00000552829 ZFYVE9O95405 1425 aa18.1■□□□□ 0.49
SUPT16H-202ENST00000552829 KANK1Q14678 1352 aa18.1■□□□□ 0.49
SUPT16H-202ENST00000552829 KANK4Q5T7N3 995 aaPredicted RBP18.1■□□□□ 0.49
SUPT16H-202ENST00000552829 SLC52A1Q9NWF4 448 aa18.09■□□□□ 0.49
SUPT16H-202ENST00000552829 PLEKHG1Q9ULL1 1385 aa18.08■□□□□ 0.49
SUPT16H-202ENST00000552829 MYO5BQ9ULV0 1848 aa18.08■□□□□ 0.48
SUPT16H-202ENST00000552829 RXRBP28702 533 aa18.07■□□□□ 0.48
SUPT16H-202ENST00000552829 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.06■□□□□ 0.48
SUPT16H-202ENST00000552829 SRCAPQ6ZRS2 3230 aa18.06■□□□□ 0.48
SUPT16H-202ENST00000552829 MEX3CQ5U5Q3 659 aaKnown RBP18.06■□□□□ 0.48
SUPT16H-202ENST00000552829 TBX22Q9Y458 520 aa18.06■□□□□ 0.48
SUPT16H-202ENST00000552829 DIP2AQ14689 1571 aa18.05■□□□□ 0.48
SUPT16H-202ENST00000552829 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
SUPT16H-202ENST00000552829 BCANQ96GW7 911 aa18.03■□□□□ 0.48
SUPT16H-202ENST00000552829 DAPK1P53355 1430 aa18.02■□□□□ 0.48
SUPT16H-202ENST00000552829 CADPS2Q86UW7 1296 aa18.02■□□□□ 0.48
SUPT16H-202ENST00000552829 C19orf44Q9H6X5 657 aa18.02■□□□□ 0.48
SUPT16H-202ENST00000552829 RIMS2Q9UQ26 1411 aa18.02■□□□□ 0.48
SUPT16H-202ENST00000552829 TMEM131LA2VDJ0 1609 aa18.01■□□□□ 0.47
SUPT16H-202ENST00000552829 PTPN23Q9H3S7 1636 aa18.01■□□□□ 0.47
SUPT16H-202ENST00000552829 ADAMTS13Q76LX8 1427 aa18■□□□□ 0.47
SUPT16H-202ENST00000552829 RPRD2Q5VT52 1461 aaKnown RBP18■□□□□ 0.47
SUPT16H-202ENST00000552829 BRINP3Q76B58 766 aa17.99■□□□□ 0.47
SUPT16H-202ENST00000552829 GCC2Q8IWJ2 1684 aa17.99■□□□□ 0.47
SUPT16H-202ENST00000552829 AFF2P51816 1311 aa17.98■□□□□ 0.47
SUPT16H-202ENST00000552829 HDGFP51858 240 aaKnown RBP17.98■□□□□ 0.47
SUPT16H-202ENST00000552829 PIK3R4Q99570 1358 aa17.98■□□□□ 0.47
SUPT16H-202ENST00000552829 ANKRD30AQ9BXX3 1397 aa17.98■□□□□ 0.47
SUPT16H-202ENST00000552829 ATF3P18847 181 aa17.97■□□□□ 0.47
SUPT16H-202ENST00000552829 SETD5Q9C0A6 1442 aa17.97■□□□□ 0.47
SUPT16H-202ENST00000552829 NUTM2BA6NNL0 878 aaPredicted RBP17.95■□□□□ 0.46
SUPT16H-202ENST00000552829 NUTM2EB1AL46 878 aaPredicted RBP17.95■□□□□ 0.46
SUPT16H-202ENST00000552829 PPP1R15AO75807 674 aaPredicted RBP17.95■□□□□ 0.46
SUPT16H-202ENST00000552829 C14orf37Q86TY3 774 aa17.95■□□□□ 0.46
SUPT16H-202ENST00000552829 NUTM2AQ8IVF1 878 aaPredicted RBP17.95■□□□□ 0.46
SUPT16H-202ENST00000552829 RGS12O14924 1447 aa17.95■□□□□ 0.46
SUPT16H-202ENST00000552829 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.94■□□□□ 0.46
SUPT16H-202ENST00000552829 CHIC2Q9UKJ5 165 aa17.94■□□□□ 0.46
SUPT16H-202ENST00000552829 NHSL1Q5SYE7 1610 aa17.93■□□□□ 0.46
SUPT16H-202ENST00000552829 DCCP43146 1447 aa17.92■□□□□ 0.46
SUPT16H-202ENST00000552829 PTPRUQ92729 1446 aa17.92■□□□□ 0.46
SUPT16H-202ENST00000552829 RBM6P78332 1123 aaKnown RBP17.92■□□□□ 0.46
SUPT16H-202ENST00000552829 ADGRL2O95490 1459 aa17.92■□□□□ 0.46
SUPT16H-202ENST00000552829 ASXL1Q8IXJ9 1541 aa17.92■□□□□ 0.46
SUPT16H-202ENST00000552829 QTRT2Q9H974 415 aaKnown RBP17.91■□□□□ 0.46
SUPT16H-202ENST00000552829 KCNA4P22459 653 aa17.9■□□□□ 0.46
SUPT16H-202ENST00000552829 AMOTL2Q9Y2J4 779 aa17.89■□□□□ 0.45
SUPT16H-202ENST00000552829 MST1RQ04912 1400 aa17.89■□□□□ 0.45
SUPT16H-202ENST00000552829 TRPM2O94759 1503 aa17.88■□□□□ 0.45
SUPT16H-202ENST00000552829 LRRC59Q96AG4 307 aaKnown RBP17.88■□□□□ 0.45
SUPT16H-202ENST00000552829 PNPLA6Q8IY17 1366 aa17.87■□□□□ 0.45
SUPT16H-202ENST00000552829 XRN1Q8IZH2 1706 aaKnown RBP17.86■□□□□ 0.45
SUPT16H-202ENST00000552829 NUTM2DQ5VT03 806 aaPredicted RBP17.86■□□□□ 0.45
SUPT16H-202ENST00000552829 C8orf37Q96NL8 207 aa17.86■□□□□ 0.45
SUPT16H-202ENST00000552829 UNC13BO14795 1591 aa17.86■□□□□ 0.45
SUPT16H-202ENST00000552829 ANKRD50Q9ULJ7 1429 aa17.85■□□□□ 0.45
SUPT16H-202ENST00000552829 E9PCH4 1651 aa17.83■□□□□ 0.45
SUPT16H-202ENST00000552829 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.44
SUPT16H-202ENST00000552829 ATAD2Q6PL18 1390 aa17.82■□□□□ 0.44
SUPT16H-202ENST00000552829 CHGAP10645 457 aaKnown RBP17.82■□□□□ 0.44
SUPT16H-202ENST00000552829 DDX17Q92841 729 aaKnown RBP17.81■□□□□ 0.44
SUPT16H-202ENST00000552829 NGLY1Q96IV0 654 aa17.81■□□□□ 0.44
SUPT16H-202ENST00000552829 LAMC1P11047 1609 aa17.8■□□□□ 0.44
SUPT16H-202ENST00000552829 EP400Q96L91 3159 aa17.8■□□□□ 0.44
SUPT16H-202ENST00000552829 SETBP1Q9Y6X0 1596 aa17.79■□□□□ 0.44
SUPT16H-202ENST00000552829 ZRANB1Q9UGI0 708 aa17.78■□□□□ 0.44
SUPT16H-202ENST00000552829 ADGRL3Q9HAR2 1447 aa17.78■□□□□ 0.44
SUPT16H-202ENST00000552829 LOC105371045A0A1W2PR82 267 aa17.77■□□□□ 0.44
SUPT16H-202ENST00000552829 FNBP4Q8N3X1 1017 aaPredicted RBP17.76■□□□□ 0.43
SUPT16H-202ENST00000552829 ATRNO75882 1429 aa17.75■□□□□ 0.43
SUPT16H-202ENST00000552829 ADAMTS2O95450 1211 aa17.75■□□□□ 0.43
SUPT16H-202ENST00000552829 METP08581 1390 aa17.75■□□□□ 0.43
SUPT16H-202ENST00000552829 NALCNQ8IZF0 1738 aa17.75■□□□□ 0.43
SUPT16H-202ENST00000552829 IQGAP3Q86VI3 1631 aa17.74■□□□□ 0.43
SUPT16H-202ENST00000552829 USP21Q9UK80 565 aa17.74■□□□□ 0.43
SUPT16H-202ENST00000552829 TRPC5Q9UL62 973 aaPredicted RBP17.74■□□□□ 0.43
SUPT16H-202ENST00000552829 SOS2Q07890 1332 aaPredicted RBP17.73■□□□□ 0.43
SUPT16H-202ENST00000552829 CCDC125Q86Z20 511 aa17.73■□□□□ 0.43
SUPT16H-202ENST00000552829 C1orf167Q5SNV9 1468 aa17.73■□□□□ 0.43
SUPT16H-202ENST00000552829 PTCH1Q13635 1447 aa17.72■□□□□ 0.43
SUPT16H-202ENST00000552829 APLP2Q06481 763 aa17.7■□□□□ 0.42
SUPT16H-202ENST00000552829 COL22A1Q8NFW1 1626 aaPredicted RBP17.69■□□□□ 0.42
SUPT16H-202ENST00000552829 BCL9LQ86UU0 1499 aa17.68■□□□□ 0.42
SUPT16H-202ENST00000552829 FAM50AQ14320 339 aaKnown RBP17.67■□□□□ 0.42
SUPT16H-202ENST00000552829 ORAI2Q96SN7 254 aa17.66■□□□□ 0.42
SUPT16H-202ENST00000552829 MYOM2P54296 1465 aa17.66■□□□□ 0.42
SUPT16H-202ENST00000552829 MARF1Q9Y4F3 1742 aaKnown RBP17.64■□□□□ 0.41
SUPT16H-202ENST00000552829 NUP155O75694 1391 aa17.64■□□□□ 0.41
SUPT16H-202ENST00000552829 ROCK1Q13464 1354 aa17.64■□□□□ 0.41
SUPT16H-202ENST00000552829 SPHKAPQ2M3C7 1700 aa17.64■□□□□ 0.41
SUPT16H-202ENST00000552829 NEXMIFQ5QGS0 1516 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms