RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 NCKAP5LQ9HCH0 1330 aa19.05■□□□□ 0.64
RAB5C-206ENST00000550406 RIMS2Q9UQ26 1411 aa19.05■□□□□ 0.64
RAB5C-206ENST00000550406 RGL3Q3MIN7 710 aa19.04■□□□□ 0.64
RAB5C-206ENST00000550406 ZNF326Q5BKZ1 582 aaKnown RBP19.03■□□□□ 0.64
RAB5C-206ENST00000550406 NUTM2DQ5VT03 806 aaPredicted RBP19.02■□□□□ 0.64
RAB5C-206ENST00000550406 TXNDC2Q86VQ3 553 aa19.02■□□□□ 0.64
RAB5C-206ENST00000550406 ANKLE2Q86XL3 938 aa19.02■□□□□ 0.64
RAB5C-206ENST00000550406 NEUROD1Q13562 356 aa19.01■□□□□ 0.63
RAB5C-206ENST00000550406 SCAF11Q99590 1463 aaKnown RBP19.01■□□□□ 0.63
RAB5C-206ENST00000550406 RPGRIP1LQ68CZ1 1315 aa19■□□□□ 0.63
RAB5C-206ENST00000550406 MED14O60244 1454 aa18.99■□□□□ 0.63
RAB5C-206ENST00000550406 CCER1Q8TC90 406 aaPredicted RBP18.99■□□□□ 0.63
RAB5C-206ENST00000550406 EID1Q9Y6B2 187 aa18.98■□□□□ 0.63
RAB5C-206ENST00000550406 IQGAP1P46940 1657 aa18.97■□□□□ 0.63
RAB5C-206ENST00000550406 CLSPNQ9HAW4 1339 aa18.97■□□□□ 0.63
RAB5C-206ENST00000550406 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.96■□□□□ 0.63
RAB5C-206ENST00000550406 NRXN3Q9Y4C0 1643 aa18.96■□□□□ 0.63
RAB5C-206ENST00000550406 NPHP4O75161 1426 aaPredicted RBP18.95■□□□□ 0.62
RAB5C-206ENST00000550406 HDGFP51858 240 aaKnown RBP18.95■□□□□ 0.62
RAB5C-206ENST00000550406 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
RAB5C-206ENST00000550406 ADGRF5Q8IZF2 1346 aa18.94■□□□□ 0.62
RAB5C-206ENST00000550406 PLEKHG1Q9ULL1 1385 aa18.93■□□□□ 0.62
RAB5C-206ENST00000550406 L3MBTL2Q969R5 705 aa18.93■□□□□ 0.62
RAB5C-206ENST00000550406 VGFO15240 615 aaPredicted RBP18.92■□□□□ 0.62
RAB5C-206ENST00000550406 PPP1R15AO75807 674 aaPredicted RBP18.92■□□□□ 0.62
RAB5C-206ENST00000550406 DCAF11Q8TEB1 546 aa18.92■□□□□ 0.62
RAB5C-206ENST00000550406 SETD1AO15047 1707 aaKnown RBP18.91■□□□□ 0.62
RAB5C-206ENST00000550406 MYOM2P54296 1465 aa18.91■□□□□ 0.62
RAB5C-206ENST00000550406 NRXN1Q9ULB1 1477 aa18.91■□□□□ 0.62
RAB5C-206ENST00000550406 SETBP1Q9Y6X0 1596 aa18.91■□□□□ 0.62
RAB5C-206ENST00000550406 ADAMTS13Q76LX8 1427 aa18.91■□□□□ 0.62
RAB5C-206ENST00000550406 KDM2AQ9Y2K7 1162 aa18.9■□□□□ 0.62
RAB5C-206ENST00000550406 SLC26A8Q96RN1 970 aa18.88■□□□□ 0.61
RAB5C-206ENST00000550406 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
RAB5C-206ENST00000550406 PIK3C2GO75747 1445 aa18.87■□□□□ 0.61
RAB5C-206ENST00000550406 ALKQ9UM73 1620 aa18.87■□□□□ 0.61
RAB5C-206ENST00000550406 STRCP1A6NGW2 1772 aa18.86■□□□□ 0.61
RAB5C-206ENST00000550406 TONSLQ96HA7 1378 aa18.85■□□□□ 0.61
RAB5C-206ENST00000550406 STAC3Q96MF2 364 aa18.85■□□□□ 0.61
RAB5C-206ENST00000550406 TBX22Q9Y458 520 aa18.85■□□□□ 0.61
RAB5C-206ENST00000550406 CHD2O14647 1828 aaKnown RBP18.85■□□□□ 0.61
RAB5C-206ENST00000550406 BCANQ96GW7 911 aa18.84■□□□□ 0.61
RAB5C-206ENST00000550406 DIP2AQ14689 1571 aa18.84■□□□□ 0.61
RAB5C-206ENST00000550406 PRAG1Q86YV5 1406 aa18.82■□□□□ 0.6
RAB5C-206ENST00000550406 METP08581 1390 aa18.81■□□□□ 0.6
RAB5C-206ENST00000550406 ASXL1Q8IXJ9 1541 aa18.81■□□□□ 0.6
RAB5C-206ENST00000550406 NBPF8Q3BBV2 869 aa18.81■□□□□ 0.6
RAB5C-206ENST00000550406 CFAP70Q5T0N1 1121 aa18.81■□□□□ 0.6
RAB5C-206ENST00000550406 C14orf93Q9H972 538 aaKnown RBP18.81■□□□□ 0.6
RAB5C-206ENST00000550406 PTPRUQ92729 1446 aa18.8■□□□□ 0.6
RAB5C-206ENST00000550406 KIAA1210Q9ULL0 1709 aa18.8■□□□□ 0.6
RAB5C-206ENST00000550406 LAMC1P11047 1609 aa18.79■□□□□ 0.6
RAB5C-206ENST00000550406 TIMELESSQ9UNS1 1208 aa18.79■□□□□ 0.6
RAB5C-206ENST00000550406 ZNF335Q9H4Z2 1342 aaPredicted RBP18.78■□□□□ 0.6
RAB5C-206ENST00000550406 TRPM1Q7Z4N2 1603 aa18.78■□□□□ 0.6
RAB5C-206ENST00000550406 LTBP4Q8N2S1 1624 aa18.77■□□□□ 0.6
RAB5C-206ENST00000550406 NWD1Q149M9 1564 aa18.76■□□□□ 0.59
RAB5C-206ENST00000550406 TMEM132EQ6IEE7 984 aa18.76■□□□□ 0.59
RAB5C-206ENST00000550406 XRN1Q8IZH2 1706 aaKnown RBP18.76■□□□□ 0.59
RAB5C-206ENST00000550406 ADGRB1O14514 1584 aa18.76■□□□□ 0.59
RAB5C-206ENST00000550406 NBPF1Q3BBV0 1214 aa18.75■□□□□ 0.59
RAB5C-206ENST00000550406 PIK3R4Q99570 1358 aa18.75■□□□□ 0.59
RAB5C-206ENST00000550406 KCNA6P17658 529 aa18.74■□□□□ 0.59
RAB5C-206ENST00000550406 XIRP1Q702N8 1843 aaKnown RBP18.73■□□□□ 0.59
RAB5C-206ENST00000550406 AMOTL2Q9Y2J4 779 aa18.72■□□□□ 0.59
RAB5C-206ENST00000550406 KNDC1Q76NI1 1749 aa18.71■□□□□ 0.59
RAB5C-206ENST00000550406 YTHDC2Q9H6S0 1430 aaKnown RBP18.7■□□□□ 0.58
RAB5C-206ENST00000550406 LRPPRCP42704 1394 aaKnown RBP18.69■□□□□ 0.58
RAB5C-206ENST00000550406 RALGAPBQ86X10 1494 aa18.67■□□□□ 0.58
RAB5C-206ENST00000550406 STK26Q9P289 416 aa18.67■□□□□ 0.58
RAB5C-206ENST00000550406 CPS1P31327 1500 aa18.67■□□□□ 0.58
RAB5C-206ENST00000550406 LRRC7Q96NW7 1537 aa18.67■□□□□ 0.58
RAB5C-206ENST00000550406 ABCC11Q96J66 1382 aa18.67■□□□□ 0.58
RAB5C-206ENST00000550406 TECPR2O15040 1411 aa18.66■□□□□ 0.58
RAB5C-206ENST00000550406 NKTRP30414 1462 aaKnown RBP18.66■□□□□ 0.58
RAB5C-206ENST00000550406 ROBO2Q9HCK4 1378 aa18.66■□□□□ 0.58
RAB5C-206ENST00000550406 RBM33Q96EV2 1170 aaKnown RBP18.65■□□□□ 0.58
RAB5C-206ENST00000550406 ARHGEF28Q8N1W1 1705 aaKnown RBP18.65■□□□□ 0.58
RAB5C-206ENST00000550406 GPRASP1Q5JY77 1395 aa18.65■□□□□ 0.58
RAB5C-206ENST00000550406 PROSER2Q86WR7 435 aaPredicted RBP18.63■□□□□ 0.57
RAB5C-206ENST00000550406 TRAK1Q9UPV9 953 aa18.63■□□□□ 0.57
RAB5C-206ENST00000550406 ROCK2O75116 1388 aaKnown RBP18.63■□□□□ 0.57
RAB5C-206ENST00000550406 PTCH1Q13635 1447 aa18.63■□□□□ 0.57
RAB5C-206ENST00000550406 DLC1Q96QB1 1528 aa18.63■□□□□ 0.57
RAB5C-206ENST00000550406 PLEKHH1Q9ULM0 1364 aa18.62■□□□□ 0.57
RAB5C-206ENST00000550406 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.61■□□□□ 0.57
RAB5C-206ENST00000550406 WAPLQ7Z5K2 1190 aa18.61■□□□□ 0.57
RAB5C-206ENST00000550406 SIRT1Q96EB6 747 aa18.61■□□□□ 0.57
RAB5C-206ENST00000550406 TMEM94Q12767 1356 aa18.6■□□□□ 0.57
RAB5C-206ENST00000550406 FAM135BQ49AJ0 1406 aa18.59■□□□□ 0.57
RAB5C-206ENST00000550406 NALCNQ8IZF0 1738 aa18.59■□□□□ 0.57
RAB5C-206ENST00000550406 CERKQ8TCT0 537 aa18.58■□□□□ 0.56
RAB5C-206ENST00000550406 CARD11Q9BXL7 1154 aa18.57■□□□□ 0.56
RAB5C-206ENST00000550406 PRAM1Q96QH2 718 aa18.56■□□□□ 0.56
RAB5C-206ENST00000550406 NCOA3Q9Y6Q9 1424 aa18.56■□□□□ 0.56
RAB5C-206ENST00000550406 QRICH2Q9H0J4 1663 aa18.54■□□□□ 0.56
RAB5C-206ENST00000550406 IQSEC2Q5JU85 1478 aa18.53■□□□□ 0.56
RAB5C-206ENST00000550406 SAFB2Q14151 953 aaKnown RBP eCLIP18.53■□□□□ 0.56
RAB5C-206ENST00000550406 ADGRL3Q9HAR2 1447 aa18.52■□□□□ 0.56
RAB5C-206ENST00000550406 POGKQ9P215 609 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms