RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 CCDC125Q86Z20 511 aa18.58■□□□□ 0.57
RBFOX1-214ENST00000552089 CEP152O94986 1710 aa18.58■□□□□ 0.57
RBFOX1-214ENST00000552089 EFCAB6Q5THR3 1501 aa18.58■□□□□ 0.57
RBFOX1-214ENST00000552089 MAST1Q9Y2H9 1570 aa18.58■□□□□ 0.56
RBFOX1-214ENST00000552089 MROH1Q8NDA8 1641 aa18.57■□□□□ 0.56
RBFOX1-214ENST00000552089 CEP162Q5TB80 1403 aa18.56■□□□□ 0.56
RBFOX1-214ENST00000552089 CFAP65Q6ZU64 1925 aaKnown RBP18.56■□□□□ 0.56
RBFOX1-214ENST00000552089 MTUS2Q5JR59 1369 aa18.56■□□□□ 0.56
RBFOX1-214ENST00000552089 CADPS2Q86UW7 1296 aa18.56■□□□□ 0.56
RBFOX1-214ENST00000552089 BCANQ96GW7 911 aa18.56■□□□□ 0.56
RBFOX1-214ENST00000552089 BRINP3Q76B58 766 aa18.55■□□□□ 0.56
RBFOX1-214ENST00000552089 SETD5Q9C0A6 1442 aa18.54■□□□□ 0.56
RBFOX1-214ENST00000552089 NCOA3Q9Y6Q9 1424 aa18.54■□□□□ 0.56
RBFOX1-214ENST00000552089 ATF3P18847 181 aa18.54■□□□□ 0.56
RBFOX1-214ENST00000552089 ARHGAP31Q2M1Z3 1444 aa18.52■□□□□ 0.55
RBFOX1-214ENST00000552089 EIF2AK4Q9P2K8 1649 aaKnown RBP18.51■□□□□ 0.55
RBFOX1-214ENST00000552089 IFFO2Q5TF58 517 aa18.51■□□□□ 0.55
RBFOX1-214ENST00000552089 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.51■□□□□ 0.55
RBFOX1-214ENST00000552089 ADAMTS2O95450 1211 aa18.49■□□□□ 0.55
RBFOX1-214ENST00000552089 TRIM26Q12899 539 aaPredicted RBP18.49■□□□□ 0.55
RBFOX1-214ENST00000552089 RSPH4AQ5TD94 716 aa18.49■□□□□ 0.55
RBFOX1-214ENST00000552089 PNPLA6Q8IY17 1366 aa18.49■□□□□ 0.55
RBFOX1-214ENST00000552089 ASXL1Q8IXJ9 1541 aa18.49■□□□□ 0.55
RBFOX1-214ENST00000552089 C19orf44Q9H6X5 657 aa18.49■□□□□ 0.55
RBFOX1-214ENST00000552089 TRPC5Q9UL62 973 aaPredicted RBP18.49■□□□□ 0.55
RBFOX1-214ENST00000552089 NHSL1Q5SYE7 1610 aa18.48■□□□□ 0.55
RBFOX1-214ENST00000552089 YY1P25490 414 aa18.48■□□□□ 0.55
RBFOX1-214ENST00000552089 USP21Q9UK80 565 aa18.48■□□□□ 0.55
RBFOX1-214ENST00000552089 CHD2O14647 1828 aaKnown RBP18.47■□□□□ 0.55
RBFOX1-214ENST00000552089 TSPY4P0CV99 314 aa18.47■□□□□ 0.55
RBFOX1-214ENST00000552089 TSPY10P0CW01 314 aa18.47■□□□□ 0.55
RBFOX1-214ENST00000552089 LRRC59Q96AG4 307 aaKnown RBP18.47■□□□□ 0.55
RBFOX1-214ENST00000552089 BLMP54132 1417 aaPredicted RBP18.45■□□□□ 0.54
RBFOX1-214ENST00000552089 ARHGEF5Q12774 1597 aa18.45■□□□□ 0.54
RBFOX1-214ENST00000552089 ATRNO75882 1429 aa18.44■□□□□ 0.54
RBFOX1-214ENST00000552089 IDI1Q13907 227 aa18.44■□□□□ 0.54
RBFOX1-214ENST00000552089 DEFB132Q7Z7B7 95 aa18.44■□□□□ 0.54
RBFOX1-214ENST00000552089 ADGRB3O60242 1522 aa18.44■□□□□ 0.54
RBFOX1-214ENST00000552089 EHBP1L1Q8N3D4 1523 aa18.43■□□□□ 0.54
RBFOX1-214ENST00000552089 PLEKHG1Q9ULL1 1385 aa18.42■□□□□ 0.54
RBFOX1-214ENST00000552089 PSDA5PKW4 1024 aaPredicted RBP18.41■□□□□ 0.54
RBFOX1-214ENST00000552089 HRCP23327 699 aa18.4■□□□□ 0.54
RBFOX1-214ENST00000552089 DDX17Q92841 729 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-214ENST00000552089 DCCP43146 1447 aa18.37■□□□□ 0.53
RBFOX1-214ENST00000552089 PPP1R15AO75807 674 aaPredicted RBP18.37■□□□□ 0.53
RBFOX1-214ENST00000552089 FNBP4Q8N3X1 1017 aaPredicted RBP18.37■□□□□ 0.53
RBFOX1-214ENST00000552089 BCL9LQ86UU0 1499 aa18.37■□□□□ 0.53
RBFOX1-214ENST00000552089 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
RBFOX1-214ENST00000552089 ZFYVE9O95405 1425 aa18.36■□□□□ 0.53
RBFOX1-214ENST00000552089 MST1RQ04912 1400 aa18.36■□□□□ 0.53
RBFOX1-214ENST00000552089 TBX22Q9Y458 520 aa18.35■□□□□ 0.53
RBFOX1-214ENST00000552089 DUOX2Q9NRD8 1548 aa18.33■□□□□ 0.53
RBFOX1-214ENST00000552089 PTCH1Q13635 1447 aa18.33■□□□□ 0.53
RBFOX1-214ENST00000552089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.52
RBFOX1-214ENST00000552089 RIMS2Q9UQ26 1411 aa18.32■□□□□ 0.52
RBFOX1-214ENST00000552089 PCGF6Q9BYE7 350 aa18.32■□□□□ 0.52
RBFOX1-214ENST00000552089 VPS8Q8N3P4 1428 aa18.31■□□□□ 0.52
RBFOX1-214ENST00000552089 UNC13BO14795 1591 aa18.3■□□□□ 0.52
RBFOX1-214ENST00000552089 NOS1P29475 1434 aa18.29■□□□□ 0.52
RBFOX1-214ENST00000552089 ADAMTS13Q76LX8 1427 aa18.29■□□□□ 0.52
RBFOX1-214ENST00000552089 PIK3R4Q99570 1358 aa18.29■□□□□ 0.52
RBFOX1-214ENST00000552089 GJD4Q96KN9 370 aaPredicted RBP18.28■□□□□ 0.52
RBFOX1-214ENST00000552089 KANK1Q14678 1352 aa18.28■□□□□ 0.52
RBFOX1-214ENST00000552089 SENP3-EIF4A1A0A087X0R7 540 aa18.26■□□□□ 0.51
RBFOX1-214ENST00000552089 SLC52A1Q9NWF4 448 aa18.26■□□□□ 0.51
RBFOX1-214ENST00000552089 HDGFP51858 240 aaKnown RBP18.25■□□□□ 0.51
RBFOX1-214ENST00000552089 ERBINQ96RT1 1412 aa18.25■□□□□ 0.51
RBFOX1-214ENST00000552089 TRPM2O94759 1503 aa18.25■□□□□ 0.51
RBFOX1-214ENST00000552089 LMTK2Q8IWU2 1503 aa18.25■□□□□ 0.51
RBFOX1-214ENST00000552089 AMOTL2Q9Y2J4 779 aa18.24■□□□□ 0.51
RBFOX1-214ENST00000552089 PTPRUQ92729 1446 aa18.24■□□□□ 0.51
RBFOX1-214ENST00000552089 KIF15Q9NS87 1388 aa18.24■□□□□ 0.51
RBFOX1-214ENST00000552089 RALGAPBQ86X10 1494 aa18.21■□□□□ 0.51
RBFOX1-214ENST00000552089 R3HDM1Q15032 1099 aaKnown RBP18.21■□□□□ 0.51
RBFOX1-214ENST00000552089 SPHKAPQ2M3C7 1700 aa18.21■□□□□ 0.51
RBFOX1-214ENST00000552089 GLI3P10071 1580 aa18.2■□□□□ 0.5
RBFOX1-214ENST00000552089 BAG6P46379 1132 aa18.2■□□□□ 0.5
RBFOX1-214ENST00000552089 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.2■□□□□ 0.5
RBFOX1-214ENST00000552089 MYOM2P54296 1465 aa18.19■□□□□ 0.5
RBFOX1-214ENST00000552089 MYO5BQ9ULV0 1848 aa18.19■□□□□ 0.5
RBFOX1-214ENST00000552089 GCC2Q8IWJ2 1684 aa18.18■□□□□ 0.5
RBFOX1-214ENST00000552089 SOS2Q07890 1332 aaPredicted RBP18.18■□□□□ 0.5
RBFOX1-214ENST00000552089 COL22A1Q8NFW1 1626 aaPredicted RBP18.18■□□□□ 0.5
RBFOX1-214ENST00000552089 LAMC1P11047 1609 aa18.18■□□□□ 0.5
RBFOX1-214ENST00000552089 BRWD3Q6RI45 1802 aa18.17■□□□□ 0.5
RBFOX1-214ENST00000552089 ADGRL3Q9HAR2 1447 aa18.16■□□□□ 0.5
RBFOX1-214ENST00000552089 TMEM131LA2VDJ0 1609 aa18.16■□□□□ 0.5
RBFOX1-214ENST00000552089 RRP7BPQ9NSQ0 103 aa18.15■□□□□ 0.5
RBFOX1-214ENST00000552089 XRN1Q8IZH2 1706 aaKnown RBP18.15■□□□□ 0.5
RBFOX1-214ENST00000552089 C1orf167Q5SNV9 1468 aa18.15■□□□□ 0.5
RBFOX1-214ENST00000552089 SEPT12Q8IYM1 358 aa18.15■□□□□ 0.5
RBFOX1-214ENST00000552089 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.14■□□□□ 0.49
RBFOX1-214ENST00000552089 KANK4Q5T7N3 995 aaPredicted RBP18.13■□□□□ 0.49
RBFOX1-214ENST00000552089 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
RBFOX1-214ENST00000552089 UNC5CLQ8IV45 518 aa18.12■□□□□ 0.49
RBFOX1-214ENST00000552089 CHGAP10645 457 aaKnown RBP18.11■□□□□ 0.49
RBFOX1-214ENST00000552089 RPRD2Q5VT52 1461 aaKnown RBP18.11■□□□□ 0.49
RBFOX1-214ENST00000552089 ZEB1P37275 1124 aaPredicted RBP18.1■□□□□ 0.49
RBFOX1-214ENST00000552089 EN1Q05925 392 aaPredicted RBP18.1■□□□□ 0.49
RBFOX1-214ENST00000552089 APLP2Q06481 763 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms