RNA–Protein interactions for RNA: ENST00000551800.5

CDK4-209, Transcript of cyclin dependent kinase 4, humanhuman

TSL 5

Gene CDK4, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-209ENST00000551800 PPP1R15AO75807 674 aaPredicted RBP26.26■■□□□ 1.79
CDK4-209ENST00000551800 SLC52A1Q9NWF4 448 aa26.26■■□□□ 1.79
CDK4-209ENST00000551800 ROBO1Q9Y6N7 1651 aa26.25■■□□□ 1.79
CDK4-209ENST00000551800 TMEM131LA2VDJ0 1609 aa26.25■■□□□ 1.79
CDK4-209ENST00000551800 NKTRP30414 1462 aaKnown RBP26.23■■□□□ 1.79
CDK4-209ENST00000551800 SPHKAPQ2M3C7 1700 aa26.22■■□□□ 1.79
CDK4-209ENST00000551800 SLC26A8Q96RN1 970 aa26.21■■□□□ 1.79
CDK4-209ENST00000551800 CHGAP10645 457 aaKnown RBP26.2■■□□□ 1.78
CDK4-209ENST00000551800 HDGFP51858 240 aaKnown RBP26.19■■□□□ 1.78
CDK4-209ENST00000551800 TMEM94Q12767 1356 aa26.19■■□□□ 1.78
CDK4-209ENST00000551800 ITGAEP38570 1179 aa26.18■■□□□ 1.78
CDK4-209ENST00000551800 PHLPP1O60346 1717 aa26.17■■□□□ 1.78
CDK4-209ENST00000551800 RIMS2Q9UQ26 1411 aa26.17■■□□□ 1.78
CDK4-209ENST00000551800 PROSER2Q86WR7 435 aaPredicted RBP26.17■■□□□ 1.78
CDK4-209ENST00000551800 ROCK1Q13464 1354 aa26.17■■□□□ 1.78
CDK4-209ENST00000551800 KCNA6P17658 529 aa26.16■■□□□ 1.78
CDK4-209ENST00000551800 DIP2AQ14689 1571 aa26.15■■□□□ 1.78
CDK4-209ENST00000551800 MSH6P52701 1360 aa26.14■■□□□ 1.78
CDK4-209ENST00000551800 PLEKHG1Q9ULL1 1385 aa26.13■■□□□ 1.77
CDK4-209ENST00000551800 ZFYVE9O95405 1425 aa26.13■■□□□ 1.77
CDK4-209ENST00000551800 KIF1BO60333 1816 aa26.11■■□□□ 1.77
CDK4-209ENST00000551800 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.09■■□□□ 1.77
CDK4-209ENST00000551800 NUP155O75694 1391 aa26.07■■□□□ 1.76
CDK4-209ENST00000551800 FAM135BQ49AJ0 1406 aa26.07■■□□□ 1.76
CDK4-209ENST00000551800 RBM33Q96EV2 1170 aaKnown RBP26.07■■□□□ 1.76
CDK4-209ENST00000551800 TRPM2O94759 1503 aa26.07■■□□□ 1.76
CDK4-209ENST00000551800 C14orf37Q86TY3 774 aa26.06■■□□□ 1.76
CDK4-209ENST00000551800 PPARGC1BQ86YN6 1023 aaKnown RBP26.06■■□□□ 1.76
CDK4-209ENST00000551800 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.04■■□□□ 1.76
CDK4-209ENST00000551800 NUTM2DQ5VT03 806 aaPredicted RBP26■■□□□ 1.75
CDK4-209ENST00000551800 SETD1AO15047 1707 aaKnown RBP25.97■■□□□ 1.75
CDK4-209ENST00000551800 ZNF326Q5BKZ1 582 aaKnown RBP25.95■■□□□ 1.74
CDK4-209ENST00000551800 CLTCL1P53675 1640 aa25.95■■□□□ 1.74
CDK4-209ENST00000551800 TBX22Q9Y458 520 aa25.94■■□□□ 1.74
CDK4-209ENST00000551800 PIK3R4Q99570 1358 aa25.94■■□□□ 1.74
CDK4-209ENST00000551800 ADAMTS13Q76LX8 1427 aa25.93■■□□□ 1.74
CDK4-209ENST00000551800 COL16A1Q07092 1604 aaPredicted RBP25.92■■□□□ 1.74
CDK4-209ENST00000551800 NRXN3Q9Y4C0 1643 aa25.92■■□□□ 1.74
CDK4-209ENST00000551800 XRN1Q8IZH2 1706 aaKnown RBP25.92■■□□□ 1.74
CDK4-209ENST00000551800 NCOA3Q9Y6Q9 1424 aa25.92■■□□□ 1.74
CDK4-209ENST00000551800 SLAIN2Q9P270 581 aa25.92■■□□□ 1.74
CDK4-209ENST00000551800 SETBP1Q9Y6X0 1596 aa25.9■■□□□ 1.74
CDK4-209ENST00000551800 SHPRHQ149N8 1683 aa25.9■■□□□ 1.74
CDK4-209ENST00000551800 ATF3P18847 181 aa25.89■■□□□ 1.74
CDK4-209ENST00000551800 JCADQ9P266 1359 aa25.86■■□□□ 1.73
CDK4-209ENST00000551800 CADPS2Q86UW7 1296 aa25.86■■□□□ 1.73
CDK4-209ENST00000551800 AHDC1Q5TGY3 1603 aaPredicted RBP25.85■■□□□ 1.73
CDK4-209ENST00000551800 RRBP1Q9P2E9 1410 aaKnown RBP25.85■■□□□ 1.73
CDK4-209ENST00000551800 NALCNQ8IZF0 1738 aa25.84■■□□□ 1.73
CDK4-209ENST00000551800 NEXMIFQ5QGS0 1516 aa25.83■■□□□ 1.73
CDK4-209ENST00000551800 AMOTL2Q9Y2J4 779 aa25.82■■□□□ 1.72
CDK4-209ENST00000551800 PPLO60437 1756 aa25.8■■□□□ 1.72
CDK4-209ENST00000551800 MEX3CQ5U5Q3 659 aaKnown RBP25.8■■□□□ 1.72
CDK4-209ENST00000551800 C19orf44Q9H6X5 657 aa25.8■■□□□ 1.72
CDK4-209ENST00000551800 NHSL1Q5SYE7 1610 aa25.79■■□□□ 1.72
CDK4-209ENST00000551800 TRIM52Q96A61 297 aa25.79■■□□□ 1.72
CDK4-209ENST00000551800 DCCP43146 1447 aa25.79■■□□□ 1.72
CDK4-209ENST00000551800 NAIPQ13075 1403 aa25.79■■□□□ 1.72
CDK4-209ENST00000551800 PTPRUQ92729 1446 aa25.78■■□□□ 1.72
CDK4-209ENST00000551800 RGS17Q9UGC6 210 aaPredicted RBP25.76■■□□□ 1.71
CDK4-209ENST00000551800 ASXL1Q8IXJ9 1541 aa25.74■■□□□ 1.71
CDK4-209ENST00000551800 SPATA31A6Q5VVP1 1343 aa25.72■■□□□ 1.71
CDK4-209ENST00000551800 HFM1A2PYH4 1435 aa25.71■■□□□ 1.71
CDK4-209ENST00000551800 POTEAQ6S8J7 498 aa25.69■■□□□ 1.7
CDK4-209ENST00000551800 LRP6O75581 1613 aa25.69■■□□□ 1.7
CDK4-209ENST00000551800 ADGRL3Q9HAR2 1447 aa25.69■■□□□ 1.7
CDK4-209ENST00000551800 METP08581 1390 aa25.68■■□□□ 1.7
CDK4-209ENST00000551800 MST1RQ04912 1400 aa25.66■■□□□ 1.7
CDK4-209ENST00000551800 SLC4A1APQ9BWU0 796 aaKnown RBP25.66■■□□□ 1.7
CDK4-209ENST00000551800 BRINP3Q76B58 766 aa25.65■■□□□ 1.7
CDK4-209ENST00000551800 IFT172Q9UG01 1749 aa25.64■■□□□ 1.7
CDK4-209ENST00000551800 VGFO15240 615 aaPredicted RBP25.62■■□□□ 1.69
CDK4-209ENST00000551800 ZNF772Q68DY9 489 aaPredicted RBP25.62■■□□□ 1.69
CDK4-209ENST00000551800 NUTM2BA6NNL0 878 aaPredicted RBP25.61■■□□□ 1.69
CDK4-209ENST00000551800 NUTM2EB1AL46 878 aaPredicted RBP25.61■■□□□ 1.69
CDK4-209ENST00000551800 NUTM2AQ8IVF1 878 aaPredicted RBP25.61■■□□□ 1.69
CDK4-209ENST00000551800 PTCH1Q13635 1447 aa25.61■■□□□ 1.69
CDK4-209ENST00000551800 RPGRIP1LQ68CZ1 1315 aa25.57■■□□□ 1.68
CDK4-209ENST00000551800 CCDC144AA2RUR9 1427 aa25.56■■□□□ 1.68
CDK4-209ENST00000551800 SETD5Q9C0A6 1442 aa25.55■■□□□ 1.68
CDK4-209ENST00000551800 KNDC1Q76NI1 1749 aa25.54■■□□□ 1.68
CDK4-209ENST00000551800 LRRC59Q96AG4 307 aaKnown RBP25.54■■□□□ 1.68
CDK4-209ENST00000551800 LAMC1P11047 1609 aa25.53■■□□□ 1.68
CDK4-209ENST00000551800 C1orf167Q5SNV9 1468 aa25.51■■□□□ 1.67
CDK4-209ENST00000551800 CDC42BPGQ6DT37 1551 aa25.51■■□□□ 1.67
CDK4-209ENST00000551800 MARF1Q9Y4F3 1742 aaKnown RBP25.5■■□□□ 1.67
CDK4-209ENST00000551800 ROBO2Q9HCK4 1378 aa25.47■■□□□ 1.67
CDK4-209ENST00000551800 AFF2P51816 1311 aa25.47■■□□□ 1.67
CDK4-209ENST00000551800 FOXD1Q16676 465 aa25.47■■□□□ 1.67
CDK4-209ENST00000551800 PNPLA6Q8IY17 1366 aa25.46■■□□□ 1.67
CDK4-209ENST00000551800 RXRBP28702 533 aa25.46■■□□□ 1.67
CDK4-209ENST00000551800 DDX17Q92841 729 aaKnown RBP25.46■■□□□ 1.67
CDK4-209ENST00000551800 C8orf37Q96NL8 207 aa25.46■■□□□ 1.67
CDK4-209ENST00000551800 PRAG1Q86YV5 1406 aa25.46■■□□□ 1.67
CDK4-209ENST00000551800 RGL3Q3MIN7 710 aa25.43■■□□□ 1.66
CDK4-209ENST00000551800 COL22A1Q8NFW1 1626 aaPredicted RBP25.43■■□□□ 1.66
CDK4-209ENST00000551800 FMN2Q9NZ56 1722 aa25.42■■□□□ 1.66
CDK4-209ENST00000551800 KIF1AQ12756 1690 aa25.42■■□□□ 1.66
CDK4-209ENST00000551800 ANKRD30BQ9BXX2 1392 aa25.41■■□□□ 1.66
CDK4-209ENST00000551800 CDK12Q9NYV4 1490 aaPredicted RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms