RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 PPLO60437 1756 aa14.75□□□□□ -0.05
RAB5C-207ENST00000550504 KDM5AP29375 1690 aaKnown RBP14.75□□□□□ -0.05
RAB5C-207ENST00000550504 ZNF142P52746 1687 aaPredicted RBP14.75□□□□□ -0.05
RAB5C-207ENST00000550504 RPGRIP1LQ68CZ1 1315 aa14.75□□□□□ -0.05
RAB5C-207ENST00000550504 NEXMIFQ5QGS0 1516 aa14.75□□□□□ -0.05
RAB5C-207ENST00000550504 IFT172Q9UG01 1749 aa14.75□□□□□ -0.05
RAB5C-207ENST00000550504 RIMS2Q9UQ26 1411 aa14.75□□□□□ -0.05
RAB5C-207ENST00000550504 THEMISQ8N1K5 641 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-207ENST00000550504 SENP3Q9H4L4 574 aaPredicted RBP14.73□□□□□ -0.05
RAB5C-207ENST00000550504 TMEM2Q9UHN6 1383 aa14.73□□□□□ -0.05
RAB5C-207ENST00000550504 ADGRF5Q8IZF2 1346 aa14.72□□□□□ -0.05
RAB5C-207ENST00000550504 NBPF8Q3BBV2 869 aa14.72□□□□□ -0.05
RAB5C-207ENST00000550504 MYOM2P54296 1465 aa14.71□□□□□ -0.05
RAB5C-207ENST00000550504 VGFO15240 615 aaPredicted RBP14.71□□□□□ -0.05
RAB5C-207ENST00000550504 HSPA2P54652 639 aa14.71□□□□□ -0.05
RAB5C-207ENST00000550504 ZFYVE9O95405 1425 aa14.71□□□□□ -0.05
RAB5C-207ENST00000550504 PRAG1Q86YV5 1406 aa14.7□□□□□ -0.06
RAB5C-207ENST00000550504 STRCQ7RTU9 1775 aa14.7□□□□□ -0.06
RAB5C-207ENST00000550504 HDGFP51858 240 aaKnown RBP14.69□□□□□ -0.06
RAB5C-207ENST00000550504 TXNDC2Q86VQ3 553 aa14.69□□□□□ -0.06
RAB5C-207ENST00000550504 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.69□□□□□ -0.06
RAB5C-207ENST00000550504 STAC3Q96MF2 364 aa14.69□□□□□ -0.06
RAB5C-207ENST00000550504 EID1Q9Y6B2 187 aa14.69□□□□□ -0.06
RAB5C-207ENST00000550504 ARHGAP23Q9P227 1491 aa14.69□□□□□ -0.06
RAB5C-207ENST00000550504 SLIT1O75093 1534 aa14.68□□□□□ -0.06
RAB5C-207ENST00000550504 LTKP29376 864 aa14.68□□□□□ -0.06
RAB5C-207ENST00000550504 BCANQ96GW7 911 aa14.67□□□□□ -0.06
RAB5C-207ENST00000550504 NRXN1Q9ULB1 1477 aa14.67□□□□□ -0.06
RAB5C-207ENST00000550504 CERKQ8TCT0 537 aa14.66□□□□□ -0.06
RAB5C-207ENST00000550504 PIK3C2GO75747 1445 aa14.66□□□□□ -0.06
RAB5C-207ENST00000550504 SCAF11Q99590 1463 aaKnown RBP14.65□□□□□ -0.06
RAB5C-207ENST00000550504 CFAP70Q5T0N1 1121 aa14.65□□□□□ -0.06
RAB5C-207ENST00000550504 ANKLE2Q86XL3 938 aa14.65□□□□□ -0.06
RAB5C-207ENST00000550504 TRPM1Q7Z4N2 1603 aa14.64□□□□□ -0.07
RAB5C-207ENST00000550504 RALGAPBQ86X10 1494 aa14.63□□□□□ -0.07
RAB5C-207ENST00000550504 NBPF1Q3BBV0 1214 aa14.63□□□□□ -0.07
RAB5C-207ENST00000550504 NCKAP5LQ9HCH0 1330 aa14.63□□□□□ -0.07
RAB5C-207ENST00000550504 ROCK2O75116 1388 aaKnown RBP14.62□□□□□ -0.07
RAB5C-207ENST00000550504 PLEKHG1Q9ULL1 1385 aa14.62□□□□□ -0.07
RAB5C-207ENST00000550504 IQGAP1P46940 1657 aa14.61□□□□□ -0.07
RAB5C-207ENST00000550504 C14orf93Q9H972 538 aaKnown RBP14.61□□□□□ -0.07
RAB5C-207ENST00000550504 ALKQ9UM73 1620 aa14.6□□□□□ -0.07
RAB5C-207ENST00000550504 NRXN3Q9Y4C0 1643 aa14.6□□□□□ -0.07
RAB5C-207ENST00000550504 POLR1AO95602 1720 aaPredicted RBP14.6□□□□□ -0.07
RAB5C-207ENST00000550504 KIAA1210Q9ULL0 1709 aa14.6□□□□□ -0.07
RAB5C-207ENST00000550504 SETBP1Q9Y6X0 1596 aa14.6□□□□□ -0.07
RAB5C-207ENST00000550504 TMEM132EQ6IEE7 984 aa14.59□□□□□ -0.07
RAB5C-207ENST00000550504 SLC26A8Q96RN1 970 aa14.59□□□□□ -0.07
RAB5C-207ENST00000550504 CARD11Q9BXL7 1154 aa14.59□□□□□ -0.07
RAB5C-207ENST00000550504 LAMC1P11047 1609 aa14.59□□□□□ -0.07
RAB5C-207ENST00000550504 NPHP4O75161 1426 aaPredicted RBP14.58□□□□□ -0.08
RAB5C-207ENST00000550504 ADAMTS13Q76LX8 1427 aa14.58□□□□□ -0.08
RAB5C-207ENST00000550504 ASXL1Q8IXJ9 1541 aa14.56□□□□□ -0.08
RAB5C-207ENST00000550504 GPRASP1Q5JY77 1395 aa14.56□□□□□ -0.08
RAB5C-207ENST00000550504 ADGRB1O14514 1584 aa14.56□□□□□ -0.08
RAB5C-207ENST00000550504 LTBP4Q8N2S1 1624 aa14.55□□□□□ -0.08
RAB5C-207ENST00000550504 SETD1AO15047 1707 aaKnown RBP14.55□□□□□ -0.08
RAB5C-207ENST00000550504 METP08581 1390 aa14.55□□□□□ -0.08
RAB5C-207ENST00000550504 MED14O60244 1454 aa14.55□□□□□ -0.08
RAB5C-207ENST00000550504 STK26Q9P289 416 aa14.54□□□□□ -0.08
RAB5C-207ENST00000550504 USP47Q96K76 1375 aa14.53□□□□□ -0.08
RAB5C-207ENST00000550504 HIRIP3Q9BW71 556 aaPredicted RBP14.53□□□□□ -0.08
RAB5C-207ENST00000550504 TBX22Q9Y458 520 aa14.53□□□□□ -0.08
RAB5C-207ENST00000550504 DIP2AQ14689 1571 aa14.52□□□□□ -0.08
RAB5C-207ENST00000550504 HSPA5P11021 654 aaKnown RBP14.52□□□□□ -0.09
RAB5C-207ENST00000550504 EIF4G2P78344 907 aaKnown RBP eCLIP14.52□□□□□ -0.09
RAB5C-207ENST00000550504 TRAK1Q9UPV9 953 aa14.52□□□□□ -0.09
RAB5C-207ENST00000550504 YTHDC2Q9H6S0 1430 aaKnown RBP14.51□□□□□ -0.09
RAB5C-207ENST00000550504 ILDR2Q71H61 639 aa14.51□□□□□ -0.09
RAB5C-207ENST00000550504 IQSEC2Q5JU85 1478 aa14.5□□□□□ -0.09
RAB5C-207ENST00000550504 LRPPRCP42704 1394 aaKnown RBP14.49□□□□□ -0.09
RAB5C-207ENST00000550504 DMRT2Q9Y5R5 561 aa14.49□□□□□ -0.09
RAB5C-207ENST00000550504 PTPRUQ92729 1446 aa14.49□□□□□ -0.09
RAB5C-207ENST00000550504 ST20-MTHFSA0A0A6YYL1 179 aa14.48□□□□□ -0.09
RAB5C-207ENST00000550504 EIF3AQ14152 1382 aaKnown RBP14.47□□□□□ -0.09
RAB5C-207ENST00000550504 AMOTL2Q9Y2J4 779 aa14.47□□□□□ -0.09
RAB5C-207ENST00000550504 ARHGEF28Q8N1W1 1705 aaKnown RBP14.46□□□□□ -0.09
RAB5C-207ENST00000550504 ABCC11Q96J66 1382 aa14.46□□□□□ -0.1
RAB5C-207ENST00000550504 PIK3R4Q99570 1358 aa14.46□□□□□ -0.1
RAB5C-207ENST00000550504 SOCS7O14512 581 aa14.45□□□□□ -0.1
RAB5C-207ENST00000550504 SAFB2Q14151 953 aaKnown RBP eCLIP14.45□□□□□ -0.1
RAB5C-207ENST00000550504 PRAM1Q96QH2 718 aa14.45□□□□□ -0.1
RAB5C-207ENST00000550504 POGKQ9P215 609 aa14.45□□□□□ -0.1
RAB5C-207ENST00000550504 CENPJQ9HC77 1338 aaPredicted RBP14.44□□□□□ -0.1
RAB5C-207ENST00000550504 KNDC1Q76NI1 1749 aa14.44□□□□□ -0.1
RAB5C-207ENST00000550504 CHD2O14647 1828 aaKnown RBP14.44□□□□□ -0.1
RAB5C-207ENST00000550504 KCNA6P17658 529 aa14.44□□□□□ -0.1
RAB5C-207ENST00000550504 WAPLQ7Z5K2 1190 aa14.44□□□□□ -0.1
RAB5C-207ENST00000550504 DLC1Q96QB1 1528 aa14.44□□□□□ -0.1
RAB5C-207ENST00000550504 XRN1Q8IZH2 1706 aaKnown RBP14.44□□□□□ -0.1
RAB5C-207ENST00000550504 TECPR2O15040 1411 aa14.43□□□□□ -0.1
RAB5C-207ENST00000550504 CPS1P31327 1500 aa14.43□□□□□ -0.1
RAB5C-207ENST00000550504 ZNF316A6NFI3 1004 aaPredicted RBP14.43□□□□□ -0.1
RAB5C-207ENST00000550504 ROBO2Q9HCK4 1378 aa14.43□□□□□ -0.1
RAB5C-207ENST00000550504 DISP3Q9P2K9 1392 aa14.43□□□□□ -0.1
RAB5C-207ENST00000550504 PLEKHH1Q9ULM0 1364 aa14.43□□□□□ -0.1
RAB5C-207ENST00000550504 QRICH2Q9H0J4 1663 aa14.42□□□□□ -0.1
RAB5C-207ENST00000550504 TESK2Q96S53 571 aa14.41□□□□□ -0.1
RAB5C-207ENST00000550504 FAM135BQ49AJ0 1406 aa14.41□□□□□ -0.1
RAB5C-207ENST00000550504 MINK1Q8N4C8 1332 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms