RNA–Protein interactions for RNA: ENST00000552564.5

ITGA5-211, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 4,996 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-211ENST00000552564 MAP7D2Q96T17 732 aa17.21■□□□□ 0.35
ITGA5-211ENST00000552564 MIA2Q96PC5 1412 aa17.21■□□□□ 0.35
ITGA5-211ENST00000552564 CPLX2Q6PUV4 134 aaKnown RBP17.21■□□□□ 0.35
ITGA5-211ENST00000552564 CLSTN1O94985 981 aa17.2■□□□□ 0.34
ITGA5-211ENST00000552564 A0A0U1RQG5 324 aaPredicted RBP17.2■□□□□ 0.34
ITGA5-211ENST00000552564 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
ITGA5-211ENST00000552564 ISY1Q9ULR0 285 aaKnown RBP17.2■□□□□ 0.34
ITGA5-211ENST00000552564 RASSF8Q8NHQ8 419 aa17.2■□□□□ 0.34
ITGA5-211ENST00000552564 CSB-PGBD3P0DP91 1061 aa17.19■□□□□ 0.34
ITGA5-211ENST00000552564 ZKSCAN1P17029 563 aaPredicted RBP17.19■□□□□ 0.34
ITGA5-211ENST00000552564 CNTLNQ9NXG0 1405 aa17.19■□□□□ 0.34
ITGA5-211ENST00000552564 DZIP1LQ8IYY4 767 aaKnown RBP17.18■□□□□ 0.34
ITGA5-211ENST00000552564 ARID3AQ99856 593 aa17.18■□□□□ 0.34
ITGA5-211ENST00000552564 VGFO15240 615 aaPredicted RBP17.18■□□□□ 0.34
ITGA5-211ENST00000552564 AMPHP49418 695 aa17.18■□□□□ 0.34
ITGA5-211ENST00000552564 PAK3O75914 559 aaPredicted RBP17.17■□□□□ 0.34
ITGA5-211ENST00000552564 TPM2P07951 284 aa17.17■□□□□ 0.34
ITGA5-211ENST00000552564 CCDC7Q96M83 1385 aa17.17■□□□□ 0.34
ITGA5-211ENST00000552564 CEP89Q96ST8 783 aa17.17■□□□□ 0.34
ITGA5-211ENST00000552564 MRE11P49959 708 aa17.17■□□□□ 0.34
ITGA5-211ENST00000552564 COG6Q9Y2V7 657 aa17.17■□□□□ 0.34
ITGA5-211ENST00000552564 TEX35Q5T0J7 233 aa17.16■□□□□ 0.34
ITGA5-211ENST00000552564 EID1Q9Y6B2 187 aa17.16■□□□□ 0.34
ITGA5-211ENST00000552564 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
ITGA5-211ENST00000552564 DIAPH3Q9NSV4 1193 aa17.16■□□□□ 0.34
ITGA5-211ENST00000552564 BRD4O60885 1362 aaPredicted RBP17.16■□□□□ 0.34
ITGA5-211ENST00000552564 MLECQ14165 292 aa17.16■□□□□ 0.34
ITGA5-211ENST00000552564 NOL8Q76FK4 1167 aaKnown RBP17.16■□□□□ 0.34
ITGA5-211ENST00000552564 FAM43AQ8N2R8 423 aa17.15■□□□□ 0.34
ITGA5-211ENST00000552564 CHMP3Q9Y3E7 222 aa17.15■□□□□ 0.34
ITGA5-211ENST00000552564 HECW1Q76N89 1606 aa17.15■□□□□ 0.34
ITGA5-211ENST00000552564 WASHC2CQ9Y4E1 1318 aa17.15■□□□□ 0.34
ITGA5-211ENST00000552564 RNF20Q5VTR2 975 aa17.15■□□□□ 0.34
ITGA5-211ENST00000552564 INTS3Q68E01 1043 aaKnown RBP17.15■□□□□ 0.34
ITGA5-211ENST00000552564 TPD52L1Q16890 204 aaPredicted RBP17.14■□□□□ 0.33
ITGA5-211ENST00000552564 RILPL2Q969X0 211 aa17.14■□□□□ 0.33
ITGA5-211ENST00000552564 HOOK1Q9UJC3 728 aaKnown RBP17.14■□□□□ 0.33
ITGA5-211ENST00000552564 NGDNQ8NEJ9 315 aaKnown RBP17.14■□□□□ 0.33
ITGA5-211ENST00000552564 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
ITGA5-211ENST00000552564 TMX4Q9H1E5 349 aaPredicted RBP17.13■□□□□ 0.33
ITGA5-211ENST00000552564 LAMC3Q9Y6N6 1575 aa17.13■□□□□ 0.33
ITGA5-211ENST00000552564 APAF1O14727 1248 aa17.13■□□□□ 0.33
ITGA5-211ENST00000552564 HSP90AB4PQ58FF6 505 aa17.13■□□□□ 0.33
ITGA5-211ENST00000552564 RUNDC1Q96C34 613 aa17.13■□□□□ 0.33
ITGA5-211ENST00000552564 COG3Q96JB2 828 aa17.13■□□□□ 0.33
ITGA5-211ENST00000552564 PLIN1O60240 522 aa17.13■□□□□ 0.33
ITGA5-211ENST00000552564 ANKRD20A12PQ8NF67 263 aa17.12■□□□□ 0.33
ITGA5-211ENST00000552564 UNC13AQ9UPW8 1703 aa17.12■□□□□ 0.33
ITGA5-211ENST00000552564 IPO7O95373 1038 aaKnown RBP17.12■□□□□ 0.33
ITGA5-211ENST00000552564 CUL7Q14999 1698 aa17.12■□□□□ 0.33
ITGA5-211ENST00000552564 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
ITGA5-211ENST00000552564 SYNE3Q6ZMZ3 975 aa17.11■□□□□ 0.33
ITGA5-211ENST00000552564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.11■□□□□ 0.33
ITGA5-211ENST00000552564 AKAP17AQ02040 695 aaKnown RBP17.11■□□□□ 0.33
ITGA5-211ENST00000552564 ANKRD50Q9ULJ7 1429 aa17.11■□□□□ 0.33
ITGA5-211ENST00000552564 SLC4A3P48751 1232 aa17.11■□□□□ 0.33
ITGA5-211ENST00000552564 TRAK1Q9UPV9 953 aa17.11■□□□□ 0.33
ITGA5-211ENST00000552564 WASHC2AQ641Q2 1341 aa17.1■□□□□ 0.33
ITGA5-211ENST00000552564 RRP7AQ9Y3A4 280 aaKnown RBP17.1■□□□□ 0.33
ITGA5-211ENST00000552564 CCDC47Q96A33 483 aaKnown RBP17.1■□□□□ 0.33
ITGA5-211ENST00000552564 SYNJ2O15056 1496 aa17.1■□□□□ 0.33
ITGA5-211ENST00000552564 ARGLU1Q9NWB6 273 aaPredicted RBP17.1■□□□□ 0.33
ITGA5-211ENST00000552564 BIVM-ERCC5R4GMW8 1640 aa17.09■□□□□ 0.33
ITGA5-211ENST00000552564 C22orf23Q9BZE7 217 aa17.09■□□□□ 0.33
ITGA5-211ENST00000552564 DIAPH1O60610 1272 aaKnown RBP17.09■□□□□ 0.33
ITGA5-211ENST00000552564 NEXNQ0ZGT2 675 aa17.09■□□□□ 0.33
ITGA5-211ENST00000552564 ACBD3Q9H3P7 528 aa17.09■□□□□ 0.33
ITGA5-211ENST00000552564 CCDC39Q9UFE4 941 aa17.09■□□□□ 0.33
ITGA5-211ENST00000552564 ZNF644Q9H582 1327 aaPredicted RBP17.09■□□□□ 0.33
ITGA5-211ENST00000552564 NFKBIBQ15653 356 aa17.08■□□□□ 0.33
ITGA5-211ENST00000552564 ZNF771Q7L3S4 317 aaPredicted RBP17.08■□□□□ 0.33
ITGA5-211ENST00000552564 LETM1O95202 739 aaPredicted RBP17.08■□□□□ 0.32
ITGA5-211ENST00000552564 GNAI1P63096 354 aa17.08■□□□□ 0.32
ITGA5-211ENST00000552564 TRIM29Q14134 588 aa17.08■□□□□ 0.32
ITGA5-211ENST00000552564 HFM1A2PYH4 1435 aa17.07■□□□□ 0.32
ITGA5-211ENST00000552564 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
ITGA5-211ENST00000552564 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
ITGA5-211ENST00000552564 SUPT6HQ7KZ85 1726 aaKnown RBP17.07■□□□□ 0.32
ITGA5-211ENST00000552564 MBD3O95983 291 aa17.07■□□□□ 0.32
ITGA5-211ENST00000552564 BCL2L13Q9BXK5 485 aa17.06■□□□□ 0.32
ITGA5-211ENST00000552564 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
ITGA5-211ENST00000552564 TOMM22Q9NS69 142 aa17.06■□□□□ 0.32
ITGA5-211ENST00000552564 KIF7Q2M1P5 1343 aa17.06■□□□□ 0.32
ITGA5-211ENST00000552564 ZNF330Q9Y3S2 320 aaPredicted RBP17.06■□□□□ 0.32
ITGA5-211ENST00000552564 NINLQ9Y2I6 1382 aa17.06■□□□□ 0.32
ITGA5-211ENST00000552564 MCM2P49736 904 aa17.06■□□□□ 0.32
ITGA5-211ENST00000552564 CDC45O75419 566 aa17.05■□□□□ 0.32
ITGA5-211ENST00000552564 SMC3Q9UQE7 1217 aa17.05■□□□□ 0.32
ITGA5-211ENST00000552564 SASS6Q6UVJ0 657 aa17.05■□□□□ 0.32
ITGA5-211ENST00000552564 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.05■□□□□ 0.32
ITGA5-211ENST00000552564 ERC2O15083 957 aa17.05■□□□□ 0.32
ITGA5-211ENST00000552564 MARCH6O60337 910 aa17.05■□□□□ 0.32
ITGA5-211ENST00000552564 DHX8Q14562 1220 aaKnown RBP17.04■□□□□ 0.32
ITGA5-211ENST00000552564 DDX58O95786 925 aaKnown RBP17.04■□□□□ 0.32
ITGA5-211ENST00000552564 C1orf141Q5JVX7 400 aa17.04■□□□□ 0.32
ITGA5-211ENST00000552564 TEFQ10587 303 aa17.04■□□□□ 0.32
ITGA5-211ENST00000552564 BICD2Q8TD16 824 aa17.04■□□□□ 0.32
ITGA5-211ENST00000552564 TROQ12816 1431 aaPredicted RBP17.03■□□□□ 0.32
ITGA5-211ENST00000552564 IFIT2P09913 472 aaKnown RBP17.03■□□□□ 0.32
ITGA5-211ENST00000552564 SNAPC4Q5SXM2 1469 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms