RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 PLPPR3Q6T4P5 718 aa13.95□□□□□ -0.18
RFX4-210ENST00000552773 KNSTRNQ9Y448 316 aa13.95□□□□□ -0.18
RFX4-210ENST00000552773 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
RFX4-210ENST00000552773 SYNMO15061 1565 aa13.94□□□□□ -0.18
RFX4-210ENST00000552773 MAP3K4Q9Y6R4 1608 aa13.94□□□□□ -0.18
RFX4-210ENST00000552773 PANK3Q9H999 370 aa13.93□□□□□ -0.18
RFX4-210ENST00000552773 TSHZ2Q9NRE2 1034 aa13.93□□□□□ -0.18
RFX4-210ENST00000552773 DISP3Q9P2K9 1392 aa13.93□□□□□ -0.18
RFX4-210ENST00000552773 SBNO2Q9Y2G9 1366 aa13.92□□□□□ -0.18
RFX4-210ENST00000552773 SETBP1Q9Y6X0 1596 aa13.91□□□□□ -0.18
RFX4-210ENST00000552773 NRXN1Q9ULB1 1477 aa13.9□□□□□ -0.18
RFX4-210ENST00000552773 ZC3H13Q5T200 1668 aaKnown RBP13.9□□□□□ -0.18
RFX4-210ENST00000552773 GLI2P10070 1586 aa13.9□□□□□ -0.19
RFX4-210ENST00000552773 PPRC1Q5VV67 1664 aaKnown RBP13.89□□□□□ -0.19
RFX4-210ENST00000552773 RNF123Q5XPI4 1314 aa13.89□□□□□ -0.19
RFX4-210ENST00000552773 ADGRB3O60242 1522 aa13.89□□□□□ -0.19
RFX4-210ENST00000552773 NGEFQ8N5V2 710 aa13.88□□□□□ -0.19
RFX4-210ENST00000552773 KDM5AP29375 1690 aaKnown RBP13.88□□□□□ -0.19
RFX4-210ENST00000552773 ARHGAP31Q2M1Z3 1444 aa13.88□□□□□ -0.19
RFX4-210ENST00000552773 IFT172Q9UG01 1749 aa13.88□□□□□ -0.19
RFX4-210ENST00000552773 PUS7Q96PZ0 661 aaKnown RBP13.87□□□□□ -0.19
RFX4-210ENST00000552773 ASXL1Q8IXJ9 1541 aa13.87□□□□□ -0.19
RFX4-210ENST00000552773 PPP6R1Q9UPN7 881 aa13.86□□□□□ -0.19
RFX4-210ENST00000552773 MYO3AQ8NEV4 1616 aa13.86□□□□□ -0.19
RFX4-210ENST00000552773 VGFO15240 615 aaPredicted RBP13.85□□□□□ -0.19
RFX4-210ENST00000552773 CNGB1Q14028 1251 aaPredicted RBP13.85□□□□□ -0.19
RFX4-210ENST00000552773 PIK3C2GO75747 1445 aa13.85□□□□□ -0.19
RFX4-210ENST00000552773 ABCC3O15438 1527 aa13.85□□□□□ -0.19
RFX4-210ENST00000552773 BLMP54132 1417 aaPredicted RBP13.85□□□□□ -0.19
RFX4-210ENST00000552773 NPATQ14207 1427 aa13.85□□□□□ -0.19
RFX4-210ENST00000552773 WDR43Q15061 677 aaKnown RBP eCLIP13.85□□□□□ -0.19
RFX4-210ENST00000552773 SLC52A1Q9NWF4 448 aa13.85□□□□□ -0.19
RFX4-210ENST00000552773 CC2D1BQ5T0F9 858 aaKnown RBP13.84□□□□□ -0.19
RFX4-210ENST00000552773 GGT6Q6P531 493 aa13.84□□□□□ -0.19
RFX4-210ENST00000552773 ABCA6Q8N139 1617 aa13.84□□□□□ -0.19
RFX4-210ENST00000552773 FRMPD1Q5SYB0 1578 aa13.83□□□□□ -0.19
RFX4-210ENST00000552773 CAMSAP1Q5T5Y3 1602 aa13.83□□□□□ -0.2
RFX4-210ENST00000552773 NOS1P29475 1434 aa13.83□□□□□ -0.2
RFX4-210ENST00000552773 C14orf93Q9H972 538 aaKnown RBP13.82□□□□□ -0.2
RFX4-210ENST00000552773 CENPJQ9HC77 1338 aaPredicted RBP13.82□□□□□ -0.2
RFX4-210ENST00000552773 CFAP70Q5T0N1 1121 aa13.81□□□□□ -0.2
RFX4-210ENST00000552773 ZFYVE9O95405 1425 aa13.81□□□□□ -0.2
RFX4-210ENST00000552773 DIP2CQ9Y2E4 1556 aa13.8□□□□□ -0.2
RFX4-210ENST00000552773 PPLO60437 1756 aa13.8□□□□□ -0.2
RFX4-210ENST00000552773 CHGAP10645 457 aaKnown RBP13.8□□□□□ -0.2
RFX4-210ENST00000552773 AMER1Q5JTC6 1135 aaPredicted RBP13.8□□□□□ -0.2
RFX4-210ENST00000552773 ADGRF5Q8IZF2 1346 aa13.8□□□□□ -0.2
RFX4-210ENST00000552773 RICTORQ6R327 1708 aa13.79□□□□□ -0.2
RFX4-210ENST00000552773 PPP2R1AP30153 589 aa13.79□□□□□ -0.2
RFX4-210ENST00000552773 RCAN3Q9UKA8 241 aa13.79□□□□□ -0.2
RFX4-210ENST00000552773 PIK3C2BO00750 1634 aa13.78□□□□□ -0.2
RFX4-210ENST00000552773 NINLQ9Y2I6 1382 aa13.78□□□□□ -0.2
RFX4-210ENST00000552773 CCDC136Q96JN2 1154 aa13.78□□□□□ -0.2
RFX4-210ENST00000552773 MROH2AA6NES4 1674 aa13.77□□□□□ -0.2
RFX4-210ENST00000552773 UGGT1Q9NYU2 1555 aa13.77□□□□□ -0.2
RFX4-210ENST00000552773 ERVK-7P63135 1459 aa13.77□□□□□ -0.2
RFX4-210ENST00000552773 IRX6P78412 446 aaPredicted RBP13.77□□□□□ -0.21
RFX4-210ENST00000552773 REREQ9P2R6 1566 aa13.77□□□□□ -0.21
RFX4-210ENST00000552773 RBM19Q9Y4C8 960 aaKnown RBP13.76□□□□□ -0.21
RFX4-210ENST00000552773 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.75□□□□□ -0.21
RFX4-210ENST00000552773 MYOM1P52179 1685 aa13.75□□□□□ -0.21
RFX4-210ENST00000552773 EVC2Q86UK5 1308 aa13.75□□□□□ -0.21
RFX4-210ENST00000552773 RRP1P56182 461 aaKnown RBP13.75□□□□□ -0.21
RFX4-210ENST00000552773 NSD2O96028 1365 aa13.74□□□□□ -0.21
RFX4-210ENST00000552773 RAPGEF3O95398 923 aa13.74□□□□□ -0.21
RFX4-210ENST00000552773 FANCIQ9NVI1 1328 aa13.73□□□□□ -0.21
RFX4-210ENST00000552773 AGLP35573 1532 aa13.73□□□□□ -0.21
RFX4-210ENST00000552773 ADGRB1O14514 1584 aa13.72□□□□□ -0.21
RFX4-210ENST00000552773 USP32Q8NFA0 1604 aa13.71□□□□□ -0.21
RFX4-210ENST00000552773 CGNL1Q0VF96 1302 aa13.71□□□□□ -0.21
RFX4-210ENST00000552773 POLR3AO14802 1390 aaPredicted RBP13.71□□□□□ -0.22
RFX4-210ENST00000552773 QRICH2Q9H0J4 1663 aa13.7□□□□□ -0.22
RFX4-210ENST00000552773 NEXMIFQ5QGS0 1516 aa13.7□□□□□ -0.22
RFX4-210ENST00000552773 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
RFX4-210ENST00000552773 B4GALNT3Q6L9W6 998 aa13.7□□□□□ -0.22
RFX4-210ENST00000552773 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
RFX4-210ENST00000552773 ADAMTS8Q9UP79 889 aa13.7□□□□□ -0.22
RFX4-210ENST00000552773 GOLGA2Q08379 1002 aa13.69□□□□□ -0.22
RFX4-210ENST00000552773 CYB5RLQ6IPT4 315 aa13.69□□□□□ -0.22
RFX4-210ENST00000552773 TRAK1Q9UPV9 953 aa13.69□□□□□ -0.22
RFX4-210ENST00000552773 DIP2BQ9P265 1576 aa13.68□□□□□ -0.22
RFX4-210ENST00000552773 FAM69CQ0P6D2 419 aa13.68□□□□□ -0.22
RFX4-210ENST00000552773 MORC1Q86VD1 984 aa13.67□□□□□ -0.22
RFX4-210ENST00000552773 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
RFX4-210ENST00000552773 ATAD2Q6PL18 1390 aa13.67□□□□□ -0.22
RFX4-210ENST00000552773 HDGFP51858 240 aaKnown RBP13.66□□□□□ -0.22
RFX4-210ENST00000552773 ANKRD36BQ8N2N9 1353 aa13.66□□□□□ -0.22
RFX4-210ENST00000552773 IDI1Q13907 227 aa13.66□□□□□ -0.22
RFX4-210ENST00000552773 RIMBP3CA6NJZ7 1639 aa13.65□□□□□ -0.22
RFX4-210ENST00000552773 RIMBP3BA6NNM3 1639 aa13.65□□□□□ -0.22
RFX4-210ENST00000552773 RIMBP3Q9UFD9 1639 aa13.65□□□□□ -0.22
RFX4-210ENST00000552773 YEATS2Q9ULM3 1422 aa13.65□□□□□ -0.22
RFX4-210ENST00000552773 E9PSI1 815 aa13.65□□□□□ -0.22
RFX4-210ENST00000552773 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
RFX4-210ENST00000552773 NSD3Q9BZ95 1437 aa13.64□□□□□ -0.23
RFX4-210ENST00000552773 SIGLEC1Q9BZZ2 1709 aa13.64□□□□□ -0.23
RFX4-210ENST00000552773 TMEM131LA2VDJ0 1609 aa13.64□□□□□ -0.23
RFX4-210ENST00000552773 TERF2IPQ9NYB0 399 aa13.63□□□□□ -0.23
RFX4-210ENST00000552773 SALL2Q9Y467 1007 aaPredicted RBP13.63□□□□□ -0.23
RFX4-210ENST00000552773 ARHGEF28Q8N1W1 1705 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms