RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 CCDC141Q6ZP82 1450 aa7.35□□□□□ -1.23
CCNT1-204ENST00000551989 PRG4Q92954 1404 aaPredicted RBP7.35□□□□□ -1.23
CCNT1-204ENST00000551989 INSRP06213 1382 aa7.34□□□□□ -1.23
CCNT1-204ENST00000551989 FANCIQ9NVI1 1328 aa7.34□□□□□ -1.23
CCNT1-204ENST00000551989 ERICH6Q7L0X2 663 aa7.34□□□□□ -1.23
CCNT1-204ENST00000551989 PPP4R2Q9NY27 417 aa7.34□□□□□ -1.23
CCNT1-204ENST00000551989 MYT1LQ9UL68 1186 aa7.34□□□□□ -1.23
CCNT1-204ENST00000551989 SMG6Q86US8 1419 aaKnown RBP7.34□□□□□ -1.23
CCNT1-204ENST00000551989 USP47Q96K76 1375 aa7.33□□□□□ -1.24
CCNT1-204ENST00000551989 SAMD9LQ8IVG5 1584 aa7.33□□□□□ -1.24
CCNT1-204ENST00000551989 KIF7Q2M1P5 1343 aa7.33□□□□□ -1.24
CCNT1-204ENST00000551989 RNF17Q9BXT8 1623 aaKnown RBP7.33□□□□□ -1.24
CCNT1-204ENST00000551989 CHD1O14646 1710 aa7.32□□□□□ -1.24
CCNT1-204ENST00000551989 MAGI2Q86UL8 1455 aa7.32□□□□□ -1.24
CCNT1-204ENST00000551989 HIRIP3Q9BW71 556 aaPredicted RBP7.32□□□□□ -1.24
CCNT1-204ENST00000551989 FBXO3Q9UK99 471 aa7.32□□□□□ -1.24
CCNT1-204ENST00000551989 KIF15Q9NS87 1388 aa7.32□□□□□ -1.24
CCNT1-204ENST00000551989 FAM135AQ9P2D6 1515 aa7.32□□□□□ -1.24
CCNT1-204ENST00000551989 ATP10BO94823 1461 aa7.31□□□□□ -1.24
CCNT1-204ENST00000551989 PLEKHD1A6NEE1 506 aa7.31□□□□□ -1.24
CCNT1-204ENST00000551989 CHMP7Q8WUX9 453 aaPredicted RBP7.31□□□□□ -1.24
CCNT1-204ENST00000551989 NEURL4Q96JN8 1562 aa7.31□□□□□ -1.24
CCNT1-204ENST00000551989 MRS2Q9HD23 443 aa7.31□□□□□ -1.24
CCNT1-204ENST00000551989 RBM19Q9Y4C8 960 aaKnown RBP7.31□□□□□ -1.24
CCNT1-204ENST00000551989 ARAP3Q8WWN8 1544 aa7.31□□□□□ -1.24
CCNT1-204ENST00000551989 DHX29Q7Z478 1369 aaKnown RBP7.31□□□□□ -1.24
CCNT1-204ENST00000551989 ATP10AO60312 1499 aa7.3□□□□□ -1.24
CCNT1-204ENST00000551989 CEP152O94986 1710 aa7.3□□□□□ -1.24
CCNT1-204ENST00000551989 NBPF8Q3BBV2 869 aa7.3□□□□□ -1.24
CCNT1-204ENST00000551989 DCAF8Q5TAQ9 597 aa7.3□□□□□ -1.24
CCNT1-204ENST00000551989 PRDM15P57071 1507 aaPredicted RBP7.3□□□□□ -1.24
CCNT1-204ENST00000551989 DUOX2Q9NRD8 1548 aa7.3□□□□□ -1.24
CCNT1-204ENST00000551989 BRD4O60885 1362 aaPredicted RBP7.3□□□□□ -1.24
CCNT1-204ENST00000551989 KIAA1210Q9ULL0 1709 aa7.3□□□□□ -1.24
CCNT1-204ENST00000551989 TSPY4P0CV99 314 aa7.29□□□□□ -1.24
CCNT1-204ENST00000551989 TSPY10P0CW01 314 aa7.29□□□□□ -1.24
CCNT1-204ENST00000551989 PYGBP11216 843 aa7.29□□□□□ -1.24
CCNT1-204ENST00000551989 PLCG2P16885 1265 aa7.29□□□□□ -1.24
CCNT1-204ENST00000551989 BCANQ96GW7 911 aa7.29□□□□□ -1.24
CCNT1-204ENST00000551989 WASHC2CQ9Y4E1 1318 aa7.28□□□□□ -1.24
CCNT1-204ENST00000551989 ERBINQ96RT1 1412 aa7.28□□□□□ -1.24
CCNT1-204ENST00000551989 ABCC2Q92887 1545 aa7.28□□□□□ -1.24
CCNT1-204ENST00000551989 SPHKAPQ2M3C7 1700 aa7.28□□□□□ -1.24
CCNT1-204ENST00000551989 RALBP1Q15311 655 aa7.28□□□□□ -1.24
CCNT1-204ENST00000551989 SLAIN1Q8ND83 568 aa7.28□□□□□ -1.24
CCNT1-204ENST00000551989 JPH4Q96JJ6 628 aa7.28□□□□□ -1.24
CCNT1-204ENST00000551989 OCEL1Q9H607 264 aa7.28□□□□□ -1.24
CCNT1-204ENST00000551989 GPRASP1Q5JY77 1395 aa7.28□□□□□ -1.24
CCNT1-204ENST00000551989 RNF123Q5XPI4 1314 aa7.27□□□□□ -1.24
CCNT1-204ENST00000551989 PKD2Q13563 968 aa7.27□□□□□ -1.25
CCNT1-204ENST00000551989 PCDHB8Q9UN66 801 aa7.27□□□□□ -1.25
CCNT1-204ENST00000551989 NUDCQ9Y266 331 aa7.27□□□□□ -1.25
CCNT1-204ENST00000551989 NUP155O75694 1391 aa7.27□□□□□ -1.25
CCNT1-204ENST00000551989 LRPPRCP42704 1394 aaKnown RBP7.27□□□□□ -1.25
CCNT1-204ENST00000551989 IQGAP1P46940 1657 aa7.27□□□□□ -1.25
CCNT1-204ENST00000551989 DEPDC5O75140 1603 aa7.27□□□□□ -1.25
CCNT1-204ENST00000551989 CCDC144AA2RUR9 1427 aa7.27□□□□□ -1.25
CCNT1-204ENST00000551989 ZNF644Q9H582 1327 aaPredicted RBP7.27□□□□□ -1.25
CCNT1-204ENST00000551989 TTC37Q6PGP7 1564 aa7.26□□□□□ -1.25
CCNT1-204ENST00000551989 COL17A1Q9UMD9 1497 aaPredicted RBP7.26□□□□□ -1.25
CCNT1-204ENST00000551989 ST18O60284 1047 aa7.26□□□□□ -1.25
CCNT1-204ENST00000551989 CHRM1P11229 460 aaPredicted RBP7.26□□□□□ -1.25
CCNT1-204ENST00000551989 STAC3Q96MF2 364 aa7.26□□□□□ -1.25
CCNT1-204ENST00000551989 ARHGAP5Q13017 1502 aa7.26□□□□□ -1.25
CCNT1-204ENST00000551989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.26□□□□□ -1.25
CCNT1-204ENST00000551989 SYCP2Q9BX26 1530 aa7.26□□□□□ -1.25
CCNT1-204ENST00000551989 PRAG1Q86YV5 1406 aa7.26□□□□□ -1.25
CCNT1-204ENST00000551989 MYBBP1AQ9BQG0 1328 aaKnown RBP7.26□□□□□ -1.25
CCNT1-204ENST00000551989 UHRF1BP1LA0JNW5 1464 aa7.25□□□□□ -1.25
CCNT1-204ENST00000551989 C11orf95C9JLR9 678 aaPredicted RBP7.25□□□□□ -1.25
CCNT1-204ENST00000551989 VASPP50552 380 aaPredicted RBP7.25□□□□□ -1.25
CCNT1-204ENST00000551989 PDE3BQ13370 1112 aa7.25□□□□□ -1.25
CCNT1-204ENST00000551989 TET3O43151 1660 aa7.25□□□□□ -1.25
CCNT1-204ENST00000551989 WDR7Q9Y4E6 1490 aa7.24□□□□□ -1.25
CCNT1-204ENST00000551989 ABCC1P33527 1531 aa7.24□□□□□ -1.25
CCNT1-204ENST00000551989 SYNMO15061 1565 aa7.24□□□□□ -1.25
CCNT1-204ENST00000551989 ZCCHC11Q5TAX3 1644 aaKnown RBP7.23□□□□□ -1.25
CCNT1-204ENST00000551989 PARD3Q8TEW0 1356 aa7.23□□□□□ -1.25
CCNT1-204ENST00000551989 CLASP1Q7Z460 1538 aa7.23□□□□□ -1.25
CCNT1-204ENST00000551989 GSE1Q14687 1217 aa7.23□□□□□ -1.25
CCNT1-204ENST00000551989 CDAN1Q8IWY9 1227 aa7.23□□□□□ -1.25
CCNT1-204ENST00000551989 FAM9BQ8IZU0 186 aa7.23□□□□□ -1.25
CCNT1-204ENST00000551989 PDCD7Q8N8D1 485 aaKnown RBP7.23□□□□□ -1.25
CCNT1-204ENST00000551989 CARD11Q9BXL7 1154 aa7.23□□□□□ -1.25
CCNT1-204ENST00000551989 MADDQ8WXG6 1647 aa7.23□□□□□ -1.25
CCNT1-204ENST00000551989 TRPM2O94759 1503 aa7.22□□□□□ -1.25
CCNT1-204ENST00000551989 RTEL1-TNFRSF6BF6WH68 1400 aa7.22□□□□□ -1.25
CCNT1-204ENST00000551989 ZNF467Q7Z7K2 595 aaPredicted RBP7.22□□□□□ -1.25
CCNT1-204ENST00000551989 KIF1BO60333 1816 aa7.22□□□□□ -1.25
CCNT1-204ENST00000551989 ILDR1Q86SU0 546 aaPredicted RBP7.21□□□□□ -1.26
CCNT1-204ENST00000551989 PNISRQ8TF01 805 aaKnown RBP7.21□□□□□ -1.26
CCNT1-204ENST00000551989 ZNF777Q9ULD5 760 aaPredicted RBP7.21□□□□□ -1.26
CCNT1-204ENST00000551989 A2MP01023 1474 aa7.21□□□□□ -1.26
CCNT1-204ENST00000551989 KDM5AP29375 1690 aaKnown RBP7.21□□□□□ -1.26
CCNT1-204ENST00000551989 IFT172Q9UG01 1749 aa7.21□□□□□ -1.26
CCNT1-204ENST00000551989 BLMP54132 1417 aaPredicted RBP7.2□□□□□ -1.26
CCNT1-204ENST00000551989 ARID3CA6NKF2 412 aa7.2□□□□□ -1.26
CCNT1-204ENST00000551989 CCDC184Q52MB2 194 aa7.2□□□□□ -1.26
CCNT1-204ENST00000551989 NLRP13Q86W25 1043 aa7.2□□□□□ -1.26
CCNT1-204ENST00000551989 TMC1Q8TDI8 760 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms