RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 RSPH4AQ5TD94 716 aa19.45■□□□□ 0.7
RBFOX1-212ENST00000550418 BRD4O60885 1362 aaPredicted RBP19.45■□□□□ 0.7
RBFOX1-212ENST00000550418 STK31Q9BXU1 1019 aa19.45■□□□□ 0.7
RBFOX1-212ENST00000550418 DZIP1LQ8IYY4 767 aaKnown RBP19.44■□□□□ 0.7
RBFOX1-212ENST00000550418 NCOA2Q15596 1464 aa19.44■□□□□ 0.7
RBFOX1-212ENST00000550418 AAMPQ13685 434 aa19.44■□□□□ 0.7
RBFOX1-212ENST00000550418 CDCA7LQ96GN5 454 aa19.44■□□□□ 0.7
RBFOX1-212ENST00000550418 SLC4A10Q6U841 1118 aa19.43■□□□□ 0.7
RBFOX1-212ENST00000550418 FAM69CQ0P6D2 419 aa19.43■□□□□ 0.7
RBFOX1-212ENST00000550418 REC8O95072 547 aa19.42■□□□□ 0.7
RBFOX1-212ENST00000550418 MCTP1Q6DN14 999 aa19.41■□□□□ 0.7
RBFOX1-212ENST00000550418 GOLGA6L19H0YKK7 550 aa19.41■□□□□ 0.7
RBFOX1-212ENST00000550418 CCDC144AA2RUR9 1427 aa19.4■□□□□ 0.7
RBFOX1-212ENST00000550418 LMOD3Q0VAK6 560 aa19.4■□□□□ 0.7
RBFOX1-212ENST00000550418 TERF2IPQ9NYB0 399 aa19.4■□□□□ 0.7
RBFOX1-212ENST00000550418 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.7
RBFOX1-212ENST00000550418 RRP9O43818 475 aaKnown RBP19.39■□□□□ 0.7
RBFOX1-212ENST00000550418 PANK1Q8TE04 598 aa19.39■□□□□ 0.69
RBFOX1-212ENST00000550418 SMG6Q86US8 1419 aaKnown RBP19.39■□□□□ 0.69
RBFOX1-212ENST00000550418 PEG3Q9GZU2 1588 aa19.39■□□□□ 0.69
RBFOX1-212ENST00000550418 ZNF592Q92610 1267 aa19.39■□□□□ 0.69
RBFOX1-212ENST00000550418 GPATCH3Q96I76 525 aa19.39■□□□□ 0.69
RBFOX1-212ENST00000550418 BECN2A8MW95 431 aa19.38■□□□□ 0.69
RBFOX1-212ENST00000550418 ISY1Q9ULR0 285 aaKnown RBP19.38■□□□□ 0.69
RBFOX1-212ENST00000550418 CCDC39Q9UFE4 941 aa19.38■□□□□ 0.69
RBFOX1-212ENST00000550418 PRDM2Q13029 1718 aa19.38■□□□□ 0.69
RBFOX1-212ENST00000550418 HSP90B1P14625 803 aaKnown RBP19.37■□□□□ 0.69
RBFOX1-212ENST00000550418 MRC2Q9UBG0 1479 aa19.37■□□□□ 0.69
RBFOX1-212ENST00000550418 ELL2O00472 640 aaPredicted RBP19.37■□□□□ 0.69
RBFOX1-212ENST00000550418 RILPL2Q969X0 211 aa19.37■□□□□ 0.69
RBFOX1-212ENST00000550418 LNPKQ9C0E8 428 aa19.36■□□□□ 0.69
RBFOX1-212ENST00000550418 DNMBPQ6XZF7 1577 aa19.35■□□□□ 0.69
RBFOX1-212ENST00000550418 CCDC173Q0VFZ6 552 aa19.35■□□□□ 0.69
RBFOX1-212ENST00000550418 DIAPH3Q9NSV4 1193 aa19.35■□□□□ 0.69
RBFOX1-212ENST00000550418 WASHC2CQ9Y4E1 1318 aa19.35■□□□□ 0.69
RBFOX1-212ENST00000550418 CCDC184Q52MB2 194 aa19.35■□□□□ 0.69
RBFOX1-212ENST00000550418 KIF3AQ9Y496 699 aa19.35■□□□□ 0.69
RBFOX1-212ENST00000550418 FYCO1Q9BQS8 1478 aa19.35■□□□□ 0.69
RBFOX1-212ENST00000550418 CHMP4AQ9BY43 222 aa19.34■□□□□ 0.69
RBFOX1-212ENST00000550418 CCDC34Q96HJ3 373 aa19.34■□□□□ 0.69
RBFOX1-212ENST00000550418 ADAMTS8Q9UP79 889 aa19.34■□□□□ 0.69
RBFOX1-212ENST00000550418 TULP1O00294 542 aaPredicted RBP19.34■□□□□ 0.69
RBFOX1-212ENST00000550418 PNISRQ8TF01 805 aaKnown RBP19.34■□□□□ 0.69
RBFOX1-212ENST00000550418 ESPNB1AK53 854 aa19.33■□□□□ 0.69
RBFOX1-212ENST00000550418 RBM10P98175 930 aaKnown RBP19.33■□□□□ 0.69
RBFOX1-212ENST00000550418 A0A0U1RQG5 324 aaPredicted RBP19.33■□□□□ 0.69
RBFOX1-212ENST00000550418 HDAC5Q9UQL6 1122 aa19.33■□□□□ 0.68
RBFOX1-212ENST00000550418 SF3A1Q15459 793 aaKnown RBP19.33■□□□□ 0.68
RBFOX1-212ENST00000550418 GRPEL1Q9HAV7 217 aa19.32■□□□□ 0.68
RBFOX1-212ENST00000550418 RNF214Q8ND24 703 aa19.32■□□□□ 0.68
RBFOX1-212ENST00000550418 EID1Q9Y6B2 187 aa19.31■□□□□ 0.68
RBFOX1-212ENST00000550418 CAVIN1Q6NZI2 390 aaKnown RBP19.31■□□□□ 0.68
RBFOX1-212ENST00000550418 GPS2Q13227 327 aa19.31■□□□□ 0.68
RBFOX1-212ENST00000550418 TEX35Q5T0J7 233 aa19.3■□□□□ 0.68
RBFOX1-212ENST00000550418 ABCA10Q8WWZ4 1543 aa19.29■□□□□ 0.68
RBFOX1-212ENST00000550418 INTS3Q68E01 1043 aaKnown RBP19.29■□□□□ 0.68
RBFOX1-212ENST00000550418 HMGN5P82970 282 aaKnown RBP19.29■□□□□ 0.68
RBFOX1-212ENST00000550418 CCAR2Q8N163 923 aaKnown RBP19.29■□□□□ 0.68
RBFOX1-212ENST00000550418 RUNDC1Q96C34 613 aa19.29■□□□□ 0.68
RBFOX1-212ENST00000550418 TRAK1Q9UPV9 953 aa19.29■□□□□ 0.68
RBFOX1-212ENST00000550418 SNAPC4Q5SXM2 1469 aa19.29■□□□□ 0.68
RBFOX1-212ENST00000550418 H3BQV1 296 aa19.29■□□□□ 0.68
RBFOX1-212ENST00000550418 IFFO2Q5TF58 517 aa19.29■□□□□ 0.68
RBFOX1-212ENST00000550418 PRG4Q92954 1404 aaPredicted RBP19.28■□□□□ 0.68
RBFOX1-212ENST00000550418 TPM3P06753 285 aa19.28■□□□□ 0.68
RBFOX1-212ENST00000550418 PDZRN3Q9UPQ7 1066 aa19.28■□□□□ 0.68
RBFOX1-212ENST00000550418 MCM4P33991 863 aa19.28■□□□□ 0.68
RBFOX1-212ENST00000550418 AFAP1Q8N556 730 aa19.28■□□□□ 0.68
RBFOX1-212ENST00000550418 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
RBFOX1-212ENST00000550418 PDE3AQ14432 1141 aa19.27■□□□□ 0.68
RBFOX1-212ENST00000550418 IFT57Q9NWB7 429 aa19.27■□□□□ 0.68
RBFOX1-212ENST00000550418 NOC3LQ8WTT2 800 aaKnown RBP19.27■□□□□ 0.68
RBFOX1-212ENST00000550418 TIAM1Q13009 1591 aa19.26■□□□□ 0.67
RBFOX1-212ENST00000550418 MIA2Q96PC5 1412 aa19.26■□□□□ 0.67
RBFOX1-212ENST00000550418 MBD3O95983 291 aa19.26■□□□□ 0.67
RBFOX1-212ENST00000550418 API5Q9BZZ5 524 aaKnown RBP19.26■□□□□ 0.67
RBFOX1-212ENST00000550418 CHMP3Q9Y3E7 222 aa19.26■□□□□ 0.67
RBFOX1-212ENST00000550418 FAM184AQ8NB25 1140 aa19.25■□□□□ 0.67
RBFOX1-212ENST00000550418 ANO2Q9NQ90 1003 aa19.25■□□□□ 0.67
RBFOX1-212ENST00000550418 CDC45O75419 566 aa19.25■□□□□ 0.67
RBFOX1-212ENST00000550418 ANKRD50Q9ULJ7 1429 aa19.25■□□□□ 0.67
RBFOX1-212ENST00000550418 EFCAB5A4FU69 1503 aa19.24■□□□□ 0.67
RBFOX1-212ENST00000550418 WDR97A6NE52 1622 aa19.23■□□□□ 0.67
RBFOX1-212ENST00000550418 SETQ01105 290 aaPredicted RBP19.23■□□□□ 0.67
RBFOX1-212ENST00000550418 HOMER1Q86YM7 354 aa19.23■□□□□ 0.67
RBFOX1-212ENST00000550418 URB2Q14146 1524 aaKnown RBP19.21■□□□□ 0.67
RBFOX1-212ENST00000550418 PRPF40AO75400 957 aaKnown RBP19.21■□□□□ 0.67
RBFOX1-212ENST00000550418 RIPK4P57078 832 aa19.21■□□□□ 0.67
RBFOX1-212ENST00000550418 BICD2Q8TD16 824 aa19.21■□□□□ 0.67
RBFOX1-212ENST00000550418 UBE2Q2Q8WVN8 375 aa19.21■□□□□ 0.67
RBFOX1-212ENST00000550418 SMC3Q9UQE7 1217 aa19.21■□□□□ 0.67
RBFOX1-212ENST00000550418 ZKSCAN1P17029 563 aaPredicted RBP19.21■□□□□ 0.67
RBFOX1-212ENST00000550418 CCDC66A2RUB6 948 aa19.2■□□□□ 0.66
RBFOX1-212ENST00000550418 VPS37CA5D8V6 355 aaPredicted RBP19.2■□□□□ 0.66
RBFOX1-212ENST00000550418 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.2■□□□□ 0.66
RBFOX1-212ENST00000550418 ARGLU1Q9NWB6 273 aaPredicted RBP19.2■□□□□ 0.66
RBFOX1-212ENST00000550418 RUFY2Q8WXA3 655 aa19.2■□□□□ 0.66
RBFOX1-212ENST00000550418 PODXL2Q9NZ53 605 aa19.2■□□□□ 0.66
RBFOX1-212ENST00000550418 CDK13Q14004 1512 aaKnown RBP19.19■□□□□ 0.66
RBFOX1-212ENST00000550418 SASS6Q6UVJ0 657 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms