RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 TNRQ92752 1358 aa15.43■□□□□ 0.06
LINC00661-206ENST00000552608 NEXMIFQ5QGS0 1516 aa15.42■□□□□ 0.06
LINC00661-206ENST00000552608 CARD11Q9BXL7 1154 aa15.41■□□□□ 0.06
LINC00661-206ENST00000552608 POLR1AO95602 1720 aaPredicted RBP15.4■□□□□ 0.06
LINC00661-206ENST00000552608 NLRP1Q9C000 1473 aa15.4■□□□□ 0.06
LINC00661-206ENST00000552608 NRXN1Q9ULB1 1477 aa15.4■□□□□ 0.06
LINC00661-206ENST00000552608 GPRASP1Q5JY77 1395 aa15.39■□□□□ 0.05
LINC00661-206ENST00000552608 VGFO15240 615 aaPredicted RBP15.39■□□□□ 0.05
LINC00661-206ENST00000552608 HSPA5P11021 654 aaKnown RBP15.39■□□□□ 0.05
LINC00661-206ENST00000552608 ZFYVE9O95405 1425 aa15.38■□□□□ 0.05
LINC00661-206ENST00000552608 USP47Q96K76 1375 aa15.37■□□□□ 0.05
LINC00661-206ENST00000552608 UBR1Q8IWV7 1749 aa15.37■□□□□ 0.05
LINC00661-206ENST00000552608 A2ML1A8K2U0 1454 aa15.36■□□□□ 0.05
LINC00661-206ENST00000552608 HDGFP51858 240 aaKnown RBP15.36■□□□□ 0.05
LINC00661-206ENST00000552608 SETBP1Q9Y6X0 1596 aa15.36■□□□□ 0.05
LINC00661-206ENST00000552608 IQGAP1P46940 1657 aa15.35■□□□□ 0.05
LINC00661-206ENST00000552608 DIEXFQ68CQ4 756 aaKnown RBP15.35■□□□□ 0.05
LINC00661-206ENST00000552608 MYO3AQ8NEV4 1616 aa15.35■□□□□ 0.05
LINC00661-206ENST00000552608 PIK3C2GO75747 1445 aa15.34■□□□□ 0.05
LINC00661-206ENST00000552608 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.34■□□□□ 0.05
LINC00661-206ENST00000552608 ADGRF5Q8IZF2 1346 aa15.34■□□□□ 0.05
LINC00661-206ENST00000552608 EIF3AQ14152 1382 aaKnown RBP15.33■□□□□ 0.04
LINC00661-206ENST00000552608 CEBPAP49715 358 aaPredicted RBP15.32■□□□□ 0.04
LINC00661-206ENST00000552608 HIRIP3Q9BW71 556 aaPredicted RBP15.32■□□□□ 0.04
LINC00661-206ENST00000552608 RIMS2Q9UQ26 1411 aa15.32■□□□□ 0.04
LINC00661-206ENST00000552608 SCAF11Q99590 1463 aaKnown RBP15.32■□□□□ 0.04
LINC00661-206ENST00000552608 SETD1BQ9UPS6 1966 aaKnown RBP15.31■□□□□ 0.04
LINC00661-206ENST00000552608 NBPF1Q3BBV0 1214 aa15.31■□□□□ 0.04
LINC00661-206ENST00000552608 PLPPR3Q6T4P5 718 aa15.3■□□□□ 0.04
LINC00661-206ENST00000552608 C14orf93Q9H972 538 aaKnown RBP15.3■□□□□ 0.04
LINC00661-206ENST00000552608 ZNF142P52746 1687 aaPredicted RBP15.29■□□□□ 0.04
LINC00661-206ENST00000552608 CFAP70Q5T0N1 1121 aa15.29■□□□□ 0.04
LINC00661-206ENST00000552608 CEP170BQ9Y4F5 1589 aaPredicted RBP15.28■□□□□ 0.04
LINC00661-206ENST00000552608 SLC24A1O60721 1099 aa15.27■□□□□ 0.04
LINC00661-206ENST00000552608 TMEM2Q9UHN6 1383 aa15.26■□□□□ 0.03
LINC00661-206ENST00000552608 NUTM2DQ5VT03 806 aaPredicted RBP15.26■□□□□ 0.03
LINC00661-206ENST00000552608 THEMISQ8N1K5 641 aaPredicted RBP15.26■□□□□ 0.03
LINC00661-206ENST00000552608 ST20-MTHFSA0A0A6YYL1 179 aa15.25■□□□□ 0.03
LINC00661-206ENST00000552608 SLIT1O75093 1534 aa15.25■□□□□ 0.03
LINC00661-206ENST00000552608 PTPRMP28827 1452 aa15.25■□□□□ 0.03
LINC00661-206ENST00000552608 ALKQ9UM73 1620 aa15.25■□□□□ 0.03
LINC00661-206ENST00000552608 ADGRB1O14514 1584 aa15.24■□□□□ 0.03
LINC00661-206ENST00000552608 EID1Q9Y6B2 187 aa15.24■□□□□ 0.03
LINC00661-206ENST00000552608 CCDC7Q96M83 1385 aa15.24■□□□□ 0.03
LINC00661-206ENST00000552608 ARHGAP23Q9P227 1491 aa15.23■□□□□ 0.03
LINC00661-206ENST00000552608 SETD1AO15047 1707 aaKnown RBP15.22■□□□□ 0.03
LINC00661-206ENST00000552608 ARHGEF28Q8N1W1 1705 aaKnown RBP15.22■□□□□ 0.03
LINC00661-206ENST00000552608 WASHC2AQ641Q2 1341 aa15.21■□□□□ 0.03
LINC00661-206ENST00000552608 TMF1P82094 1093 aa15.21■□□□□ 0.03
LINC00661-206ENST00000552608 DDX10Q13206 875 aaKnown RBP15.21■□□□□ 0.03
LINC00661-206ENST00000552608 NRXN3Q9Y4C0 1643 aa15.21■□□□□ 0.02
LINC00661-206ENST00000552608 QRICH2Q9H0J4 1663 aa15.2■□□□□ 0.02
LINC00661-206ENST00000552608 PLEKHG1Q9ULL1 1385 aa15.2■□□□□ 0.02
LINC00661-206ENST00000552608 KIF7Q2M1P5 1343 aa15.19■□□□□ 0.02
LINC00661-206ENST00000552608 CDCA8Q53HL2 280 aa15.19■□□□□ 0.02
LINC00661-206ENST00000552608 BCANQ96GW7 911 aa15.19■□□□□ 0.02
LINC00661-206ENST00000552608 ASXL1Q8IXJ9 1541 aa15.18■□□□□ 0.02
LINC00661-206ENST00000552608 TXNDC2Q86VQ3 553 aa15.18■□□□□ 0.02
LINC00661-206ENST00000552608 DIP2AQ14689 1571 aa15.18■□□□□ 0.02
LINC00661-206ENST00000552608 CENPJQ9HC77 1338 aaPredicted RBP15.17■□□□□ 0.02
LINC00661-206ENST00000552608 KNDC1Q76NI1 1749 aa15.17■□□□□ 0.02
LINC00661-206ENST00000552608 TMEM132EQ6IEE7 984 aa15.17■□□□□ 0.02
LINC00661-206ENST00000552608 YTHDC2Q9H6S0 1430 aaKnown RBP15.17■□□□□ 0.02
LINC00661-206ENST00000552608 SBNO2Q9Y2G9 1366 aa15.16■□□□□ 0.02
LINC00661-206ENST00000552608 POLR3GLQ9BT43 218 aa15.16■□□□□ 0.02
LINC00661-206ENST00000552608 TRAK1Q9UPV9 953 aa15.16■□□□□ 0.02
LINC00661-206ENST00000552608 DLC1Q96QB1 1528 aa15.16■□□□□ 0.02
LINC00661-206ENST00000552608 C11orf95C9JLR9 678 aaPredicted RBP15.15■□□□□ 0.02
LINC00661-206ENST00000552608 TESK2Q96S53 571 aa15.15■□□□□ 0.02
LINC00661-206ENST00000552608 LRPPRCP42704 1394 aaKnown RBP15.13■□□□□ 0.01
LINC00661-206ENST00000552608 ANKLE2Q86XL3 938 aa15.13■□□□□ 0.01
LINC00661-206ENST00000552608 LTKP29376 864 aa15.12■□□□□ 0.01
LINC00661-206ENST00000552608 DISP3Q9P2K9 1392 aa15.11■□□□□ 0.01
LINC00661-206ENST00000552608 ADAMTS13Q76LX8 1427 aa15.11■□□□□ 0.01
LINC00661-206ENST00000552608 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
LINC00661-206ENST00000552608 STK26Q9P289 416 aa15.11■□□□□ 0.01
LINC00661-206ENST00000552608 ABCC11Q96J66 1382 aa15.11■□□□□ 0.01
LINC00661-206ENST00000552608 ANP32CO43423 234 aa15.1■□□□□ 0.01
LINC00661-206ENST00000552608 POGKQ9P215 609 aa15.1■□□□□ 0.01
LINC00661-206ENST00000552608 CPS1P31327 1500 aa15.1■□□□□ 0.01
LINC00661-206ENST00000552608 MED14O60244 1454 aa15.09■□□□□ 0.01
LINC00661-206ENST00000552608 TBX22Q9Y458 520 aa15.09■□□□□ 0.01
LINC00661-206ENST00000552608 SIRT1Q96EB6 747 aa15.08■□□□□ 0
LINC00661-206ENST00000552608 TECPR2O15040 1411 aa15.08■□□□□ 0
LINC00661-206ENST00000552608 EVC2Q86UK5 1308 aa15.07■□□□□ 0
LINC00661-206ENST00000552608 METP08581 1390 aa15.07■□□□□ 0
LINC00661-206ENST00000552608 PIK3R4Q99570 1358 aa15.07■□□□□ 0
LINC00661-206ENST00000552608 FAM135BQ49AJ0 1406 aa15.07■□□□□ 0
LINC00661-206ENST00000552608 MIER1Q8N108 512 aa15.06■□□□□ 0
LINC00661-206ENST00000552608 PUS7Q96PZ0 661 aaKnown RBP15.06■□□□□ 0
LINC00661-206ENST00000552608 MYOM1P52179 1685 aa15.06■□□□□ 0
LINC00661-206ENST00000552608 KDM4FA0A1W2PPD8 638 aa15.05■□□□□ -0
LINC00661-206ENST00000552608 PRAM1Q96QH2 718 aa15.05■□□□□ -0
LINC00661-206ENST00000552608 NPHP4O75161 1426 aaPredicted RBP15.04■□□□□ -0
LINC00661-206ENST00000552608 CHD2O14647 1828 aaKnown RBP15.03■□□□□ -0
LINC00661-206ENST00000552608 SLC26A8Q96RN1 970 aa15.03■□□□□ -0
LINC00661-206ENST00000552608 XRN1Q8IZH2 1706 aaKnown RBP15.03■□□□□ -0
LINC00661-206ENST00000552608 TULP4Q9NRJ4 1543 aa15.02■□□□□ -0
LINC00661-206ENST00000552608 PTCH1Q13635 1447 aa15.01□□□□□ -0.01
LINC00661-206ENST00000552608 SAFB2Q14151 953 aaKnown RBP eCLIP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms