RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 ANKRD50Q9ULJ7 1429 aa11.12□□□□□ -0.63
SMARCD1-210ENST00000551352 RPRD2Q5VT52 1461 aaKnown RBP11.12□□□□□ -0.63
SMARCD1-210ENST00000551352 NRXN3Q9Y4C0 1643 aa11.11□□□□□ -0.63
SMARCD1-210ENST00000551352 SENP3Q9H4L4 574 aaPredicted RBP11.11□□□□□ -0.63
SMARCD1-210ENST00000551352 SPHKAPQ2M3C7 1700 aa11.1□□□□□ -0.63
SMARCD1-210ENST00000551352 TMEM94Q12767 1356 aa11.1□□□□□ -0.63
SMARCD1-210ENST00000551352 NKTRP30414 1462 aaKnown RBP11.1□□□□□ -0.63
SMARCD1-210ENST00000551352 RBM33Q96EV2 1170 aaKnown RBP11.09□□□□□ -0.63
SMARCD1-210ENST00000551352 PHLPP1O60346 1717 aa11.09□□□□□ -0.63
SMARCD1-210ENST00000551352 FAM50AQ14320 339 aaKnown RBP11.08□□□□□ -0.64
SMARCD1-210ENST00000551352 SLC26A8Q96RN1 970 aa11.08□□□□□ -0.64
SMARCD1-210ENST00000551352 RGS17Q9UGC6 210 aaPredicted RBP11.08□□□□□ -0.64
SMARCD1-210ENST00000551352 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.08□□□□□ -0.64
SMARCD1-210ENST00000551352 COL16A1Q07092 1604 aaPredicted RBP11.07□□□□□ -0.64
SMARCD1-210ENST00000551352 FAM135BQ49AJ0 1406 aa11.07□□□□□ -0.64
SMARCD1-210ENST00000551352 ADAMTS13Q76LX8 1427 aa11.07□□□□□ -0.64
SMARCD1-210ENST00000551352 RIMS2Q9UQ26 1411 aa11.07□□□□□ -0.64
SMARCD1-210ENST00000551352 SETD1AO15047 1707 aaKnown RBP11.06□□□□□ -0.64
SMARCD1-210ENST00000551352 XRN1Q8IZH2 1706 aaKnown RBP11.06□□□□□ -0.64
SMARCD1-210ENST00000551352 KCNA6P17658 529 aa11.06□□□□□ -0.64
SMARCD1-210ENST00000551352 EID1Q9Y6B2 187 aa11.06□□□□□ -0.64
SMARCD1-210ENST00000551352 PLEKHG1Q9ULL1 1385 aa11.05□□□□□ -0.64
SMARCD1-210ENST00000551352 ZEB1P37275 1124 aaPredicted RBP11.05□□□□□ -0.64
SMARCD1-210ENST00000551352 CLTCL1P53675 1640 aa11.05□□□□□ -0.64
SMARCD1-210ENST00000551352 ROCK1Q13464 1354 aa11.04□□□□□ -0.64
SMARCD1-210ENST00000551352 DIP2AQ14689 1571 aa11.04□□□□□ -0.64
SMARCD1-210ENST00000551352 PTPRUQ92729 1446 aa11.03□□□□□ -0.64
SMARCD1-210ENST00000551352 SLC52A1Q9NWF4 448 aa11.03□□□□□ -0.64
SMARCD1-210ENST00000551352 STAG3Q9UJ98 1225 aa11.03□□□□□ -0.64
SMARCD1-210ENST00000551352 NALCNQ8IZF0 1738 aa11.01□□□□□ -0.65
SMARCD1-210ENST00000551352 PROSER2Q86WR7 435 aaPredicted RBP11.01□□□□□ -0.65
SMARCD1-210ENST00000551352 CCER1Q8TC90 406 aaPredicted RBP11.01□□□□□ -0.65
SMARCD1-210ENST00000551352 SHPRHQ149N8 1683 aa11.01□□□□□ -0.65
SMARCD1-210ENST00000551352 KIF1BO60333 1816 aa11□□□□□ -0.65
SMARCD1-210ENST00000551352 SETBP1Q9Y6X0 1596 aa11□□□□□ -0.65
SMARCD1-210ENST00000551352 LRP6O75581 1613 aa11□□□□□ -0.65
SMARCD1-210ENST00000551352 AHDC1Q5TGY3 1603 aaPredicted RBP11□□□□□ -0.65
SMARCD1-210ENST00000551352 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
SMARCD1-210ENST00000551352 TRPM2O94759 1503 aa10.99□□□□□ -0.65
SMARCD1-210ENST00000551352 NEXMIFQ5QGS0 1516 aa10.99□□□□□ -0.65
SMARCD1-210ENST00000551352 NHSL1Q5SYE7 1610 aa10.99□□□□□ -0.65
SMARCD1-210ENST00000551352 POTEAQ6S8J7 498 aa10.98□□□□□ -0.65
SMARCD1-210ENST00000551352 PHF23Q9BUL5 403 aaPredicted RBP10.97□□□□□ -0.65
SMARCD1-210ENST00000551352 TBX22Q9Y458 520 aa10.97□□□□□ -0.65
SMARCD1-210ENST00000551352 NUP155O75694 1391 aa10.97□□□□□ -0.65
SMARCD1-210ENST00000551352 PPLO60437 1756 aa10.97□□□□□ -0.65
SMARCD1-210ENST00000551352 MSH6P52701 1360 aa10.96□□□□□ -0.65
SMARCD1-210ENST00000551352 ITGAEP38570 1179 aa10.95□□□□□ -0.66
SMARCD1-210ENST00000551352 NAIPQ13075 1403 aa10.94□□□□□ -0.66
SMARCD1-210ENST00000551352 NCOA3Q9Y6Q9 1424 aa10.94□□□□□ -0.66
SMARCD1-210ENST00000551352 CHGAP10645 457 aaKnown RBP10.94□□□□□ -0.66
SMARCD1-210ENST00000551352 SLAIN2Q9P270 581 aa10.94□□□□□ -0.66
SMARCD1-210ENST00000551352 IFT172Q9UG01 1749 aa10.94□□□□□ -0.66
SMARCD1-210ENST00000551352 PIK3R4Q99570 1358 aa10.93□□□□□ -0.66
SMARCD1-210ENST00000551352 PPP1R15AO75807 674 aaPredicted RBP10.93□□□□□ -0.66
SMARCD1-210ENST00000551352 BCANQ96GW7 911 aa10.93□□□□□ -0.66
SMARCD1-210ENST00000551352 METP08581 1390 aa10.92□□□□□ -0.66
SMARCD1-210ENST00000551352 LAMC1P11047 1609 aa10.92□□□□□ -0.66
SMARCD1-210ENST00000551352 ASXL1Q8IXJ9 1541 aa10.92□□□□□ -0.66
SMARCD1-210ENST00000551352 MST1RQ04912 1400 aa10.92□□□□□ -0.66
SMARCD1-210ENST00000551352 SETD5Q9C0A6 1442 aa10.92□□□□□ -0.66
SMARCD1-210ENST00000551352 JCADQ9P266 1359 aa10.91□□□□□ -0.66
SMARCD1-210ENST00000551352 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMARCD1-210ENST00000551352 DHX57Q6P158 1386 aaKnown RBP10.9□□□□□ -0.66
SMARCD1-210ENST00000551352 RAB3GAP2Q9H2M9 1393 aa10.9□□□□□ -0.66
SMARCD1-210ENST00000551352 AMOTL2Q9Y2J4 779 aa10.9□□□□□ -0.66
SMARCD1-210ENST00000551352 DCCP43146 1447 aa10.89□□□□□ -0.67
SMARCD1-210ENST00000551352 ADGRL3Q9HAR2 1447 aa10.88□□□□□ -0.67
SMARCD1-210ENST00000551352 HFM1A2PYH4 1435 aa10.87□□□□□ -0.67
SMARCD1-210ENST00000551352 BRINP3Q76B58 766 aa10.87□□□□□ -0.67
SMARCD1-210ENST00000551352 CLSPNQ9HAW4 1339 aa10.86□□□□□ -0.67
SMARCD1-210ENST00000551352 HDGFP51858 240 aaKnown RBP10.86□□□□□ -0.67
SMARCD1-210ENST00000551352 C19orf44Q9H6X5 657 aa10.86□□□□□ -0.67
SMARCD1-210ENST00000551352 PRAG1Q86YV5 1406 aa10.85□□□□□ -0.67
SMARCD1-210ENST00000551352 MARF1Q9Y4F3 1742 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-210ENST00000551352 DDX17Q92841 729 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-210ENST00000551352 KNDC1Q76NI1 1749 aa10.84□□□□□ -0.67
SMARCD1-210ENST00000551352 CADPS2Q86UW7 1296 aa10.84□□□□□ -0.67
SMARCD1-210ENST00000551352 RGPD8O14715 1765 aaPredicted RBP10.84□□□□□ -0.67
SMARCD1-210ENST00000551352 COL22A1Q8NFW1 1626 aaPredicted RBP10.84□□□□□ -0.67
SMARCD1-210ENST00000551352 PTCH1Q13635 1447 aa10.84□□□□□ -0.67
SMARCD1-210ENST00000551352 ROBO2Q9HCK4 1378 aa10.83□□□□□ -0.68
SMARCD1-210ENST00000551352 C14orf37Q86TY3 774 aa10.83□□□□□ -0.68
SMARCD1-210ENST00000551352 SPATA31A6Q5VVP1 1343 aa10.83□□□□□ -0.68
SMARCD1-210ENST00000551352 C1orf167Q5SNV9 1468 aa10.82□□□□□ -0.68
SMARCD1-210ENST00000551352 PNPLA6Q8IY17 1366 aa10.82□□□□□ -0.68
SMARCD1-210ENST00000551352 ATF3P18847 181 aa10.82□□□□□ -0.68
SMARCD1-210ENST00000551352 ZNF326Q5BKZ1 582 aaKnown RBP10.82□□□□□ -0.68
SMARCD1-210ENST00000551352 FMN2Q9NZ56 1722 aa10.81□□□□□ -0.68
SMARCD1-210ENST00000551352 CDC42BPGQ6DT37 1551 aa10.81□□□□□ -0.68
SMARCD1-210ENST00000551352 SPATA31E1Q6ZUB1 1445 aa10.8□□□□□ -0.68
SMARCD1-210ENST00000551352 FOXD1Q16676 465 aa10.79□□□□□ -0.68
SMARCD1-210ENST00000551352 CDK12Q9NYV4 1490 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-210ENST00000551352 RGS12O14924 1447 aa10.77□□□□□ -0.68
SMARCD1-210ENST00000551352 PXDNQ92626 1479 aa10.77□□□□□ -0.69
SMARCD1-210ENST00000551352 NUTM2BA6NNL0 878 aaPredicted RBP10.77□□□□□ -0.69
SMARCD1-210ENST00000551352 NUTM2EB1AL46 878 aaPredicted RBP10.77□□□□□ -0.69
SMARCD1-210ENST00000551352 NUTM2AQ8IVF1 878 aaPredicted RBP10.77□□□□□ -0.69
SMARCD1-210ENST00000551352 ABCA3Q99758 1704 aa10.77□□□□□ -0.69
SMARCD1-210ENST00000551352 AFF2P51816 1311 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms