RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 MROH2AA6NES4 1674 aa19.92■□□□□ 0.78
SCN8A-207ENST00000551216 TESK2Q96S53 571 aa19.91■□□□□ 0.78
SCN8A-207ENST00000551216 PPLO60437 1756 aa19.91■□□□□ 0.78
SCN8A-207ENST00000551216 SETBP1Q9Y6X0 1596 aa19.91■□□□□ 0.78
SCN8A-207ENST00000551216 DNAJC5Q9H3Z4 198 aa19.91■□□□□ 0.78
SCN8A-207ENST00000551216 TMF1P82094 1093 aa19.9■□□□□ 0.78
SCN8A-207ENST00000551216 CDCA8Q53HL2 280 aa19.88■□□□□ 0.77
SCN8A-207ENST00000551216 SIGLEC1Q9BZZ2 1709 aa19.88■□□□□ 0.77
SCN8A-207ENST00000551216 SLC52A1Q9NWF4 448 aa19.87■□□□□ 0.77
SCN8A-207ENST00000551216 SYNMO15061 1565 aa19.86■□□□□ 0.77
SCN8A-207ENST00000551216 CFAP65Q6ZU64 1925 aaKnown RBP19.85■□□□□ 0.77
SCN8A-207ENST00000551216 ARHGEF40Q8TER5 1519 aa19.84■□□□□ 0.77
SCN8A-207ENST00000551216 RALBP1Q15311 655 aa19.84■□□□□ 0.77
SCN8A-207ENST00000551216 PREX1Q8TCU6 1659 aa19.83■□□□□ 0.77
SCN8A-207ENST00000551216 MYO3AQ8NEV4 1616 aa19.83■□□□□ 0.76
SCN8A-207ENST00000551216 PIK3C2GO75747 1445 aa19.83■□□□□ 0.76
SCN8A-207ENST00000551216 ZFYVE9O95405 1425 aa19.83■□□□□ 0.76
SCN8A-207ENST00000551216 POLR3GLQ9BT43 218 aa19.82■□□□□ 0.76
SCN8A-207ENST00000551216 SBNO2Q9Y2G9 1366 aa19.82■□□□□ 0.76
SCN8A-207ENST00000551216 DISP3Q9P2K9 1392 aa19.81■□□□□ 0.76
SCN8A-207ENST00000551216 MRS2Q9HD23 443 aa19.8■□□□□ 0.76
SCN8A-207ENST00000551216 ADGRF5Q8IZF2 1346 aa19.8■□□□□ 0.76
SCN8A-207ENST00000551216 VGFO15240 615 aaPredicted RBP19.77■□□□□ 0.76
SCN8A-207ENST00000551216 NEXMIFQ5QGS0 1516 aa19.77■□□□□ 0.76
SCN8A-207ENST00000551216 C14orf93Q9H972 538 aaKnown RBP19.76■□□□□ 0.75
SCN8A-207ENST00000551216 BRD4O60885 1362 aaPredicted RBP19.76■□□□□ 0.75
SCN8A-207ENST00000551216 PER1O15534 1290 aaPredicted RBP19.76■□□□□ 0.75
SCN8A-207ENST00000551216 MYBBP1AQ9BQG0 1328 aaKnown RBP19.75■□□□□ 0.75
SCN8A-207ENST00000551216 KDM5AP29375 1690 aaKnown RBP19.75■□□□□ 0.75
SCN8A-207ENST00000551216 TMEM131LA2VDJ0 1609 aa19.75■□□□□ 0.75
SCN8A-207ENST00000551216 CFAP70Q5T0N1 1121 aa19.75■□□□□ 0.75
SCN8A-207ENST00000551216 PARD3Q8TEW0 1356 aa19.75■□□□□ 0.75
SCN8A-207ENST00000551216 ERVK-7P63135 1459 aa19.74■□□□□ 0.75
SCN8A-207ENST00000551216 ADGRB1O14514 1584 aa19.74■□□□□ 0.75
SCN8A-207ENST00000551216 CHGAP10645 457 aaKnown RBP19.73■□□□□ 0.75
SCN8A-207ENST00000551216 HNRNPUQ00839 825 aaKnown RBP eCLIP19.72■□□□□ 0.75
SCN8A-207ENST00000551216 IDI1Q13907 227 aa19.72■□□□□ 0.75
SCN8A-207ENST00000551216 SPATA31D1Q6ZQQ2 1576 aa19.72■□□□□ 0.75
SCN8A-207ENST00000551216 CCDC184Q52MB2 194 aa19.71■□□□□ 0.75
SCN8A-207ENST00000551216 CLTCQ00610 1675 aaKnown RBP19.7■□□□□ 0.74
SCN8A-207ENST00000551216 NPC1L1Q9UHC9 1359 aa19.69■□□□□ 0.74
SCN8A-207ENST00000551216 ZBED9Q6R2W3 1325 aa19.68■□□□□ 0.74
SCN8A-207ENST00000551216 NLRP13Q86W25 1043 aa19.68■□□□□ 0.74
SCN8A-207ENST00000551216 MYOM1P52179 1685 aa19.67■□□□□ 0.74
SCN8A-207ENST00000551216 TMC1Q8TDI8 760 aa19.67■□□□□ 0.74
SCN8A-207ENST00000551216 PUS7Q96PZ0 661 aaKnown RBP19.67■□□□□ 0.74
SCN8A-207ENST00000551216 PANK3Q9H999 370 aa19.67■□□□□ 0.74
SCN8A-207ENST00000551216 INSRP06213 1382 aa19.67■□□□□ 0.74
SCN8A-207ENST00000551216 MYO5BQ9ULV0 1848 aa19.66■□□□□ 0.74
SCN8A-207ENST00000551216 CENPJQ9HC77 1338 aaPredicted RBP19.66■□□□□ 0.74
SCN8A-207ENST00000551216 FAM9BQ8IZU0 186 aa19.65■□□□□ 0.74
SCN8A-207ENST00000551216 PNISRQ8TF01 805 aaKnown RBP19.65■□□□□ 0.74
SCN8A-207ENST00000551216 LRPPRCP42704 1394 aaKnown RBP19.64■□□□□ 0.73
SCN8A-207ENST00000551216 QRICH2Q9H0J4 1663 aa19.63■□□□□ 0.73
SCN8A-207ENST00000551216 KNSTRNQ9Y448 316 aa19.62■□□□□ 0.73
SCN8A-207ENST00000551216 ASXL1Q8IXJ9 1541 aa19.61■□□□□ 0.73
SCN8A-207ENST00000551216 ARHGEF28Q8N1W1 1705 aaKnown RBP19.61■□□□□ 0.73
SCN8A-207ENST00000551216 ESF1Q9H501 851 aaKnown RBP19.58■□□□□ 0.72
SCN8A-207ENST00000551216 FBXO31Q5XUX0 539 aaPredicted RBP19.57■□□□□ 0.72
SCN8A-207ENST00000551216 SUPT16HQ9Y5B9 1047 aaKnown RBP19.57■□□□□ 0.72
SCN8A-207ENST00000551216 A2ML1A8K2U0 1454 aa19.57■□□□□ 0.72
SCN8A-207ENST00000551216 NEFLP07196 543 aa19.56■□□□□ 0.72
SCN8A-207ENST00000551216 ZMYM3Q14202 1370 aa19.56■□□□□ 0.72
SCN8A-207ENST00000551216 AMER1Q5JTC6 1135 aaPredicted RBP19.55■□□□□ 0.72
SCN8A-207ENST00000551216 STAG3Q9UJ98 1225 aa19.54■□□□□ 0.72
SCN8A-207ENST00000551216 TRAK1Q9UPV9 953 aa19.54■□□□□ 0.72
SCN8A-207ENST00000551216 ALKQ9UM73 1620 aa19.52■□□□□ 0.72
SCN8A-207ENST00000551216 NINLQ9Y2I6 1382 aa19.52■□□□□ 0.72
SCN8A-207ENST00000551216 EVC2Q86UK5 1308 aa19.52■□□□□ 0.71
SCN8A-207ENST00000551216 USP32Q8NFA0 1604 aa19.52■□□□□ 0.71
SCN8A-207ENST00000551216 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.51■□□□□ 0.71
SCN8A-207ENST00000551216 HDGFP51858 240 aaKnown RBP19.51■□□□□ 0.71
SCN8A-207ENST00000551216 CC2D1BQ5T0F9 858 aaKnown RBP19.51■□□□□ 0.71
SCN8A-207ENST00000551216 TMEM132EQ6IEE7 984 aa19.51■□□□□ 0.71
SCN8A-207ENST00000551216 DLC1Q96QB1 1528 aa19.5■□□□□ 0.71
SCN8A-207ENST00000551216 SMG6Q86US8 1419 aaKnown RBP19.49■□□□□ 0.71
SCN8A-207ENST00000551216 YTHDC2Q9H6S0 1430 aaKnown RBP19.49■□□□□ 0.71
SCN8A-207ENST00000551216 RIMS2Q9UQ26 1411 aa19.49■□□□□ 0.71
SCN8A-207ENST00000551216 ERICH6BQ5W0A0 696 aa19.48■□□□□ 0.71
SCN8A-207ENST00000551216 PTPRMP28827 1452 aa19.48■□□□□ 0.71
SCN8A-207ENST00000551216 CNGB1Q14028 1251 aaPredicted RBP19.47■□□□□ 0.71
SCN8A-207ENST00000551216 PELP1Q8IZL8 1130 aaKnown RBP19.47■□□□□ 0.71
SCN8A-207ENST00000551216 TNRQ92752 1358 aa19.47■□□□□ 0.71
SCN8A-207ENST00000551216 MLECQ14165 292 aa19.47■□□□□ 0.71
SCN8A-207ENST00000551216 SETD1AO15047 1707 aaKnown RBP19.46■□□□□ 0.71
SCN8A-207ENST00000551216 TULP4Q9NRJ4 1543 aa19.46■□□□□ 0.71
SCN8A-207ENST00000551216 BLMP54132 1417 aaPredicted RBP19.45■□□□□ 0.7
SCN8A-207ENST00000551216 NLRP1Q9C000 1473 aa19.45■□□□□ 0.7
SCN8A-207ENST00000551216 PPP2R1AP30153 589 aa19.44■□□□□ 0.7
SCN8A-207ENST00000551216 NUTM2DQ5VT03 806 aaPredicted RBP19.44■□□□□ 0.7
SCN8A-207ENST00000551216 UBR1Q8IWV7 1749 aa19.43■□□□□ 0.7
SCN8A-207ENST00000551216 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
SCN8A-207ENST00000551216 NSD2O96028 1365 aa19.43■□□□□ 0.7
SCN8A-207ENST00000551216 FKBP8Q14318 412 aa19.42■□□□□ 0.7
SCN8A-207ENST00000551216 ATAD2Q6PL18 1390 aa19.42■□□□□ 0.7
SCN8A-207ENST00000551216 CARD14Q9BXL6 1004 aa19.41■□□□□ 0.7
SCN8A-207ENST00000551216 ANKRD36BQ8N2N9 1353 aa19.41■□□□□ 0.7
SCN8A-207ENST00000551216 ABCC11Q96J66 1382 aa19.41■□□□□ 0.7
SCN8A-207ENST00000551216 NRXN3Q9Y4C0 1643 aa19.4■□□□□ 0.7
SCN8A-207ENST00000551216 SIRT1Q96EB6 747 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms