RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 CHD2O14647 1828 aaKnown RBP17.67■□□□□ 0.42
CPNE8-207ENST00000550863 SLC26A8Q96RN1 970 aa17.64■□□□□ 0.41
CPNE8-207ENST00000550863 EID1Q9Y6B2 187 aa17.64■□□□□ 0.41
CPNE8-207ENST00000550863 RIMS2Q9UQ26 1411 aa17.63■□□□□ 0.41
CPNE8-207ENST00000550863 TOM1O60784 492 aa17.62■□□□□ 0.41
CPNE8-207ENST00000550863 RBM33Q96EV2 1170 aaKnown RBP17.62■□□□□ 0.41
CPNE8-207ENST00000550863 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
CPNE8-207ENST00000550863 CLTCL1P53675 1640 aa17.61■□□□□ 0.41
CPNE8-207ENST00000550863 NRXN3Q9Y4C0 1643 aa17.61■□□□□ 0.41
CPNE8-207ENST00000550863 ROBO1Q9Y6N7 1651 aa17.61■□□□□ 0.41
CPNE8-207ENST00000550863 NUP155O75694 1391 aa17.6■□□□□ 0.41
CPNE8-207ENST00000550863 NUTM2DQ5VT03 806 aaPredicted RBP17.59■□□□□ 0.41
CPNE8-207ENST00000550863 TMEM94Q12767 1356 aa17.58■□□□□ 0.4
CPNE8-207ENST00000550863 NKTRP30414 1462 aaKnown RBP17.57■□□□□ 0.4
CPNE8-207ENST00000550863 CHGAP10645 457 aaKnown RBP17.57■□□□□ 0.4
CPNE8-207ENST00000550863 SLC52A1Q9NWF4 448 aa17.57■□□□□ 0.4
CPNE8-207ENST00000550863 PLEKHG1Q9ULL1 1385 aa17.56■□□□□ 0.4
CPNE8-207ENST00000550863 NAIPQ13075 1403 aa17.55■□□□□ 0.4
CPNE8-207ENST00000550863 KIF1BO60333 1816 aa17.55■□□□□ 0.4
CPNE8-207ENST00000550863 ADAMTS13Q76LX8 1427 aa17.55■□□□□ 0.4
CPNE8-207ENST00000550863 DIP2AQ14689 1571 aa17.53■□□□□ 0.4
CPNE8-207ENST00000550863 BCANQ96GW7 911 aa17.53■□□□□ 0.4
CPNE8-207ENST00000550863 TRPM2O94759 1503 aa17.52■□□□□ 0.4
CPNE8-207ENST00000550863 PPP1R15AO75807 674 aaPredicted RBP17.52■□□□□ 0.4
CPNE8-207ENST00000550863 XRN1Q8IZH2 1706 aaKnown RBP17.52■□□□□ 0.39
CPNE8-207ENST00000550863 PHLPP1O60346 1717 aa17.51■□□□□ 0.39
CPNE8-207ENST00000550863 KCNA6P17658 529 aa17.51■□□□□ 0.39
CPNE8-207ENST00000550863 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.51■□□□□ 0.39
CPNE8-207ENST00000550863 NEXMIFQ5QGS0 1516 aa17.51■□□□□ 0.39
CPNE8-207ENST00000550863 SETD1AO15047 1707 aaKnown RBP17.49■□□□□ 0.39
CPNE8-207ENST00000550863 PTPRUQ92729 1446 aa17.48■□□□□ 0.39
CPNE8-207ENST00000550863 PROSER2Q86WR7 435 aaPredicted RBP17.48■□□□□ 0.39
CPNE8-207ENST00000550863 SETBP1Q9Y6X0 1596 aa17.48■□□□□ 0.39
CPNE8-207ENST00000550863 HFM1A2PYH4 1435 aa17.47■□□□□ 0.39
CPNE8-207ENST00000550863 NALCNQ8IZF0 1738 aa17.46■□□□□ 0.39
CPNE8-207ENST00000550863 PPLO60437 1756 aa17.45■□□□□ 0.38
CPNE8-207ENST00000550863 COL16A1Q07092 1604 aaPredicted RBP17.44■□□□□ 0.38
CPNE8-207ENST00000550863 SOCS7O14512 581 aa17.44■□□□□ 0.38
CPNE8-207ENST00000550863 FAM135BQ49AJ0 1406 aa17.43■□□□□ 0.38
CPNE8-207ENST00000550863 MSH6P52701 1360 aa17.42■□□□□ 0.38
CPNE8-207ENST00000550863 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.4■□□□□ 0.38
CPNE8-207ENST00000550863 IFT172Q9UG01 1749 aa17.39■□□□□ 0.37
CPNE8-207ENST00000550863 TBX22Q9Y458 520 aa17.39■□□□□ 0.37
CPNE8-207ENST00000550863 ZNF326Q5BKZ1 582 aaKnown RBP17.38■□□□□ 0.37
CPNE8-207ENST00000550863 METP08581 1390 aa17.38■□□□□ 0.37
CPNE8-207ENST00000550863 FOXD1Q16676 465 aa17.37■□□□□ 0.37
CPNE8-207ENST00000550863 TRIM52Q96A61 297 aa17.37■□□□□ 0.37
CPNE8-207ENST00000550863 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
CPNE8-207ENST00000550863 PIK3R4Q99570 1358 aa17.35■□□□□ 0.37
CPNE8-207ENST00000550863 AHDC1Q5TGY3 1603 aaPredicted RBP17.35■□□□□ 0.37
CPNE8-207ENST00000550863 HDGFP51858 240 aaKnown RBP17.34■□□□□ 0.37
CPNE8-207ENST00000550863 NHSL1Q5SYE7 1610 aa17.34■□□□□ 0.37
CPNE8-207ENST00000550863 C14orf37Q86TY3 774 aa17.34■□□□□ 0.37
CPNE8-207ENST00000550863 AMOTL2Q9Y2J4 779 aa17.34■□□□□ 0.37
CPNE8-207ENST00000550863 SHPRHQ149N8 1683 aa17.33■□□□□ 0.37
CPNE8-207ENST00000550863 RGS17Q9UGC6 210 aaPredicted RBP17.33■□□□□ 0.36
CPNE8-207ENST00000550863 LRP6O75581 1613 aa17.32■□□□□ 0.36
CPNE8-207ENST00000550863 SLAIN2Q9P270 581 aa17.32■□□□□ 0.36
CPNE8-207ENST00000550863 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
CPNE8-207ENST00000550863 ASXL1Q8IXJ9 1541 aa17.31■□□□□ 0.36
CPNE8-207ENST00000550863 NCOA3Q9Y6Q9 1424 aa17.3■□□□□ 0.36
CPNE8-207ENST00000550863 MST1RQ04912 1400 aa17.29■□□□□ 0.36
CPNE8-207ENST00000550863 ADGRL3Q9HAR2 1447 aa17.27■□□□□ 0.35
CPNE8-207ENST00000550863 DCCP43146 1447 aa17.26■□□□□ 0.35
CPNE8-207ENST00000550863 C19orf44Q9H6X5 657 aa17.25■□□□□ 0.35
CPNE8-207ENST00000550863 BRINP3Q76B58 766 aa17.24■□□□□ 0.35
CPNE8-207ENST00000550863 ROBO2Q9HCK4 1378 aa17.24■□□□□ 0.35
CPNE8-207ENST00000550863 JCADQ9P266 1359 aa17.24■□□□□ 0.35
CPNE8-207ENST00000550863 ATF3P18847 181 aa17.23■□□□□ 0.35
CPNE8-207ENST00000550863 KNDC1Q76NI1 1749 aa17.23■□□□□ 0.35
CPNE8-207ENST00000550863 CCDC144AA2RUR9 1427 aa17.22■□□□□ 0.35
CPNE8-207ENST00000550863 PTCH1Q13635 1447 aa17.22■□□□□ 0.35
CPNE8-207ENST00000550863 SPATA31E1Q6ZUB1 1445 aa17.22■□□□□ 0.35
CPNE8-207ENST00000550863 POTEAQ6S8J7 498 aa17.22■□□□□ 0.35
CPNE8-207ENST00000550863 CADPS2Q86UW7 1296 aa17.22■□□□□ 0.35
CPNE8-207ENST00000550863 DDX17Q92841 729 aaKnown RBP17.22■□□□□ 0.35
CPNE8-207ENST00000550863 ADGRF5Q8IZF2 1346 aa17.2■□□□□ 0.34
CPNE8-207ENST00000550863 LAMC1P11047 1609 aa17.19■□□□□ 0.34
CPNE8-207ENST00000550863 MPHOSPH9Q99550 1183 aa17.18■□□□□ 0.34
CPNE8-207ENST00000550863 PRAG1Q86YV5 1406 aa17.18■□□□□ 0.34
CPNE8-207ENST00000550863 CDC42BPGQ6DT37 1551 aa17.18■□□□□ 0.34
CPNE8-207ENST00000550863 RGPD8O14715 1765 aaPredicted RBP17.17■□□□□ 0.34
CPNE8-207ENST00000550863 SETD5Q9C0A6 1442 aa17.17■□□□□ 0.34
CPNE8-207ENST00000550863 C1orf167Q5SNV9 1468 aa17.17■□□□□ 0.34
CPNE8-207ENST00000550863 RAB3GAP2Q9H2M9 1393 aa17.16■□□□□ 0.34
CPNE8-207ENST00000550863 RGL3Q3MIN7 710 aa17.16■□□□□ 0.34
CPNE8-207ENST00000550863 VGFO15240 615 aaPredicted RBP17.15■□□□□ 0.34
CPNE8-207ENST00000550863 FMN2Q9NZ56 1722 aa17.15■□□□□ 0.34
CPNE8-207ENST00000550863 PIK3C2GO75747 1445 aa17.14■□□□□ 0.33
CPNE8-207ENST00000550863 RPGRIP1LQ68CZ1 1315 aa17.14■□□□□ 0.33
CPNE8-207ENST00000550863 PLEKHH1Q9ULM0 1364 aa17.13■□□□□ 0.33
CPNE8-207ENST00000550863 NUTM2BA6NNL0 878 aaPredicted RBP17.11■□□□□ 0.33
CPNE8-207ENST00000550863 NUTM2EB1AL46 878 aaPredicted RBP17.11■□□□□ 0.33
CPNE8-207ENST00000550863 NUTM2AQ8IVF1 878 aaPredicted RBP17.11■□□□□ 0.33
CPNE8-207ENST00000550863 SPATA31A6Q5VVP1 1343 aa17.11■□□□□ 0.33
CPNE8-207ENST00000550863 PNPLA6Q8IY17 1366 aa17.11■□□□□ 0.33
CPNE8-207ENST00000550863 ORAI2Q96SN7 254 aa17.1■□□□□ 0.33
CPNE8-207ENST00000550863 MEX3CQ5U5Q3 659 aaKnown RBP17.09■□□□□ 0.33
CPNE8-207ENST00000550863 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
CPNE8-207ENST00000550863 STK26Q9P289 416 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms