RNA–Protein interactions for RNA: ENST00000552578.1

C12orf42-215, Transcript of chromosome 12 open reading frame 42, humanhuman

APPRIS ALT2 TSL 3

Gene C12orf42, Length 831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf42-215ENST00000552578 VPS8Q8N3P4 1428 aa28.26■■■□□ 2.11
C12orf42-215ENST00000552578 COL16A1Q07092 1604 aaPredicted RBP28.25■■■□□ 2.11
C12orf42-215ENST00000552578 CROCC2H7BZ55 1655 aa28.25■■■□□ 2.11
C12orf42-215ENST00000552578 NCOA3Q9Y6Q9 1424 aa28.25■■■□□ 2.11
C12orf42-215ENST00000552578 LRP6O75581 1613 aa28.24■■■□□ 2.11
C12orf42-215ENST00000552578 ADGRB3O60242 1522 aa28.22■■■□□ 2.11
C12orf42-215ENST00000552578 HDGFP51858 240 aaKnown RBP28.21■■■□□ 2.11
C12orf42-215ENST00000552578 MEX3CQ5U5Q3 659 aaKnown RBP28.2■■■□□ 2.1
C12orf42-215ENST00000552578 PLEKHG1Q9ULL1 1385 aa28.2■■■□□ 2.1
C12orf42-215ENST00000552578 TRIM52Q96A61 297 aa28.19■■■□□ 2.1
C12orf42-215ENST00000552578 TBX22Q9Y458 520 aa28.19■■■□□ 2.1
C12orf42-215ENST00000552578 CHD2O14647 1828 aaKnown RBP28.18■■■□□ 2.1
C12orf42-215ENST00000552578 DAPK1P53355 1430 aa28.18■■■□□ 2.1
C12orf42-215ENST00000552578 ZFYVE9O95405 1425 aa28.17■■■□□ 2.1
C12orf42-215ENST00000552578 RXRBP28702 533 aa28.16■■■□□ 2.1
C12orf42-215ENST00000552578 ANKRD30AQ9BXX3 1397 aa28.15■■■□□ 2.1
C12orf42-215ENST00000552578 CADPS2Q86UW7 1296 aa28.15■■■□□ 2.1
C12orf42-215ENST00000552578 C19orf44Q9H6X5 657 aa28.14■■■□□ 2.1
C12orf42-215ENST00000552578 MYO5BQ9ULV0 1848 aa28.12■■■□□ 2.09
C12orf42-215ENST00000552578 PPP1R15AO75807 674 aaPredicted RBP28.11■■■□□ 2.09
C12orf42-215ENST00000552578 CHIC2Q9UKJ5 165 aa28.11■■■□□ 2.09
C12orf42-215ENST00000552578 RIMS2Q9UQ26 1411 aa28.1■■■□□ 2.09
C12orf42-215ENST00000552578 C14orf37Q86TY3 774 aa28.1■■■□□ 2.09
C12orf42-215ENST00000552578 AHDC1Q5TGY3 1603 aaPredicted RBP28.1■■■□□ 2.09
C12orf42-215ENST00000552578 PTPN23Q9H3S7 1636 aa28.1■■■□□ 2.09
C12orf42-215ENST00000552578 RPRD2Q5VT52 1461 aaKnown RBP28.09■■■□□ 2.09
C12orf42-215ENST00000552578 CDK12Q9NYV4 1490 aaPredicted RBP28.09■■■□□ 2.09
C12orf42-215ENST00000552578 ATF3P18847 181 aa28.09■■■□□ 2.09
C12orf42-215ENST00000552578 SHPRHQ149N8 1683 aa28.08■■■□□ 2.09
C12orf42-215ENST00000552578 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.08■■■□□ 2.09
C12orf42-215ENST00000552578 PIK3R4Q99570 1358 aa28.05■■■□□ 2.08
C12orf42-215ENST00000552578 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.04■■■□□ 2.08
C12orf42-215ENST00000552578 BRINP3Q76B58 766 aa28.02■■■□□ 2.08
C12orf42-215ENST00000552578 GCC2Q8IWJ2 1684 aa28.02■■■□□ 2.08
C12orf42-215ENST00000552578 ADAMTS13Q76LX8 1427 aa28.01■■■□□ 2.08
C12orf42-215ENST00000552578 DIP2AQ14689 1571 aa28■■■□□ 2.07
C12orf42-215ENST00000552578 NUTM2BA6NNL0 878 aaPredicted RBP28■■■□□ 2.07
C12orf42-215ENST00000552578 NUTM2EB1AL46 878 aaPredicted RBP28■■■□□ 2.07
C12orf42-215ENST00000552578 NUTM2AQ8IVF1 878 aaPredicted RBP28■■■□□ 2.07
C12orf42-215ENST00000552578 TMEM131LA2VDJ0 1609 aa28■■■□□ 2.07
C12orf42-215ENST00000552578 AFF2P51816 1311 aa27.98■■■□□ 2.07
C12orf42-215ENST00000552578 AMOTL2Q9Y2J4 779 aa27.96■■■□□ 2.07
C12orf42-215ENST00000552578 ADGRL2O95490 1459 aa27.95■■■□□ 2.07
C12orf42-215ENST00000552578 SETD5Q9C0A6 1442 aa27.95■■■□□ 2.07
C12orf42-215ENST00000552578 SRCAPQ6ZRS2 3230 aa27.94■■■□□ 2.06
C12orf42-215ENST00000552578 LOC105371045A0A1W2PR82 267 aa27.94■■■□□ 2.06
C12orf42-215ENST00000552578 CHGAP10645 457 aaKnown RBP27.94■■■□□ 2.06
C12orf42-215ENST00000552578 APLP2Q06481 763 aa27.93■■■□□ 2.06
C12orf42-215ENST00000552578 LRRC59Q96AG4 307 aaKnown RBP27.93■■■□□ 2.06
C12orf42-215ENST00000552578 RBM6P78332 1123 aaKnown RBP27.92■■■□□ 2.06
C12orf42-215ENST00000552578 NUTM2DQ5VT03 806 aaPredicted RBP27.92■■■□□ 2.06
C12orf42-215ENST00000552578 QTRT2Q9H974 415 aaKnown RBP27.92■■■□□ 2.06
C12orf42-215ENST00000552578 DCCP43146 1447 aa27.92■■■□□ 2.06
C12orf42-215ENST00000552578 ANKRD50Q9ULJ7 1429 aa27.92■■■□□ 2.06
C12orf42-215ENST00000552578 PTPRUQ92729 1446 aa27.89■■■□□ 2.06
C12orf42-215ENST00000552578 RGS12O14924 1447 aa27.86■■■□□ 2.05
C12orf42-215ENST00000552578 TRPM2O94759 1503 aa27.86■■■□□ 2.05
C12orf42-215ENST00000552578 ASXL1Q8IXJ9 1541 aa27.86■■■□□ 2.05
C12orf42-215ENST00000552578 C8orf37Q96NL8 207 aa27.85■■■□□ 2.05
C12orf42-215ENST00000552578 MST1RQ04912 1400 aa27.83■■■□□ 2.05
C12orf42-215ENST00000552578 NHSL1Q5SYE7 1610 aa27.82■■■□□ 2.04
C12orf42-215ENST00000552578 NGLY1Q96IV0 654 aa27.8■■■□□ 2.04
C12orf42-215ENST00000552578 PNPLA6Q8IY17 1366 aa27.8■■■□□ 2.04
C12orf42-215ENST00000552578 E9PCH4 1651 aa27.77■■■□□ 2.04
C12orf42-215ENST00000552578 UNC13BO14795 1591 aa27.77■■■□□ 2.04
C12orf42-215ENST00000552578 FAM50AQ14320 339 aaKnown RBP27.76■■■□□ 2.03
C12orf42-215ENST00000552578 XRN1Q8IZH2 1706 aaKnown RBP27.75■■■□□ 2.03
C12orf42-215ENST00000552578 FOXD1Q16676 465 aa27.75■■■□□ 2.03
C12orf42-215ENST00000552578 DDX17Q92841 729 aaKnown RBP27.75■■■□□ 2.03
C12orf42-215ENST00000552578 ATAD2Q6PL18 1390 aa27.73■■■□□ 2.03
C12orf42-215ENST00000552578 NRXN3Q9Y4C0 1643 aa27.73■■■□□ 2.03
C12orf42-215ENST00000552578 ADAMTS2O95450 1211 aa27.7■■■□□ 2.02
C12orf42-215ENST00000552578 ZRANB1Q9UGI0 708 aa27.7■■■□□ 2.02
C12orf42-215ENST00000552578 METP08581 1390 aa27.69■■■□□ 2.02
C12orf42-215ENST00000552578 SETBP1Q9Y6X0 1596 aa27.69■■■□□ 2.02
C12orf42-215ENST00000552578 ADGRL3Q9HAR2 1447 aa27.68■■■□□ 2.02
C12orf42-215ENST00000552578 TRPC5Q9UL62 973 aaPredicted RBP27.68■■■□□ 2.02
C12orf42-215ENST00000552578 USP21Q9UK80 565 aa27.67■■■□□ 2.02
C12orf42-215ENST00000552578 FNBP4Q8N3X1 1017 aaPredicted RBP27.66■■■□□ 2.02
C12orf42-215ENST00000552578 CCDC125Q86Z20 511 aa27.64■■■□□ 2.02
C12orf42-215ENST00000552578 SOS2Q07890 1332 aaPredicted RBP27.64■■■□□ 2.01
C12orf42-215ENST00000552578 IQGAP3Q86VI3 1631 aa27.63■■■□□ 2.01
C12orf42-215ENST00000552578 NALCNQ8IZF0 1738 aa27.62■■■□□ 2.01
C12orf42-215ENST00000552578 C1orf167Q5SNV9 1468 aa27.62■■■□□ 2.01
C12orf42-215ENST00000552578 NUP155O75694 1391 aa27.61■■■□□ 2.01
C12orf42-215ENST00000552578 ROCK1Q13464 1354 aa27.6■■■□□ 2.01
C12orf42-215ENST00000552578 PTCH1Q13635 1447 aa27.6■■■□□ 2.01
C12orf42-215ENST00000552578 ZNF326Q5BKZ1 582 aaKnown RBP27.59■■■□□ 2.01
C12orf42-215ENST00000552578 LAMC1P11047 1609 aa27.58■■■□□ 2.01
C12orf42-215ENST00000552578 ATRNO75882 1429 aa27.58■■■□□ 2
C12orf42-215ENST00000552578 EP400Q96L91 3159 aa27.57■■■□□ 2
C12orf42-215ENST00000552578 ORAI2Q96SN7 254 aa27.56■■■□□ 2
C12orf42-215ENST00000552578 BCL9LQ86UU0 1499 aa27.47■■□□□ 1.99
C12orf42-215ENST00000552578 SPHKAPQ2M3C7 1700 aa27.47■■□□□ 1.99
C12orf42-215ENST00000552578 GJD4Q96KN9 370 aaPredicted RBP27.46■■□□□ 1.99
C12orf42-215ENST00000552578 COL22A1Q8NFW1 1626 aaPredicted RBP27.45■■□□□ 1.98
C12orf42-215ENST00000552578 NEXMIFQ5QGS0 1516 aa27.44■■□□□ 1.98
C12orf42-215ENST00000552578 ROBO2Q9HCK4 1378 aa27.44■■□□□ 1.98
C12orf42-215ENST00000552578 MYOM2P54296 1465 aa27.44■■□□□ 1.98
C12orf42-215ENST00000552578 VGFO15240 615 aaPredicted RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms