RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 AEBP2Q6ZN18 517 aaPredicted RBP28.36■■■□□ 2.13
NPAS3-210ENST00000551492 ADGRF5Q8IZF2 1346 aa28.35■■■□□ 2.13
NPAS3-210ENST00000551492 ABCC3O15438 1527 aa28.33■■■□□ 2.13
NPAS3-210ENST00000551492 CLTCL1P53675 1640 aa28.33■■■□□ 2.13
NPAS3-210ENST00000551492 ST20-MTHFSA0A0A6YYL1 179 aa28.32■■■□□ 2.12
NPAS3-210ENST00000551492 CFAP70Q5T0N1 1121 aa28.32■■■□□ 2.12
NPAS3-210ENST00000551492 VWDEQ8N2E2 1590 aa28.31■■■□□ 2.12
NPAS3-210ENST00000551492 STAG3Q9UJ98 1225 aa28.31■■■□□ 2.12
NPAS3-210ENST00000551492 TET3O43151 1660 aa28.3■■■□□ 2.12
NPAS3-210ENST00000551492 TMEM132EQ6IEE7 984 aa28.29■■■□□ 2.12
NPAS3-210ENST00000551492 ROCK2O75116 1388 aaKnown RBP28.28■■■□□ 2.12
NPAS3-210ENST00000551492 EFCAB6Q5THR3 1501 aa28.28■■■□□ 2.12
NPAS3-210ENST00000551492 EIF2AK4Q9P2K8 1649 aaKnown RBP28.28■■■□□ 2.12
NPAS3-210ENST00000551492 ZMYM4Q5VZL5 1548 aa28.27■■■□□ 2.12
NPAS3-210ENST00000551492 WASHC2AQ641Q2 1341 aa28.26■■■□□ 2.11
NPAS3-210ENST00000551492 PDE4CQ08493 712 aa28.26■■■□□ 2.11
NPAS3-210ENST00000551492 SPHKAPQ2M3C7 1700 aa28.26■■■□□ 2.11
NPAS3-210ENST00000551492 RSPH6AQ9H0K4 717 aa28.25■■■□□ 2.11
NPAS3-210ENST00000551492 PTPRTO14522 1441 aa28.25■■■□□ 2.11
NPAS3-210ENST00000551492 SPATA31E1Q6ZUB1 1445 aa28.25■■■□□ 2.11
NPAS3-210ENST00000551492 RBM10P98175 930 aaKnown RBP28.24■■■□□ 2.11
NPAS3-210ENST00000551492 RNF17Q9BXT8 1623 aaKnown RBP28.23■■■□□ 2.11
NPAS3-210ENST00000551492 USP47Q96K76 1375 aa28.23■■■□□ 2.11
NPAS3-210ENST00000551492 FGD1P98174 961 aa28.2■■■□□ 2.11
NPAS3-210ENST00000551492 SAFB2Q14151 953 aaKnown RBP eCLIP28.19■■■□□ 2.1
NPAS3-210ENST00000551492 TRPM2O94759 1503 aa28.19■■■□□ 2.1
NPAS3-210ENST00000551492 ZMYM3Q14202 1370 aa28.19■■■□□ 2.1
NPAS3-210ENST00000551492 CLTCQ00610 1675 aaKnown RBP28.19■■■□□ 2.1
NPAS3-210ENST00000551492 PRAG1Q86YV5 1406 aa28.18■■■□□ 2.1
NPAS3-210ENST00000551492 NOS1P29475 1434 aa28.18■■■□□ 2.1
NPAS3-210ENST00000551492 CAMSAP1Q5T5Y3 1602 aa28.18■■■□□ 2.1
NPAS3-210ENST00000551492 ARHGEF40Q8TER5 1519 aa28.16■■■□□ 2.1
NPAS3-210ENST00000551492 STK26Q9P289 416 aa28.16■■■□□ 2.1
NPAS3-210ENST00000551492 AAMPQ13685 434 aa28.15■■■□□ 2.1
NPAS3-210ENST00000551492 TRAK1Q9UPV9 953 aa28.13■■■□□ 2.09
NPAS3-210ENST00000551492 MROH2AA6NES4 1674 aa28.13■■■□□ 2.09
NPAS3-210ENST00000551492 ZBTB47Q9UFB7 747 aaPredicted RBP28.12■■■□□ 2.09
NPAS3-210ENST00000551492 SYNMO15061 1565 aa28.11■■■□□ 2.09
NPAS3-210ENST00000551492 KIF7Q2M1P5 1343 aa28.11■■■□□ 2.09
NPAS3-210ENST00000551492 NEFMP07197 916 aa28.1■■■□□ 2.09
NPAS3-210ENST00000551492 IPO9Q96P70 1041 aaKnown RBP28.09■■■□□ 2.09
NPAS3-210ENST00000551492 LMTK2Q8IWU2 1503 aa28.09■■■□□ 2.09
NPAS3-210ENST00000551492 BCL11BQ9C0K0 894 aaPredicted RBP28.08■■■□□ 2.09
NPAS3-210ENST00000551492 LAS1LQ9Y4W2 734 aaKnown RBP28.08■■■□□ 2.09
NPAS3-210ENST00000551492 UHRF1BP1Q6BDS2 1440 aa28.04■■■□□ 2.08
NPAS3-210ENST00000551492 MYO5BQ9ULV0 1848 aa28.04■■■□□ 2.08
NPAS3-210ENST00000551492 B4GALNT3Q6L9W6 998 aa28.03■■■□□ 2.08
NPAS3-210ENST00000551492 KIF1BO60333 1816 aa28.02■■■□□ 2.08
NPAS3-210ENST00000551492 SENP3-EIF4A1A0A087X0R7 540 aa28.02■■■□□ 2.08
NPAS3-210ENST00000551492 CNTLNQ9NXG0 1405 aa28.02■■■□□ 2.08
NPAS3-210ENST00000551492 SLC52A1Q9NWF4 448 aa28.01■■■□□ 2.08
NPAS3-210ENST00000551492 PDIA4P13667 645 aaKnown RBP28.01■■■□□ 2.07
NPAS3-210ENST00000551492 RALGAPBQ86X10 1494 aa28■■■□□ 2.07
NPAS3-210ENST00000551492 ERVK-7P63135 1459 aa28■■■□□ 2.07
NPAS3-210ENST00000551492 BCORL1Q5H9F3 1711 aa28■■■□□ 2.07
NPAS3-210ENST00000551492 CCDC7Q96M83 1385 aa27.99■■■□□ 2.07
NPAS3-210ENST00000551492 AGLP35573 1532 aa27.98■■■□□ 2.07
NPAS3-210ENST00000551492 ANP32AP39687 249 aaKnown RBP27.98■■■□□ 2.07
NPAS3-210ENST00000551492 PREX1Q8TCU6 1659 aa27.98■■■□□ 2.07
NPAS3-210ENST00000551492 TRPM1Q7Z4N2 1603 aa27.94■■■□□ 2.06
NPAS3-210ENST00000551492 ARHGAP31Q2M1Z3 1444 aa27.94■■■□□ 2.06
NPAS3-210ENST00000551492 TESK2Q96S53 571 aa27.93■■■□□ 2.06
NPAS3-210ENST00000551492 DISP3Q9P2K9 1392 aa27.93■■■□□ 2.06
NPAS3-210ENST00000551492 VGFO15240 615 aaPredicted RBP27.91■■■□□ 2.06
NPAS3-210ENST00000551492 SLC26A8Q96RN1 970 aa27.91■■■□□ 2.06
NPAS3-210ENST00000551492 MADDQ8WXG6 1647 aa27.9■■■□□ 2.06
NPAS3-210ENST00000551492 ADGRB3O60242 1522 aa27.9■■■□□ 2.06
NPAS3-210ENST00000551492 PPP4R2Q9NY27 417 aa27.9■■■□□ 2.06
NPAS3-210ENST00000551492 TNRQ92752 1358 aa27.89■■■□□ 2.06
NPAS3-210ENST00000551492 LTKP29376 864 aa27.89■■■□□ 2.06
NPAS3-210ENST00000551492 CCDC184Q52MB2 194 aa27.89■■■□□ 2.06
NPAS3-210ENST00000551492 PIK3C2BO00750 1634 aa27.89■■■□□ 2.06
NPAS3-210ENST00000551492 REREQ9P2R6 1566 aa27.87■■■□□ 2.05
NPAS3-210ENST00000551492 PPP6R1Q9UPN7 881 aa27.87■■■□□ 2.05
NPAS3-210ENST00000551492 C14orf93Q9H972 538 aaKnown RBP27.87■■■□□ 2.05
NPAS3-210ENST00000551492 HSP90AA2PQ14568 343 aaPredicted RBP27.85■■■□□ 2.05
NPAS3-210ENST00000551492 ANP32CO43423 234 aa27.85■■■□□ 2.05
NPAS3-210ENST00000551492 WAPLQ7Z5K2 1190 aa27.85■■■□□ 2.05
NPAS3-210ENST00000551492 RBM33Q96EV2 1170 aaKnown RBP27.84■■■□□ 2.05
NPAS3-210ENST00000551492 ZC3H13Q5T200 1668 aaKnown RBP27.83■■■□□ 2.05
NPAS3-210ENST00000551492 GSE1Q14687 1217 aa27.82■■■□□ 2.04
NPAS3-210ENST00000551492 TXNDC2Q86VQ3 553 aa27.81■■■□□ 2.04
NPAS3-210ENST00000551492 TMEM131LA2VDJ0 1609 aa27.81■■■□□ 2.04
NPAS3-210ENST00000551492 A2ML1A8K2U0 1454 aa27.8■■■□□ 2.04
NPAS3-210ENST00000551492 MINK1Q8N4C8 1332 aaPredicted RBP27.8■■■□□ 2.04
NPAS3-210ENST00000551492 FAM43AQ8N2R8 423 aa27.79■■■□□ 2.04
NPAS3-210ENST00000551492 NUTM2FA1L443 756 aa27.79■■■□□ 2.04
NPAS3-210ENST00000551492 NEXMIFQ5QGS0 1516 aa27.79■■■□□ 2.04
NPAS3-210ENST00000551492 GPRASP1Q5JY77 1395 aa27.78■■■□□ 2.04
NPAS3-210ENST00000551492 RIMS2Q9UQ26 1411 aa27.78■■■□□ 2.04
NPAS3-210ENST00000551492 USP35Q9P2H5 1018 aa27.77■■■□□ 2.04
NPAS3-210ENST00000551492 PIK3C2GO75747 1445 aa27.77■■■□□ 2.04
NPAS3-210ENST00000551492 CC2D1BQ5T0F9 858 aaKnown RBP27.77■■■□□ 2.04
NPAS3-210ENST00000551492 PPLO60437 1756 aa27.76■■■□□ 2.04
NPAS3-210ENST00000551492 TMC1Q8TDI8 760 aa27.76■■■□□ 2.03
NPAS3-210ENST00000551492 PRAM1Q96QH2 718 aa27.75■■■□□ 2.03
NPAS3-210ENST00000551492 PANK3Q9H999 370 aa27.75■■■□□ 2.03
NPAS3-210ENST00000551492 FER1L4A9Z1Z3 1794 aa27.75■■■□□ 2.03
NPAS3-210ENST00000551492 TMF1P82094 1093 aa27.75■■■□□ 2.03
NPAS3-210ENST00000551492 RPGRIP1LQ68CZ1 1315 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms